Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 03:38:55 (22416): vboxwrapper version 26210
2025-10-12 03:38:55 (22416): BOINC client version: 8.0.2
2025-10-12 03:38:56 (22416): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 03:38:56 (22416): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 03:38:56 (22416): Create VM. (boinc_eb4e738ac50cc917, slot#2)
2025-10-12 03:38:57 (22416): Setting Memory Size for VM. (4100MB)
2025-10-12 03:38:57 (22416): Setting CPU Count for VM. (1)
2025-10-12 03:38:58 (22416): Setting Chipset Options for VM.
2025-10-12 03:38:58 (22416): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 03:38:59 (22416): Setting Boot Options for VM.
2025-10-12 03:38:59 (22416): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 03:38:59 (22416): Enabling VM Network Access.
2025-10-12 03:39:00 (22416): Disabling USB Support for VM.
2025-10-12 03:39:00 (22416): Disabling COM Port Support for VM.
2025-10-12 03:39:01 (22416): Disabling LPT Port Support for VM.
2025-10-12 03:39:01 (22416): Disabling Audio Support for VM.
2025-10-12 03:39:01 (22416): Disabling Clipboard Support for VM.
2025-10-12 03:39:01 (22416): Disabling Drag and Drop Support for VM.
2025-10-12 03:39:02 (22416): Adding storage controller(s) to VM.
2025-10-12 03:39:02 (22416): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 03:39:05 (22416): Adding VirtualBox Guest Additions to VM.
2025-10-12 03:39:05 (22416): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 03:39:05 (22416): forwarding host port 64568 to guest port 80
2025-10-12 03:39:06 (22416): Enabling remote desktop for VM.
2025-10-12 03:39:06 (22416): Required extension pack not installed, remote desktop not enabled.
2025-10-12 03:39:06 (22416): Enabling shared directory for VM.
2025-10-12 03:39:06 (22416): Starting VM using VBoxManage interface. (boinc_eb4e738ac50cc917, slot#2)
2025-10-12 03:39:13 (22416): Successfully started VM. (PID = '6224')
2025-10-12 03:39:13 (22416): Reporting VM Process ID to BOINC.
2025-10-12 03:39:13 (22416): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 03:39:13 (22416): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 03:39:13 (22416): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 03:39:13 (22416): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 03:39:13 (22416): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 03:39:13 (22416): Detected: Web Application Enabled (http://localhost:64568)
2025-10-12 03:39:13 (22416): Preference change detected
2025-10-12 03:39:13 (22416): Setting CPU throttle for VM. (100%)
2025-10-12 03:39:13 (22416): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 03:39:15 (22416): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 03:39:15 (22416): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 03:39:18 (22416): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 03:39:18 (22416): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 03:39:18 (22416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 03:39:24 (22416): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 03:39:24 (22416): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 03:39:45 (22416): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000531 main     Log opened 2025-10-12T03:39:42.327193000Z
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000817 main     OS Product: Linux
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000855 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000882 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000909 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000909 main     Process ID: 1262
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.000910 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 03:39:45 (22416): Guest Log: 00:00:00.003262 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 03:39:45 (22416): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 03:39:45 (22416): Guest Log: [INFO] Mounting shared directory
2025-10-12 03:39:45 (22416): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 03:39:50 (22416): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 03:39:50 (22416): Guest Log: [INFO] Detected branch: prod
2025-10-12 03:39:50 (22416): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 03:39:50 (22416): Guest Log: Copying input files
2025-10-12 03:39:52 (22416): Guest Log: Copied input files into RunAtlas.
2025-10-12 03:39:52 (22416): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 03:39:52 (22416): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 03:39:52 (22416): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 03:39:52 (22416): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 03:39:55 (22416): Guest Log: 00:00:10.025812 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 135 373 000ns (GuestNow=1 760 233 194 216 558 000 ns GuestLast=1 760 240 382 351 931 000 ns fSetTimeLastLoop=true )
2025-10-12 03:40:00 (22416): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 03:40:01 (22416): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 03:40:01 (22416): Guest Log: 2.6.3.0 1531 0 30084 151602 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 03:40:11 (22416): Guest Log: copied the webapp to /var/www
2025-10-12 03:40:11 (22416): Guest Log: core_number=1
2025-10-12 03:40:12 (22416): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 03:40:12 (22416): Guest Log:  *** Starting ATLAS job. (PandaID=6838990872 taskID=46676269) ***
2025-10-12 05:21:58 (22416): Status Report: Elapsed Time: '6000.000000'
2025-10-12 05:21:58 (22416): Status Report: CPU Time: '5847.453125'
2025-10-12 07:03:09 (22416): Status Report: Elapsed Time: '12000.000000'
2025-10-12 07:03:09 (22416): Status Report: CPU Time: '11903.734375'
2025-10-12 08:44:14 (22416): Status Report: Elapsed Time: '18000.000000'
2025-10-12 08:44:14 (22416): Status Report: CPU Time: '17961.593750'
2025-10-12 10:25:14 (22416): Status Report: Elapsed Time: '24000.000000'
2025-10-12 10:25:14 (22416): Status Report: CPU Time: '24018.515625'
2025-10-12 12:06:20 (22416): Status Report: Elapsed Time: '30000.000000'
2025-10-12 12:06:20 (22416): Status Report: CPU Time: '30082.218750'
2025-10-12 13:47:49 (22416): Status Report: Elapsed Time: '36000.000000'
2025-10-12 13:47:49 (22416): Status Report: CPU Time: '36125.828125'
2025-10-12 15:28:55 (22416): Status Report: Elapsed Time: '42000.000000'
2025-10-12 15:28:55 (22416): Status Report: CPU Time: '42189.281250'
2025-10-12 17:10:01 (22416): Status Report: Elapsed Time: '48000.000000'
2025-10-12 17:10:01 (22416): Status Report: CPU Time: '48245.484375'
2025-10-12 18:37:15 (22416): Guest Log:  *** Job finished ***
2025-10-12 18:37:15 (22416): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:36:54,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:36:54,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:07,210 | INFO     | [monitor] cgroup control has ended
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:08,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683082401600)>', '<ExcThread(monitor, started 139682629265152)>']
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:08,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:08,880 | INFO     | [monitor] control thread has ended
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,801 | INFO     | all workflow threads have been joined
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,801 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,802 | INFO     | traces error code: 0
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,960 [wrapper] ==== pilot stdout END ====
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,964 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,968 [wrapper] pilotpid: 5876
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:13,972 [wrapper] Pilot exit status: 0
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,052 [wrapper] pandaids: 6838990872
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,078 [wrapper] cleanup supervisor_pilot 11009 5877
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,083 [wrapper] Test setup, not cleaning
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,087 [wrapper] apfmon messages muted
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,091 [wrapper] ==== wrapper stdout END ====
2025-10-12 18:37:15 (22416): Guest Log: 2025-10-12 16:37:14,095 [wrapper] ==== wrapper stderr END ====
2025-10-12 18:37:15 (22416): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 18:37:15 (22416): Guest Log:     "exeErrorCode": 0,
2025-10-12 18:37:15 (22416): Guest Log:     "exeErrorDiag": "",
2025-10-12 18:37:15 (22416): Guest Log:     "pilotErrorCode": 0,
2025-10-12 18:37:15 (22416): Guest Log:     "pilotErrorDiag": "",
2025-10-12 18:37:15 (22416): Guest Log:  *** Listing of results directory ***
2025-10-12 18:37:15 (22416): Guest Log: total 208432
2025-10-12 18:37:15 (22416): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 22:51 pilot3.tar.gz
2025-10-12 18:37:15 (22416): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 22:59 runpilot2-wrapper.sh
2025-10-12 18:37:15 (22416): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 22:59 queuedata.json
2025-10-12 18:37:15 (22416): Guest Log: -rwxr-xr-x. 1 atlas atlas      9274 Oct 12 01:39 init_data.xml
2025-10-12 18:37:15 (22416): Guest Log: -rwxr-xr-x. 1 atlas atlas    569677 Oct 12 01:39 input.tar.gz
2025-10-12 18:37:15 (22416): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 01:39 start_atlas.sh
2025-10-12 18:37:15 (22416): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 01:39 EVNT.46676267._002674.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 18:37:15 (22416): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 12 01:40 pandaJob.out
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas    975496 Oct 12 01:41 agis_schedconf.cvmfs.json
2025-10-12 18:37:15 (22416): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 01:41 pilot3
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas 193307990 Oct 12 16:35 HITS.46676269._066361.pool.root.1
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 16:36 pilot_heartbeat.json
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas      1037 Oct 12 16:36 memory_monitor_summary.json
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 16:36 agis_ddmendpoints.agis.ALL.json
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas    880708 Oct 12 16:36 log.46676269._066361.job.log.tgz.1
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas      7780 Oct 12 16:36 heartbeat.json
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 12 16:37 pilotlog.txt
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas   7264875 Oct 12 16:37 log.46676269._066361.job.log.1
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 16:37 output.list
2025-10-12 18:37:15 (22416): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 16:37 runtime_log
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas   8161280 Oct 12 16:37 result.tar.gz
2025-10-12 18:37:15 (22416): Guest Log: -rw-r--r--. 1 atlas atlas      8494 Oct 12 16:37 runtime_log.err
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas       653 Oct 12 16:37 1yuKDmHkxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKrhNDmxaO1Co.diag
2025-10-12 18:37:15 (22416): Guest Log: Looking for outputfile HITS.46676269._066361.pool.root.1
2025-10-12 18:37:15 (22416): Guest Log: HITS file was successfully produced
2025-10-12 18:37:15 (22416): Guest Log: -rw-------. 1 atlas atlas 193307990 Oct 12 16:35 /home/atlas/RunAtlas/HITS.46676269._066361.pool.root.1
2025-10-12 18:37:15 (22416): Guest Log: Successfully finished the ATLAS job!
2025-10-12 18:37:15 (22416): Guest Log: Copying the results back to the shared directory!
2025-10-12 18:37:16 (22416): Guest Log:  *** Contents of shared directory: ***
2025-10-12 18:37:16 (22416): Guest Log: total 413848
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root 221702546 Oct 12 01:38 ATLAS.root_0
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root 193307990 Oct 12 16:37 HITS.pool.root.1
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root      9274 Oct 12 01:38 init_data.xml
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 12 01:23 input.tar.gz
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root   8161280 Oct 12 16:37 result.tar.gz
2025-10-12 18:37:16 (22416): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 01:23 start_atlas.sh
2025-10-12 18:37:16 (22416): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 18:37:16 (22416): VM Completion File Detected.
2025-10-12 18:37:16 (22416): Powering off VM.
2025-10-12 18:37:17 (22416): Successfully stopped VM.
2025-10-12 18:37:17 (22416): Deregistering VM. (boinc_eb4e738ac50cc917, slot#2)
2025-10-12 18:37:17 (22416): Removing network bandwidth throttle group from VM.
2025-10-12 18:37:18 (22416): Removing VM from VirtualBox.
2025-10-12 18:37:23 (22416): called boinc_finish(0)

</stderr_txt>
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