Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:24:37 (2022447): wrapper (7.7.26015): starting
18:24:37 (2022447): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:24:37] Arguments: --nthreads 12
[2025-10-11 18:24:37] Threads: 12
[2025-10-11 18:24:37] Checking for CVMFS
[2025-10-11 18:24:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:24:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:24:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:24:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:24:38] 2.11.5.0 2588 30831 226584 151602 1 472 36196591 45568001 18916 130560 0 308550194 99.871 125055743 27633 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 18:24:38] CVMFS is ok
[2025-10-11 18:24:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:24:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:24:38] Further information can be found at the LHC@home message board.
[2025-10-11 18:24:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:24:38] Checking for apptainer binary...
[2025-10-11 18:24:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:24:38] Running /usr/bin/apptainer --version
[2025-10-11 18:24:38] apptainer version 1.4.1-1.el9
[2025-10-11 18:24:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:24:38] wns0080.triumf.lcg
[2025-10-11 18:24:38] apptainer works
[2025-10-11 18:24:38] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:24:38] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:24:38] Starting ATLAS job with PandaID=6838990942
[2025-10-11 18:24:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:29:10]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | WARNING  | wrong length of table data, x=[1760232346.0], y=[1952.0] (must be same and length>=4)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . Timing measurements:
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . get job = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . initial setup = 3 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload setup = 13 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-in = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload execution = 48 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-out = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . log creation = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:29:10] 2025-10-12 01:28:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990942/pilotlog.txt
[2025-10-11 18:29:10] 2025-10-12 01:28:36,724 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 18:29:10] - Log from pilotlog.txt -
[2025-10-11 18:29:10] 2025-10-12 01:28:36,690 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838990942/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | INFO     | extracted standard info from prmon json
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | WARNING  | wrong length of table data, x=[1760232346.0], y=[1952.0] (must be same and length>=4)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . Timing measurements:
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . get job = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . initial setup = 3 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload setup = 13 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-in = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload execution = 48 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-out = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . log creation = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:29:10] 2025-10-12 01:28:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990942/pilotlog.txt
[2025-10-11 18:29:10] 2025-10-12 01:28:36,724 | WARNING  | 
[2025-10-11 18:29:10] [begin log extracts]
[2025-10-11 18:29:10] - Log from pilotlog.txt -
[2025-10-11 18:29:10] 2025-10-12 01:28:36,690 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838990942/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | INFO     | extracted standard info from prmon json
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:29:10] 2025-10-12 01:28:36,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | WARNING  | wrong length of table data, x=[1760232346.0], y=[1952.0] (must be same and length>=4)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . Timing measurements:
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . get job = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . initial setup = 3 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload setup = 13 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-in = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . payload execution = 48 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . stage-out = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | . log creation = 0 s
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | ..............................
[2025-10-11 18:29:10] 2025-10-12 01:28:36,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:29:10] 2025-10-12 01:28:36,693 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990942/pilotlog.txt
[2025-10-11 18:29:10] [end log extracts]
[2025-10-11 18:29:10] 2025-10-12 01:28:36,724 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 18:29:10] 2025-10-12 01:28:36,725 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 18:29:10] 2025-10-12 01:28:36,800 | INFO     | time since job start (216s) is within the limit (172800.0s)
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | 
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | job summary report
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | --------------------------------------------------
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | PanDA job id: 6838990942
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | task id: 46676269
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 18:26:17,705 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | pilot state: failed 
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | transexitcode: 65
[2025-10-11 18:29:10] 2025-10-12 01:28:37,174 | INFO     | exeerrorcode: 65
[2025-10-11 18:29:10] 2025-10-12 01:28:37,175 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 18:29:10] 2025-10-12 01:28:37,175 | INFO     | exitcode: 65
[2025-10-11 18:29:10] 2025-10-12 01:28:37,175 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | cpuconsumptiontime: 20 s
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | nevents: 0
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | neventsw: 0
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | pid: 2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | pgrp: 2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | corecount: 12
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | event service: False
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | sizes: {0: 2348627, 1: 2348882, 11: 2349144, 12: 2349172, 65: 2372378, 66: 2376670, 67: 2376826, 196: 2376992}
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | --------------------------------------------------
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | 
[2025-10-11 18:29:10] 2025-10-12 01:28:37,178 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 18:29:10] 2025-10-12 01:28:37,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:29:10] 2025-10-12 01:28:37,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:29:10] 2025-10-12 01:28:37,239 | INFO     | job 6838990942 has completed (purged errors)
[2025-10-11 18:29:10] 2025-10-12 01:28:37,239 | INFO     | overall cleanup function is called
[2025-10-11 18:29:10] 2025-10-12 01:28:38,256 | INFO     | --- collectZombieJob: --- 10, [2032750]
[2025-10-11 18:29:10] 2025-10-12 01:28:38,257 | INFO     | zombie collector waiting for pid 2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:38,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:29:10] 2025-10-12 01:28:38,257 | INFO     | collected zombie processes
[2025-10-11 18:29:10] 2025-10-12 01:28:38,257 | INFO     | will attempt to kill all subprocesses of pid=2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:38,587 | INFO     | process IDs to be killed: [2032750] (in reverse order)
[2025-10-11 18:29:10] 2025-10-12 01:28:38,657 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:29:10] 2025-10-12 01:28:38,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:29:10] 2025-10-12 01:28:38,667 | INFO     | did not find any defunct processes belonging to 2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:38,676 | INFO     | did not find any defunct processes belonging to 2032750
[2025-10-11 18:29:10] 2025-10-12 01:28:38,676 | INFO     | ready for new job
[2025-10-11 18:29:10] 2025-10-12 01:28:38,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:29:10] 2025-10-12 01:28:38,677 | INFO     | ***************************************
[2025-10-11 18:29:10] 2025-10-12 01:28:38,677 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:29:10] 2025-10-12 01:28:38,677 | INFO     | ***************************************
[2025-10-11 18:29:10] 2025-10-12 01:28:38,678 | INFO     | 
[2025-10-11 18:29:10] 2025-10-12 01:28:38,679 | INFO     | architecture information:
[2025-10-11 18:29:10] 2025-10-12 01:28:38,680 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:29:10] 2025-10-12 01:28:38,693 | INFO     | cat /etc/os-release:
[2025-10-11 18:29:10] NAME="CentOS Linux"
[2025-10-11 18:29:10] VERSION="7 (Core)"
[2025-10-11 18:29:10] ID="centos"
[2025-10-11 18:29:10] ID_LIKE="rhel fedora"
[2025-10-11 18:29:10] VERSION_ID="7"
[2025-10-11 18:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:29:10] ANSI_COLOR="0;31"
[2025-10-11 18:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:29:10] HOME_URL="https://www.centos.org/"
[2025-10-11 18:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:29:10] 
[2025-10-11 18:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:29:10] 
[2025-10-11 18:29:10] 2025-10-12 01:28:38,693 | INFO     | ***************************************
[2025-10-11 18:29:10] 2025-10-12 01:28:39,197 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 18:29:10] 2025-10-12 01:28:39,210 | INFO     | sufficient remaining disk space (1894186483712 B)
[2025-10-11 18:29:10] 2025-10-12 01:28:39,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:29:10] 2025-10-12 01:28:39,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:29:10] 2025-10-12 01:28:39,211 | INFO     | update_server=False
[2025-10-11 18:29:10] 2025-10-12 01:28:39,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:29:10] 2025-10-12 01:28:39,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:29:10] 2025-10-12 01:28:39,211 | INFO     | aborting loop
[2025-10-11 18:29:10] 2025-10-12 01:28:40,113 | INFO     | all payload control threads have been joined
[2025-10-11 18:29:10] 2025-10-12 01:28:40,218 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:40,218 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:40,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:40,253 | INFO     | all data control threads have been joined
[2025-10-11 18:29:10] 2025-10-12 01:28:40,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:29:10] 2025-10-12 01:28:40,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:29:10] 2025-10-12 01:28:40,675 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:40,724 | INFO     | all job control threads have been joined
[2025-10-11 18:29:10] 2025-10-12 01:28:40,990 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,119 | INFO     | [payload] control thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,259 | INFO     | [data] control thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,262 | INFO     | [job] validate thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,269 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,473 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,575 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,730 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,730 | INFO     | [job] control thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:41,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:29:10] 2025-10-12 01:28:42,293 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:42,811 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:28:44,311 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:29:10] 2025-10-12 01:29:00,176 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:29:10] 2025-10-12 01:29:00,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675571189568)>', '<ExcThread(monitor, started 140675160971008)>']
[2025-10-11 18:29:10] 2025-10-12 01:29:05,602 | INFO     | all workflow threads have been joined
[2025-10-11 18:29:10] 2025-10-12 01:29:05,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:29:10] 2025-10-12 01:29:05,602 | INFO     | traces error code: 0
[2025-10-11 18:29:10] 2025-10-12 01:29:05,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:29:10] 2025-10-12 01:29:10,169 | INFO     | PID=2026130 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:29:10] 2025-10-12 01:29:10,170 | INFO     | .. there are 28 such processes running
[2025-10-11 18:29:10] 2025-10-12 01:29:10,170 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:29:10] 2025-10-12 01:29:10,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:29:10] 2025-10-12 01:29:10,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:29:10] 2025-10-12 01:29:10,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:29:10] 2025-10-12 01:29:10,171 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 18:29:10] 2025-10-12 01:29:10,171 | INFO     | [monitor] control thread has ended
[2025-10-11 18:29:10] 2025-10-12 01:29:10,314 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:29:10] 2025-10-12 01:29:10,329 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:29:10] 2025-10-12 01:29:10,331 [wrapper] pilotpid: 2026130
[2025-10-11 18:29:10] 2025-10-12 01:29:10,333 [wrapper] Pilot exit status: 0
[2025-10-11 18:29:10] 2025-10-12 01:29:10,375 [wrapper] pandaids: 6838990942
[2025-10-11 18:29:10] 2025-10-12 01:29:10,502 [wrapper] cleanup supervisor_pilot 2026136 2026131
[2025-10-11 18:29:10] 2025-10-12 01:29:10,507 [wrapper] Test setup, not cleaning
[2025-10-11 18:29:10] 2025-10-12 01:29:10,537 [wrapper] apfmon messages muted
[2025-10-11 18:29:10] 2025-10-12 01:29:10,543 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:29:10] 2025-10-12 01:29:10,548 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:29:10]  *** Error codes and diagnostics ***
[2025-10-11 18:29:10]     "exeErrorCode": 65,
[2025-10-11 18:29:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 18:29:10]     "pilotErrorCode": 1305,
[2025-10-11 18:29:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 18:29:10]  *** Listing of results directory ***
[2025-10-11 18:29:10] total 217864
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc    557409 Oct 11 15:51 pilot3.tar.gz
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc      5112 Oct 11 15:57 queuedata.json
[2025-10-11 18:29:10] -rwx------. 1 boinc boinc     36292 Oct 11 15:58 runpilot2-wrapper.sh
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc       100 Oct 11 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:29:10] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 18:24 run_atlas
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc       105 Oct 11 18:24 job.xml
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc      6593 Oct 11 18:24 init_data.xml
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc 218970941 Oct 11 18:24 EVNT.46676267._002676.pool.root.1
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:24 start_atlas.sh
[2025-10-11 18:29:10] drwxrwx--x. 2 boinc boinc      4096 Oct 11 18:24 shared
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc    569684 Oct 11 18:24 input.tar.gz
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc         0 Oct 11 18:24 boinc_lockfile
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc      2550 Oct 11 18:24 pandaJob.out
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc    975496 Oct 11 18:24 agis_schedconf.cvmfs.json
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc   1560580 Oct 11 18:24 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:29:10] drwx------. 5 boinc boinc      4096 Oct 11 18:25 pilot3
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc       522 Oct 11 18:26 boinc_task_state.xml
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc       972 Oct 11 18:26 memory_monitor_summary.json
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc     22003 Oct 11 18:26 log.46676269._066431.job.log.tgz.1
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc      8385 Oct 11 18:28 heartbeat.json
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc      8192 Oct 11 18:29 boinc_mmap_file
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc        22 Oct 11 18:29 wrapper_checkpoint.txt
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc        95 Oct 11 18:29 pilot_heartbeat.json
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc       893 Oct 11 18:29 pilotlog.txt
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc     89461 Oct 11 18:29 log.46676269._066431.job.log.1
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc       188 Oct 11 18:29 output.list
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc       620 Oct 11 18:29 runtime_log
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc    133120 Oct 11 18:29 result.tar.gz
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc      8528 Oct 11 18:29 runtime_log.err
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc       644 Oct 11 18:29 1ErKDmMjxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmujSMDm6umf2m.diag
[2025-10-11 18:29:10] -rw-r--r--. 1 boinc boinc     21801 Oct 11 18:29 stderr.txt
[2025-10-11 18:29:10] No HITS result produced
[2025-10-11 18:29:10]  *** Contents of shared directory: ***
[2025-10-11 18:29:10] total 214548
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc 218970941 Oct 11 18:24 ATLAS.root_0
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:24 start_atlas.sh
[2025-10-11 18:29:10] -rw-r--r--. 2 boinc boinc    569684 Oct 11 18:24 input.tar.gz
[2025-10-11 18:29:10] -rw-------. 1 boinc boinc    133120 Oct 11 18:29 result.tar.gz
18:29:12 (2022447): run_atlas exited; CPU time 25.842090
18:29:12 (2022447): called boinc_finish(0)

</stderr_txt>
]]>

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