Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:01:48 (2633081): wrapper (7.7.26015): starting
07:01:48 (2633081): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:01:48] Arguments: --nthreads 12
[2025-10-12 07:01:48] Threads: 12
[2025-10-12 07:01:48] Checking for CVMFS
[2025-10-12 07:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:01:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:01:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:01:49] 2.13.2.0 8715 28601 232288 151608 3 188 40130043 46080001 6410 130560 0 191698342 99.885 56016503 21594 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 07:01:49] CVMFS is ok
[2025-10-12 07:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:01:49] Further information can be found at the LHC@home message board.
[2025-10-12 07:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:01:49] Checking for apptainer binary...
[2025-10-12 07:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:01:49] Running /usr/bin/apptainer --version
[2025-10-12 07:01:49] apptainer version 1.4.2-1.el9
[2025-10-12 07:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:01:49] mff2104.farm.particle.cz
[2025-10-12 07:01:49] apptainer works
[2025-10-12 07:01:49] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:01:49] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:01:49] Starting ATLAS job with PandaID=6829845929
[2025-10-12 07:01:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:51:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:51:13]  scope=mc23_13p6TeV
[2025-10-12 07:51:13]  status=None
[2025-10-12 07:51:13]  status_code=0
[2025-10-12 07:51:13]  storage_token=
[2025-10-12 07:51:13]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6829845929/log.46376905._062455.job.log.tgz.1
[2025-10-12 07:51:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/f5/log.46376905._062455.job.log.tgz.1
[2025-10-12 07:51:13]  workdir=None
[2025-10-12 07:51:13] ]
[2025-10-12 07:51:13] 2025-10-12 05:50:32,913 | INFO     | transferring file log.46376905._062455.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6829845929/log.46376905._062455.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-12 07:51:13] 2025-10-12 05:50:32,914 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6829845929/log.46376905._062455.job.log.tgz.1 /scratch/.boinc/slots/1/log.46376905._062455.j
[2025-10-12 07:51:13] 2025-10-12 05:50:32,942 | INFO     | adding to output.list: log.46376905._062455.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/f5/log.46376905._062455.job.log.tg
[2025-10-12 07:51:13] 2025-10-12 05:50:32,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 07:51:13] 2025-10-12 05:50:32,944 | INFO     | summary of transferred files:
[2025-10-12 07:51:13] 2025-10-12 05:50:32,944 | INFO     |  -- lfn=log.46376905._062455.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 07:51:13] 2025-10-12 05:50:32,944 | INFO     | stage-out finished correctly
[2025-10-12 07:51:13] 2025-10-12 05:50:33,416 | INFO     | monitor loop #215: job 0:6829845929 is in state 'finished'
[2025-10-12 07:51:13] 2025-10-12 05:50:33,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:51:13] 2025-10-12 05:50:34,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 07:51:13] 2025-10-12 05:50:34,122 | INFO     | job 6829845929 has state=finished
[2025-10-12 07:51:13] 2025-10-12 05:50:34,122 | INFO     | preparing for final server update for job 6829845929 in state='finished'
[2025-10-12 07:51:13] 2025-10-12 05:50:34,123 | INFO     | this job has now completed (state=finished)
[2025-10-12 07:51:13] 2025-10-12 05:50:34,123 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 07:51:13] 2025-10-12 05:50:34,123 | INFO     | log transfer has been attempted: DONE
[2025-10-12 07:51:13] 2025-10-12 05:50:34,123 | INFO     | job 6829845929 has finished - writing final server update
[2025-10-12 07:51:13] 2025-10-12 05:50:34,123 | INFO     | total number of processed events: 400 (read)
[2025-10-12 07:51:13] 2025-10-12 05:50:34,124 | INFO     | executing command: lscpu
[2025-10-12 07:51:13] 2025-10-12 05:50:34,150 | INFO     | time since job start (2913s) is within the limit (172800.0s)
[2025-10-12 07:51:13] 2025-10-12 05:50:34,207 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 07:51:13] 2025-10-12 05:50:35,925 | INFO     | monitor loop #216: job 0:6829845929 is in state 'finished'
[2025-10-12 07:51:13] 2025-10-12 05:50:35,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:51:13] 2025-10-12 05:50:36,156 | INFO     | time since job start (2915s) is within the limit (172800.0s)
[2025-10-12 07:51:13] 2025-10-12 05:50:38,162 | INFO     | time since job start (2917s) is within the limit (172800.0s)
[2025-10-12 07:51:13] 2025-10-12 05:50:38,428 | INFO     | monitor loop #217: job 0:6829845929 is in state 'finished'
[2025-10-12 07:51:13] 2025-10-12 05:50:38,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,217 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 07:51:13] 2025-10-12 05:50:39,263 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2770.1361041666673
[2025-10-12 07:51:13] 2025-10-12 05:50:39,286 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6829845929/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,287 | INFO     | extracted standard info from prmon json
[2025-10-12 07:51:13] 2025-10-12 05:50:39,288 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:51:13] 2025-10-12 05:50:39,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:51:13] 2025-10-12 05:50:39,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:51:13] 2025-10-12 05:50:39,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:51:13] 2025-10-12 05:50:39,290 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:51:13] 2025-10-12 05:50:39,290 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,290 | INFO     | sum of deviations: 86657209.99999997
[2025-10-12 07:51:13] 2025-10-12 05:50:39,291 | INFO     | mean x: 1760246876.0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,291 | INFO     | mean y: 2672682.1707317075
[2025-10-12 07:51:13] 2025-10-12 05:50:39,291 | INFO     | -- intersect: -7139111502.767748
[2025-10-12 07:51:13] 2025-10-12 05:50:39,291 | INFO     | intersect: -7139111502.767748
[2025-10-12 07:51:13] 2025-10-12 05:50:39,291 | INFO     | chi2: 0.002124754821161118
[2025-10-12 07:51:13] 2025-10-12 05:50:39,292 | INFO     | -- intersect: -7139111502.767748
[2025-10-12 07:51:13] 2025-10-12 05:50:39,292 | INFO     | current memory leak: 4.06 B/s (using 41 data points, chi2=0.00)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,292 | INFO     | could have reported an average CPU frequency of 2760 MHz (5 samples)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,292 | INFO     | ..............................
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . Timing measurements:
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . get job = 0 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . initial setup = 1 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . payload setup = 7 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . stage-in = 0 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . payload execution = 2883 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . stage-out = 0 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | . log creation = 0 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,293 | INFO     | ..............................
[2025-10-12 07:51:13] 2025-10-12 05:50:39,390 | INFO     | 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,391 | INFO     | job summary report
[2025-10-12 07:51:13] 2025-10-12 05:50:39,391 | INFO     | --------------------------------------------------
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | PanDA job id: 6829845929
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | task id: 46376905
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | errors: (none)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | pilot state: finished 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | transexitcode: 0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | exeerrorcode: 0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,392 | INFO     | exeerrordiag: 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | exitcode: 0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | exitmsg: OK
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | cpuconsumptiontime: 29881 s
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | nevents: 400
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | neventsw: 0
[2025-10-12 07:51:13] 2025-10-12 05:50:39,393 | INFO     | pid: 2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | pgrp: 2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | corecount: 12
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | event service: False
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | sizes: {0: 2348817, 6: 2349079, 11: 2349107, 2894: 2374523, 2895: 2383523, 2896: 2383579, 2901: 2383933}
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | --------------------------------------------------
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,394 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-10-12 07:51:13] 2025-10-12 05:50:39,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:51:13] 2025-10-12 05:50:39,427 | INFO     | job 6829845929 has completed (purged errors)
[2025-10-12 07:51:13] 2025-10-12 05:50:39,428 | INFO     | overall cleanup function is called
[2025-10-12 07:51:13] 2025-10-12 05:50:39,754 | INFO     | PID=2637849 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 07:51:13] 2025-10-12 05:50:39,755 | INFO     | .. there are 8 such processes running
[2025-10-12 07:51:13] 2025-10-12 05:50:40,436 | INFO     | --- collectZombieJob: --- 10, [2644986]
[2025-10-12 07:51:13] 2025-10-12 05:50:40,436 | INFO     | zombie collector waiting for pid 2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:40,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:51:13] 2025-10-12 05:50:40,437 | INFO     | collected zombie processes
[2025-10-12 07:51:13] 2025-10-12 05:50:40,437 | INFO     | will attempt to kill all subprocesses of pid=2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:40,771 | INFO     | process IDs to be killed: [2644986] (in reverse order)
[2025-10-12 07:51:13] 2025-10-12 05:50:40,879 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:51:13] 2025-10-12 05:50:40,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:51:13] 2025-10-12 05:50:40,891 | INFO     | did not find any defunct processes belonging to 2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:40,902 | INFO     | did not find any defunct processes belonging to 2644986
[2025-10-12 07:51:13] 2025-10-12 05:50:40,902 | INFO     | ready for new job
[2025-10-12 07:51:13] 2025-10-12 05:50:40,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:51:13] 2025-10-12 05:50:40,904 | INFO     | ***************************************
[2025-10-12 07:51:13] 2025-10-12 05:50:40,904 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 07:51:13] 2025-10-12 05:50:40,904 | INFO     | ***************************************
[2025-10-12 07:51:13] 2025-10-12 05:50:40,904 | INFO     | 
[2025-10-12 07:51:13] 2025-10-12 05:50:40,910 | INFO     | architecture information:
[2025-10-12 07:51:13] 2025-10-12 05:50:40,910 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:51:13] 2025-10-12 05:50:40,929 | INFO     | cat /etc/os-release:
[2025-10-12 07:51:13] NAME="CentOS Linux"
[2025-10-12 07:51:13] VERSION="7 (Core)"
[2025-10-12 07:51:13] ID="centos"
[2025-10-12 07:51:13] ID_LIKE="rhel fedora"
[2025-10-12 07:51:13] VERSION_ID="7"
[2025-10-12 07:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:51:13] ANSI_COLOR="0;31"
[2025-10-12 07:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:51:13] HOME_URL="https://www.centos.org/"
[2025-10-12 07:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:51:13] 
[2025-10-12 07:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:51:13] 
[2025-10-12 07:51:13] 2025-10-12 05:50:40,930 | INFO     | ***************************************
[2025-10-12 07:51:13] 2025-10-12 05:50:41,433 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-10-12 07:51:13] 2025-10-12 05:50:41,522 | INFO     | sufficient remaining disk space (1681286758400 B)
[2025-10-12 07:51:13] 2025-10-12 05:50:41,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:51:13] 2025-10-12 05:50:41,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:51:13] 2025-10-12 05:50:41,523 | INFO     | update_server=False
[2025-10-12 07:51:13] 2025-10-12 05:50:41,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:51:13] 2025-10-12 05:50:41,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:51:13] 2025-10-12 05:50:41,600 | INFO     | all job control threads have been joined
[2025-10-12 07:51:13] 2025-10-12 05:50:41,649 | INFO     | all data control threads have been joined
[2025-10-12 07:51:13] 2025-10-12 05:50:41,699 | INFO     | all payload control threads have been joined
[2025-10-12 07:51:13] 2025-10-12 05:50:41,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:51:13] 2025-10-12 05:50:41,938 | INFO     | aborting loop
[2025-10-12 07:51:13] 2025-10-12 05:50:42,528 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,606 | INFO     | [job] control thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,655 | INFO     | [data] control thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,661 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,668 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,705 | INFO     | [payload] control thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,914 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:42,942 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:43,471 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:43,479 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:43,528 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:43,807 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:43,988 | INFO     | [job] validate thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:44,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:51:13] 2025-10-12 05:50:44,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:51:13] 2025-10-12 05:50:45,409 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:50:48,641 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:51:13] 2025-10-12 05:51:05,641 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:51:13] 2025-10-12 05:51:07,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591523747648)>', '<ExcThread(monitor, started 140591031633664)>']
[2025-10-12 07:51:13] 2025-10-12 05:51:12,218 | INFO     | PID=2637849 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:51:13] 2025-10-12 05:51:12,218 | INFO     | .. there are 8 such processes running
[2025-10-12 07:51:13] 2025-10-12 05:51:12,219 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:51:13] 2025-10-12 05:51:12,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:51:13] 2025-10-12 05:51:12,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:51:13] 2025-10-12 05:51:12,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:51:13] 2025-10-12 05:51:12,220 | INFO     | [monitor] control thread has ended
[2025-10-12 07:51:13] 2025-10-12 05:51:12,661 | INFO     | all workflow threads have been joined
[2025-10-12 07:51:13] 2025-10-12 05:51:12,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:51:13] 2025-10-12 05:51:12,663 | INFO     | traces error code: 0
[2025-10-12 07:51:13] 2025-10-12 05:51:12,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:51:13] 2025-10-12 05:51:12,847 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:51:13] 2025-10-12 05:51:12,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:51:13] 2025-10-12 05:51:12,853 [wrapper] pilotpid: 2637849
[2025-10-12 07:51:13] 2025-10-12 05:51:12,855 [wrapper] Pilot exit status: 0
[2025-10-12 07:51:13] 2025-10-12 05:51:12,868 [wrapper] pandaids: 6829845929
[2025-10-12 07:51:13] 2025-10-12 05:51:12,945 [wrapper] cleanup supervisor_pilot 2803207 2637850
[2025-10-12 07:51:13] 2025-10-12 05:51:12,948 [wrapper] Test setup, not cleaning
[2025-10-12 07:51:13] 2025-10-12 05:51:12,951 [wrapper] apfmon messages muted
[2025-10-12 07:51:13] 2025-10-12 05:51:12,953 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:51:13] 2025-10-12 05:51:12,956 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:51:13]  *** Error codes and diagnostics ***
[2025-10-12 07:51:13]     "exeErrorCode": 0,
[2025-10-12 07:51:13]     "exeErrorDiag": "",
[2025-10-12 07:51:13]     "pilotErrorCode": 0,
[2025-10-12 07:51:13]     "pilotErrorDiag": "",
[2025-10-12 07:51:13]  *** Listing of results directory ***
[2025-10-12 07:51:13] total 385800
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc    552446 Oct  4 17:36 pilot3.tar.gz
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc      5112 Oct  4 17:41 queuedata.json
[2025-10-12 07:51:13] -rwx------ 1 boinc boinc     36292 Oct  4 17:42 runpilot2-wrapper.sh
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:51:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:01 run_atlas
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:01 job.xml
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc      6665 Oct 12 07:01 init_data.xml
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc 213664327 Oct 12 07:01 EVNT.46376901._002255.pool.root.1
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:01 start_atlas.sh
[2025-10-12 07:51:13] drwxrwx--x 2 boinc boinc      4096 Oct 12 07:01 shared
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc    565602 Oct 12 07:01 input.tar.gz
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:01 boinc_lockfile
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc      2519 Oct 12 07:01 pandaJob.out
[2025-10-12 07:51:13] -rw------- 1 boinc boinc    975512 Oct 12 07:02 agis_schedconf.cvmfs.json
[2025-10-12 07:51:13] -rw------- 1 boinc boinc   1560580 Oct 12 07:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:51:13] drwx------ 4 boinc boinc      4096 Oct 12 07:02 pilot3
[2025-10-12 07:51:13] -rw------- 1 boinc boinc 175903589 Oct 12 07:50 HITS.46376905._062455.pool.root.1
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc       529 Oct 12 07:50 boinc_task_state.xml
[2025-10-12 07:51:13] -rw------- 1 boinc boinc      1021 Oct 12 07:50 memory_monitor_summary.json
[2025-10-12 07:51:13] -rw------- 1 boinc boinc    351042 Oct 12 07:50 log.46376905._062455.job.log.tgz.1
[2025-10-12 07:51:13] -rw------- 1 boinc boinc      7777 Oct 12 07:50 heartbeat.json
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc        27 Oct 12 07:51 wrapper_checkpoint.txt
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc      8192 Oct 12 07:51 boinc_mmap_file
[2025-10-12 07:51:13] -rw------- 1 boinc boinc        95 Oct 12 07:51 pilot_heartbeat.json
[2025-10-12 07:51:13] -rw------- 1 boinc boinc      4826 Oct 12 07:51 pilotlog.txt
[2025-10-12 07:51:13] -rw------- 1 boinc boinc    445165 Oct 12 07:51 log.46376905._062455.job.log.1
[2025-10-12 07:51:13] -rw------- 1 boinc boinc       357 Oct 12 07:51 output.list
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc       620 Oct 12 07:51 runtime_log
[2025-10-12 07:51:13] -rw------- 1 boinc boinc    819200 Oct 12 07:51 result.tar.gz
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc      8764 Oct 12 07:51 runtime_log.err
[2025-10-12 07:51:13] -rw------- 1 boinc boinc       663 Oct 12 07:51 6ixKDmhZJP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCrLNDmLt2zRn.diag
[2025-10-12 07:51:13] -rw-r--r-- 1 boinc boinc     22038 Oct 12 07:51 stderr.txt
[2025-10-12 07:51:13] HITS file was successfully produced:
[2025-10-12 07:51:13] -rw------- 1 boinc boinc 175903589 Oct 12 07:50 shared/HITS.pool.root.1
[2025-10-12 07:51:13]  *** Contents of shared directory: ***
[2025-10-12 07:51:13] total 381824
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc 213664327 Oct 12 07:01 ATLAS.root_0
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:01 start_atlas.sh
[2025-10-12 07:51:13] -rw-r--r-- 2 boinc boinc    565602 Oct 12 07:01 input.tar.gz
[2025-10-12 07:51:13] -rw------- 1 boinc boinc 175903589 Oct 12 07:50 HITS.pool.root.1
[2025-10-12 07:51:13] -rw------- 1 boinc boinc    819200 Oct 12 07:51 result.tar.gz
07:51:14 (2633081): run_atlas exited; CPU time 29929.572572
07:51:14 (2633081): called boinc_finish(0)

</stderr_txt>
]]>

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