Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:18 (2970407): wrapper (7.7.26015): starting
02:49:18 (2970407): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:49:18] Arguments: --nthreads 4
[2025-10-13 02:49:18] Threads: 4
[2025-10-13 02:49:18] Checking for CVMFS
[2025-10-13 02:49:18] No cvmfs_config command found, will try listing directly
[2025-10-13 02:49:18] CVMFS is ok
[2025-10-13 02:49:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:49:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:49:18] Further information can be found at the LHC@home message board.
[2025-10-13 02:49:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:49:18] Checking for apptainer binary...
[2025-10-13 02:49:18] which: no apptainer in ((null))
[2025-10-13 02:49:18] apptainer is not installed, using version from CVMFS
[2025-10-13 02:49:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:49:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-13 02:49:18] apptainer works
[2025-10-13 02:49:18] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:49:18] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:49:18] Starting ATLAS job with PandaID=6838851943
[2025-10-13 02:49:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:31:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:31:04] 2025-10-13 03:24:51,965 | INFO     | .. there are 9 such processes running
[2025-10-13 05:31:04] 2025-10-13 03:24:52,060 | INFO     | monitor loop #643: job 0:6838851943 is in state 'finished'
[2025-10-13 05:31:04] 2025-10-13 03:24:52,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,341 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:31:04] 2025-10-13 03:24:52,361 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2700.996710937499
[2025-10-13 05:31:04] 2025-10-13 03:24:52,386 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6838851943/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,386 | INFO     | extracted standard info from prmon json
[2025-10-13 05:31:04] 2025-10-13 03:24:52,386 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:31:04] 2025-10-13 03:24:52,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:31:04] 2025-10-13 03:24:52,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:31:04] 2025-10-13 03:24:52,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:31:04] 2025-10-13 03:24:52,390 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:31:04] 2025-10-13 03:24:52,390 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,391 | INFO     | sum of deviations: 15231145784.499996
[2025-10-13 05:31:04] 2025-10-13 03:24:52,391 | INFO     | mean x: 1760321213.5
[2025-10-13 05:31:04] 2025-10-13 03:24:52,391 | INFO     | mean y: 2323210.5592105263
[2025-10-13 05:31:04] 2025-10-13 03:24:52,391 | INFO     | -- intersect: -24620287997.030483
[2025-10-13 05:31:04] 2025-10-13 03:24:52,392 | INFO     | intersect: -24620287997.030483
[2025-10-13 05:31:04] 2025-10-13 03:24:52,392 | INFO     | chi2: 1.2926388030041496
[2025-10-13 05:31:04] 2025-10-13 03:24:52,392 | INFO     | sum of square deviations: 984941258.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,393 | INFO     | sum of deviations: 14709032724.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,393 | INFO     | mean x: 1760321061.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,393 | INFO     | mean y: 2322444.448979592
[2025-10-13 05:31:04] 2025-10-13 03:24:52,393 | INFO     | -- intersect: -26286169260.703453
[2025-10-13 05:31:04] 2025-10-13 03:24:52,393 | INFO     | intersect: -26286169260.703453
[2025-10-13 05:31:04] 2025-10-13 03:24:52,394 | INFO     | chi2: 1.2939561385101355
[2025-10-13 05:31:04] 2025-10-13 03:24:52,394 | INFO     | current chi2=1.2939561385101355 (change=-0.10191056487893982 %)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,394 | INFO     | right removable region: 146
[2025-10-13 05:31:04] 2025-10-13 03:24:52,394 | INFO     | sum of square deviations: 984941258.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,395 | INFO     | sum of deviations: -3364616161.9999995
[2025-10-13 05:31:04] 2025-10-13 03:24:52,395 | INFO     | mean x: 1760321366.0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,395 | INFO     | mean y: 2350009.1972789117
[2025-10-13 05:31:04] 2025-10-13 03:24:52,396 | INFO     | -- intersect: 6015709354.48883
[2025-10-13 05:31:04] 2025-10-13 03:24:52,396 | INFO     | intersect: 6015709354.48883
[2025-10-13 05:31:04] 2025-10-13 03:24:52,396 | INFO     | chi2: 0.011565682745003058
[2025-10-13 05:31:04] 2025-10-13 03:24:52,399 | INFO     | current chi2=0.011565682745003058 (change=99.10526570004522 %)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,399 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 05:31:04] 2025-10-13 03:24:52,400 | INFO     | sum of deviations: -2495813444.500001
[2025-10-13 05:31:04] 2025-10-13 03:24:52,400 | INFO     | mean x: 1760321518.5
[2025-10-13 05:31:04] 2025-10-13 03:24:52,400 | INFO     | mean y: 2348634.7816901407
[2025-10-13 05:31:04] 2025-10-13 03:24:52,400 | INFO     | -- intersect: 4950946908.279752
[2025-10-13 05:31:04] 2025-10-13 03:24:52,401 | INFO     | intersect: 4950946908.279752
[2025-10-13 05:31:04] 2025-10-13 03:24:52,401 | INFO     | chi2: 0.010781493407061232
[2025-10-13 05:31:04] 2025-10-13 03:24:52,401 | INFO     | current chi2=0.010781493407061232 (change=6.780311679227367 %)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,401 | INFO     | left removable region: 20
[2025-10-13 05:31:04] 2025-10-13 03:24:52,401 | INFO     | sum of square deviations: 620244187.5
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | sum of deviations: 57037928.000000276
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | mean x: 1760321640.5
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | mean y: 2344026.793650794
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | -- intersect: -159535924.70155182
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | intersect: -159535924.70155182
[2025-10-13 05:31:04] 2025-10-13 03:24:52,402 | INFO     | chi2: 0.0051521040014156395
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | -- intersect: -159535924.70155182
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | current memory leak: 0.09 B/s (using 126 data points, chi2=0.01)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | could have reported an average CPU frequency of 2710 MHz (9 samples)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | ..............................
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | . Timing measurements:
[2025-10-13 05:31:04] 2025-10-13 03:24:52,403 | INFO     | . get job = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . initial setup = 1 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . payload setup = 8 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . stage-in = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . payload execution = 9276 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . stage-out = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | . log creation = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,404 | INFO     | ..............................
[2025-10-13 05:31:04] 2025-10-13 03:24:52,497 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | job summary report
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | --------------------------------------------------
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | PanDA job id: 6838851943
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | task id: 46676269
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | errors: (none)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | pilot state: finished 
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | transexitcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | exeerrorcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | exeerrordiag: 
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | exitcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,498 | INFO     | exitmsg: OK
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | cpuconsumptiontime: 35407 s
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | nevents: 400
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | neventsw: 0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | pid: 2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | pgrp: 2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | corecount: 4
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | event service: False
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | sizes: {0: 2348642, 1: 2348897, 8: 2349159, 12: 2349187, 9289: 2377883, 9291: 2386905, 9294: 2387089, 9301: 2387347}
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | --------------------------------------------------
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:24:52,499 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-13 05:31:04] 2025-10-13 03:24:52,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:24:52,534 | INFO     | job 6838851943 has completed (purged errors)
[2025-10-13 05:31:04] 2025-10-13 03:24:52,534 | INFO     | overall cleanup function is called
[2025-10-13 05:31:04] 2025-10-13 03:24:53,543 | INFO     | --- collectZombieJob: --- 10, [2989575]
[2025-10-13 05:31:04] 2025-10-13 03:24:53,543 | INFO     | zombie collector waiting for pid 2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:53,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:31:04] 2025-10-13 03:24:53,544 | INFO     | collected zombie processes
[2025-10-13 05:31:04] 2025-10-13 03:24:53,544 | INFO     | will attempt to kill all subprocesses of pid=2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:54,181 | INFO     | process IDs to be killed: [2989575] (in reverse order)
[2025-10-13 05:31:04] 2025-10-13 03:24:54,410 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:31:04] 2025-10-13 03:24:54,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:31:04] 2025-10-13 03:24:54,439 | INFO     | did not find any defunct processes belonging to 2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:54,466 | INFO     | did not find any defunct processes belonging to 2989575
[2025-10-13 05:31:04] 2025-10-13 03:24:54,467 | INFO     | ready for new job
[2025-10-13 05:31:04] 2025-10-13 03:24:54,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:31:04] 2025-10-13 03:24:54,469 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:24:54,469 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:31:04] 2025-10-13 03:24:54,470 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:24:54,470 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:24:54,478 | INFO     | architecture information:
[2025-10-13 05:31:04] 2025-10-13 03:24:54,478 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:31:04] 2025-10-13 03:24:54,505 | INFO     | cat /etc/os-release:
[2025-10-13 05:31:04] NAME="CentOS Linux"
[2025-10-13 05:31:04] VERSION="7 (Core)"
[2025-10-13 05:31:04] ID="centos"
[2025-10-13 05:31:04] ID_LIKE="rhel fedora"
[2025-10-13 05:31:04] VERSION_ID="7"
[2025-10-13 05:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:31:04] ANSI_COLOR="0;31"
[2025-10-13 05:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:31:04] HOME_URL="https://www.centos.org/"
[2025-10-13 05:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:31:04] 
[2025-10-13 05:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:31:04] 
[2025-10-13 05:31:04] 2025-10-13 03:24:54,506 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:24:55,009 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-13 05:31:04] 2025-10-13 03:24:55,036 | INFO     | sufficient remaining disk space (3335702708224 B)
[2025-10-13 05:31:04] 2025-10-13 03:24:55,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:31:04] 2025-10-13 03:24:55,037 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:31:04] 2025-10-13 03:24:55,037 | INFO     | update_server=False
[2025-10-13 05:31:04] 2025-10-13 03:24:55,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:31:04] 2025-10-13 03:24:55,396 | INFO     | all payload control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:24:55,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:24:55,568 | INFO     | aborting loop
[2025-10-13 05:31:04] 2025-10-13 03:24:55,603 | INFO     | all data control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:24:56,042 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,080 | INFO     | [job] validate thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:24:56,168 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,379 | INFO     | all job control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:24:56,401 | INFO     | [payload] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,545 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,573 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,608 | INFO     | [data] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:56,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:24:57,064 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:57,364 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:57,385 | INFO     | [job] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:57,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:57,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:24:57,508 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:58,102 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:24:58,513 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:00,627 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:24,975 | INFO     | PID=2974785 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:31:04] 2025-10-13 03:25:24,976 | INFO     | .. there are 9 such processes running
[2025-10-13 05:31:04] 2025-10-13 03:25:24,977 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:31:04] 2025-10-13 03:25:24,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:31:04] 2025-10-13 03:25:24,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:31:04] 2025-10-13 03:25:47,694 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:31:04] 2025-10-13 03:25:48,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22604353460032)>', '<ExcThread(monitor, started 22604112946944)>']
[2025-10-13 05:31:04] 2025-10-13 03:25:49,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:31:04] 2025-10-13 03:25:49,103 | INFO     | [monitor] control thread has ended
[2025-10-13 05:31:04] 2025-10-13 03:25:53,292 | INFO     | all workflow threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:25:53,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:31:04] 2025-10-13 03:25:53,292 | INFO     | traces error code: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:53,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:31:04] 2025-10-13 03:25:53,448 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:31:04] 2025-10-13 03:25:53,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:31:04] 2025-10-13 03:25:53,456 [wrapper] pilotpid: 2974785
[2025-10-13 05:31:04] 2025-10-13 03:25:53,460 [wrapper] Pilot exit status: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:53,478 [wrapper] pandaids: 6838851943
[2025-10-13 05:31:04] 2025-10-13 03:25:53,641 [wrapper] cleanup supervisor_pilot 3349378 2974786
[2025-10-13 05:31:04] 2025-10-13 03:25:53,645 [wrapper] Test setup, not cleaning
[2025-10-13 05:31:04] 2025-10-13 03:25:53,652 [wrapper] apfmon messages muted
[2025-10-13 05:31:04] 2025-10-13 03:25:53,655 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:31:04] 2025-10-13 03:25:53,658 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:31:04]  *** Error codes and diagnostics ***
[2025-10-13 05:31:04]     "exeErrorCode": 0,
[2025-10-13 05:31:04]     "exeErrorDiag": "",
[2025-10-13 05:31:04]     "pilotErrorCode": 0,
[2025-10-13 05:31:04]     "pilotErrorDiag": "",
[2025-10-13 05:31:04]  *** Listing of results directory ***
[2025-10-13 05:31:04] total 416220
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 21:43 pilot3.tar.gz
[2025-10-13 05:31:04] -rwx------ 1 boinc boinc     36292 Oct 11 21:58 runpilot2-wrapper.sh
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 21:58 queuedata.json
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:31:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:49 run_atlas
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:49 job.xml
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      6688 Oct 13 02:49 init_data.xml
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc 218845635 Oct 13 02:49 EVNT.46676267._002574.pool.root.1
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:49 start_atlas.sh
[2025-10-13 05:31:04] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:49 shared
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc    569672 Oct 13 02:49 input.tar.gz
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:49 boinc_lockfile
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:49 pandaJob.out
[2025-10-13 05:31:04] -rw------- 1 boinc boinc    975603 Oct 13 02:49 agis_schedconf.cvmfs.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1560580 Oct 13 02:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:31:04] drwx------ 5 boinc boinc      4096 Oct 13 02:49 pilot3
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 200177230 Oct 13 05:24 HITS.46676269._064038.pool.root.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      1024 Oct 13 05:24 memory_monitor_summary.json
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       528 Oct 13 05:24 boinc_task_state.xml
[2025-10-13 05:31:04] -rw------- 1 boinc boinc    325480 Oct 13 05:24 log.46676269._064038.job.log.tgz.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      7779 Oct 13 05:24 heartbeat.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc        95 Oct 13 05:25 pilot_heartbeat.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      4835 Oct 13 05:25 pilotlog.txt
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1314710 Oct 13 05:25 log.46676269._064038.job.log.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc       357 Oct 13 05:25 output.list
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:25 runtime_log
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1658880 Oct 13 05:25 result.tar.gz
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      9084 Oct 13 05:25 runtime_log.err
[2025-10-13 05:31:04] -rw------- 1 boinc boinc       662 Oct 13 05:25 JPXNDm9uuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPUhNDmN9pn1n.diag
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc        26 Oct 13 05:30 wrapper_checkpoint.txt
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:31 boinc_mmap_file
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc     20917 Oct 13 05:31 stderr.txt
[2025-10-13 05:31:04] HITS file was successfully produced:
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 200177230 Oct 13 05:24 shared/HITS.pool.root.1
[2025-10-13 05:31:04]  *** Contents of shared directory: ***
[2025-10-13 05:31:04] total 411412
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc 218845635 Oct 13 02:49 ATLAS.root_0
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:49 start_atlas.sh
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc    569672 Oct 13 02:49 input.tar.gz
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 200177230 Oct 13 05:24 HITS.pool.root.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1658880 Oct 13 05:25 result.tar.gz
05:31:05 (2970407): run_atlas exited; CPU time 36031.083688
05:31:05 (2970407): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN