Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:19:56 (2874226): wrapper (7.7.26015): starting
21:19:56 (2874226): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:19:56] Arguments: --nthreads 8
[2025-10-11 21:19:56] Threads: 8
[2025-10-11 21:19:56] Checking for CVMFS
[2025-10-11 21:19:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:19:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:20:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:20:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:20:18] 2.13.2.0 3608313 128576 229348 151602 3 342 20230782 32935936 31178 16776704 0 181301113 99.616 196500735 29374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:20:18] CVMFS is ok
[2025-10-11 21:20:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:20:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:20:18] Further information can be found at the LHC@home message board.
[2025-10-11 21:20:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:20:18] Checking for apptainer binary...
[2025-10-11 21:20:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:20:18] Running /usr/bin/apptainer --version
[2025-10-11 21:20:18] apptainer version 1.4.3-1.el9
[2025-10-11 21:20:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:20:19] c6-6-39-3.aglt2.org
[2025-10-11 21:20:19] apptainer works
[2025-10-11 21:20:19] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:20:19] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:20:19] Starting ATLAS job with PandaID=6838851780
[2025-10-11 21:20:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:17:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:17:58] 2025-10-12 11:12:33,447 | INFO     | sum of square deviations: 60190447432.23124
[2025-10-12 07:17:58] 2025-10-12 11:12:33,457 | INFO     | sum of deviations: -139506338481.387
[2025-10-12 07:17:58] 2025-10-12 11:12:33,457 | INFO     | mean x: 1760249828.0552678
[2025-10-12 07:17:58] 2025-10-12 11:12:33,458 | INFO     | mean y: 2063199.01208981
[2025-10-12 07:17:58] 2025-10-12 11:12:33,458 | INFO     | -- intersect: 4081880160.0168333
[2025-10-12 07:17:58] 2025-10-12 11:12:33,458 | INFO     | intersect: 4081880160.0168333
[2025-10-12 07:17:58] 2025-10-12 11:12:33,459 | INFO     | chi2: 7.047554492993293
[2025-10-12 07:17:58] 2025-10-12 11:12:33,460 | INFO     | sum of square deviations: 58644701603.36599
[2025-10-12 07:17:58] 2025-10-12 11:12:33,469 | INFO     | sum of deviations: 12129975306.073233
[2025-10-12 07:17:58] 2025-10-12 11:12:33,469 | INFO     | mean x: 1760249675.5609756
[2025-10-12 07:17:58] 2025-10-12 11:12:33,469 | INFO     | mean y: 2078161.155052265
[2025-10-12 07:17:58] 2025-10-12 11:12:33,470 | INFO     | -- intersect: -362009037.0625705
[2025-10-12 07:17:58] 2025-10-12 11:12:33,470 | INFO     | intersect: -362009037.0625705
[2025-10-12 07:17:58] 2025-10-12 11:12:33,471 | INFO     | chi2: 3.530042607891987
[2025-10-12 07:17:58] 2025-10-12 11:12:33,471 | INFO     | current chi2=3.530042607891987 (change=49.911098787507505 %)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,472 | INFO     | sum of square deviations: 57125584039.72223
[2025-10-12 07:17:58] 2025-10-12 11:12:33,481 | INFO     | sum of deviations: 55071019044.24781
[2025-10-12 07:17:58] 2025-10-12 11:12:33,481 | INFO     | mean x: 1760249523.063269
[2025-10-12 07:17:58] 2025-10-12 11:12:33,481 | INFO     | mean y: 2082466.576449912
[2025-10-12 07:17:58] 2025-10-12 11:12:33,481 | INFO     | -- intersect: -1694858346.1396027
[2025-10-12 07:17:58] 2025-10-12 11:12:33,482 | INFO     | intersect: -1694858346.1396027
[2025-10-12 07:17:58] 2025-10-12 11:12:33,482 | INFO     | chi2: 3.2306250402760366
[2025-10-12 07:17:58] 2025-10-12 11:12:33,483 | INFO     | current chi2=3.2306250402760366 (change=8.481981689018523 %)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,483 | INFO     | right removable region: 568
[2025-10-12 07:17:58] 2025-10-12 11:12:33,484 | INFO     | sum of square deviations: 58644399529.115005
[2025-10-12 07:17:58] 2025-10-12 11:12:33,493 | INFO     | sum of deviations: -251605277491.6759
[2025-10-12 07:17:58] 2025-10-12 11:12:33,493 | INFO     | mean x: 1760249980.56446
[2025-10-12 07:17:58] 2025-10-12 11:12:33,493 | INFO     | mean y: 2074235.5452961673
[2025-10-12 07:17:58] 2025-10-12 11:12:33,493 | INFO     | -- intersect: 7554171083.169402
[2025-10-12 07:17:58] 2025-10-12 11:12:33,493 | INFO     | intersect: 7554171083.169402
[2025-10-12 07:17:58] 2025-10-12 11:12:33,494 | INFO     | chi2: 4.802807375582048
[2025-10-12 07:17:58] 2025-10-12 11:12:33,495 | INFO     | current chi2=4.802807375582048 (change=31.851433282892412 %)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,496 | INFO     | sum of square deviations: 57125084938.04578
[2025-10-12 07:17:58] 2025-10-12 11:12:33,505 | INFO     | sum of deviations: -293739882823.24426
[2025-10-12 07:17:58] 2025-10-12 11:12:33,505 | INFO     | mean x: 1760250133.0720563
[2025-10-12 07:17:58] 2025-10-12 11:12:33,505 | INFO     | mean y: 2078459.88400703
[2025-10-12 07:17:58] 2025-10-12 11:12:33,505 | INFO     | -- intersect: 9053367720.791916
[2025-10-12 07:17:58] 2025-10-12 11:12:33,505 | INFO     | intersect: 9053367720.791916
[2025-10-12 07:17:58] 2025-10-12 11:12:33,506 | INFO     | chi2: 4.468761603935434
[2025-10-12 07:17:58] 2025-10-12 11:12:33,507 | INFO     | current chi2=4.468761603935434 (change=6.9552190109671255 %)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,507 | INFO     | left removable region: 20
[2025-10-12 07:17:58] 2025-10-12 11:12:33,508 | INFO     | sum of square deviations: 51030930730.43826
[2025-10-12 07:17:58] 2025-10-12 11:12:33,516 | INFO     | sum of deviations: -98720349604.25546
[2025-10-12 07:17:58] 2025-10-12 11:12:33,516 | INFO     | mean x: 1760250102.591241
[2025-10-12 07:17:58] 2025-10-12 11:12:33,517 | INFO     | mean y: 2099792.155109489
[2025-10-12 07:17:58] 2025-10-12 11:12:33,517 | INFO     | -- intersect: 3407338595.982849
[2025-10-12 07:17:58] 2025-10-12 11:12:33,517 | INFO     | intersect: 3407338595.982849
[2025-10-12 07:17:58] 2025-10-12 11:12:33,518 | INFO     | chi2: 0.526384289515633
[2025-10-12 07:17:58] 2025-10-12 11:12:33,518 | INFO     | -- intersect: 3407338595.982849
[2025-10-12 07:17:58] 2025-10-12 11:12:33,518 | INFO     | current memory leak: -1.93 B/s (using 548 data points, chi2=0.53)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | could have reported an average CPU frequency of 3005 MHz (23 samples)
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | ..............................
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | . Timing measurements:
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | . get job = 0 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | . initial setup = 5 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | . payload setup = 30 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,520 | INFO     | . stage-in = 0 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,521 | INFO     | . payload execution = 35316 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,521 | INFO     | . stage-out = 7 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,521 | INFO     | . log creation = 1 s
[2025-10-12 07:17:58] 2025-10-12 11:12:33,521 | INFO     | ..............................
[2025-10-12 07:17:58] 2025-10-12 11:12:34,692 | INFO     | 
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | job summary report
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | --------------------------------------------------
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | PanDA job id: 6838851780
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | task id: 46676269
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | errors: (none)
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | pilot state: finished 
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | transexitcode: 0
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | exeerrorcode: 0
[2025-10-12 07:17:58] 2025-10-12 11:12:34,693 | INFO     | exeerrordiag: 
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | exitcode: 0
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | exitmsg: OK
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | cpuconsumptiontime: 40804 s
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | nevents: 400
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | neventsw: 0
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | pid: 2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | pgrp: 2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | corecount: 8
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | event service: False
[2025-10-12 07:17:58] 2025-10-12 11:12:34,694 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 29: 2349259, 35: 2349415, 35352: 2389383, 35353: 2389382, 35362: 2398436, 35363: 2398492, 354
[2025-10-12 07:17:58] 2025-10-12 11:12:34,695 | INFO     | --------------------------------------------------
[2025-10-12 07:17:58] 2025-10-12 11:12:34,695 | INFO     | 
[2025-10-12 07:17:58] 2025-10-12 11:12:34,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:17:58] 2025-10-12 11:12:35,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:17:58] 2025-10-12 11:12:35,003 | INFO     | job 6838851780 has completed (purged errors)
[2025-10-12 07:17:58] 2025-10-12 11:12:35,003 | INFO     | overall cleanup function is called
[2025-10-12 07:17:58] 2025-10-12 11:12:36,080 | INFO     | --- collectZombieJob: --- 10, [2908256]
[2025-10-12 07:17:58] 2025-10-12 11:12:36,080 | INFO     | zombie collector waiting for pid 2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:36,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:17:58] 2025-10-12 11:12:36,080 | INFO     | collected zombie processes
[2025-10-12 07:17:58] 2025-10-12 11:12:36,080 | INFO     | will attempt to kill all subprocesses of pid=2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:38,954 | INFO     | PID=2889403 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:17:58] 2025-10-12 11:12:38,954 | INFO     | .. there are 48 such processes running
[2025-10-12 07:17:58] 2025-10-12 11:12:39,010 | INFO     | process IDs to be killed: [2908256] (in reverse order)
[2025-10-12 07:17:58] 2025-10-12 11:12:39,311 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:17:58] 2025-10-12 11:12:39,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:17:58] 2025-10-12 11:12:39,441 | INFO     | did not find any defunct processes belonging to 2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:39,503 | INFO     | did not find any defunct processes belonging to 2908256
[2025-10-12 07:17:58] 2025-10-12 11:12:39,504 | INFO     | ready for new job
[2025-10-12 07:17:58] 2025-10-12 11:12:39,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:17:58] 2025-10-12 11:12:39,508 | INFO     | ***************************************
[2025-10-12 07:17:58] 2025-10-12 11:12:39,508 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:17:58] 2025-10-12 11:12:39,508 | INFO     | ***************************************
[2025-10-12 07:17:58] 2025-10-12 11:12:39,508 | INFO     | 
[2025-10-12 07:17:58] 2025-10-12 11:12:39,544 | INFO     | architecture information:
[2025-10-12 07:17:58] 2025-10-12 11:12:39,545 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:17:58] 2025-10-12 11:12:39,561 | INFO     | cat /etc/os-release:
[2025-10-12 07:17:58] NAME="CentOS Linux"
[2025-10-12 07:17:58] VERSION="7 (Core)"
[2025-10-12 07:17:58] ID="centos"
[2025-10-12 07:17:58] ID_LIKE="rhel fedora"
[2025-10-12 07:17:58] VERSION_ID="7"
[2025-10-12 07:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:17:58] ANSI_COLOR="0;31"
[2025-10-12 07:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:17:58] HOME_URL="https://www.centos.org/"
[2025-10-12 07:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:17:58] 
[2025-10-12 07:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:17:58] 
[2025-10-12 07:17:58] 2025-10-12 11:12:39,562 | INFO     | ***************************************
[2025-10-12 07:17:58] 2025-10-12 11:12:40,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 07:17:58] 2025-10-12 11:12:40,132 | INFO     | sufficient remaining disk space (73083650048 B)
[2025-10-12 07:17:58] 2025-10-12 11:12:40,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:17:58] 2025-10-12 11:12:40,133 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:17:58] 2025-10-12 11:12:40,133 | INFO     | update_server=False
[2025-10-12 07:17:58] 2025-10-12 11:12:40,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:17:58] 2025-10-12 11:12:40,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:17:58] 2025-10-12 11:12:40,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:17:58] 2025-10-12 11:12:40,248 | INFO     | all data control threads have been joined
[2025-10-12 07:17:58] 2025-10-12 11:12:40,273 | INFO     | all payload control threads have been joined
[2025-10-12 07:17:58] 2025-10-12 11:12:40,274 | INFO     | all job control threads have been joined
[2025-10-12 07:17:58] 2025-10-12 11:12:40,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:17:58] 2025-10-12 11:12:40,525 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:17:58] 2025-10-12 11:12:40,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:17:58] 2025-10-12 11:12:40,525 | INFO     | will abort loop
[2025-10-12 07:17:58] 2025-10-12 11:12:41,143 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,143 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,254 | INFO     | [data] control thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,280 | INFO     | [payload] control thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,287 | INFO     | [job] control thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,297 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,530 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,677 | INFO     | [job] validate thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,916 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,943 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:41,997 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:42,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:42,036 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:42,148 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:42,223 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:12:42,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:17:58] 2025-10-12 11:12:46,561 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:17:58] 2025-10-12 11:13:16,174 | INFO     | PID=2889403 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:17:58] 2025-10-12 11:13:16,174 | INFO     | .. there are 48 such processes running
[2025-10-12 07:17:58] 2025-10-12 11:13:16,174 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:17:58] 2025-10-12 11:13:16,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:17:58] 2025-10-12 11:13:16,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:17:58] 2025-10-12 11:13:26,053 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:17:58] 2025-10-12 11:13:26,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595726247744)>', '<ExcThread(monitor, started 140595376924416)>']
[2025-10-12 07:17:58] 2025-10-12 11:13:26,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:17:58] 2025-10-12 11:13:26,294 | INFO     | [monitor] control thread has ended
[2025-10-12 07:17:58] 2025-10-12 11:13:31,176 | INFO     | all workflow threads have been joined
[2025-10-12 07:17:58] 2025-10-12 11:13:31,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:17:58] 2025-10-12 11:13:31,177 | INFO     | traces error code: 0
[2025-10-12 07:17:58] 2025-10-12 11:13:31,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:17:58] 2025-10-12 11:13:33,708 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:17:58] 2025-10-12 11:13:33,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:17:58] 2025-10-12 11:13:33,786 [wrapper] pilotpid: 2889403
[2025-10-12 07:17:58] 2025-10-12 11:13:33,817 [wrapper] Pilot exit status: 0
[2025-10-12 07:17:58] 2025-10-12 11:13:34,051 [wrapper] pandaids: 6838851780
[2025-10-12 07:17:58] 2025-10-12 11:13:35,102 [wrapper] cleanup supervisor_pilot  993127 2889404
[2025-10-12 07:17:58] 2025-10-12 11:13:35,144 [wrapper] Test setup, not cleaning
[2025-10-12 07:17:58] 2025-10-12 11:13:35,184 [wrapper] apfmon messages muted
[2025-10-12 07:17:58] 2025-10-12 11:13:35,221 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:17:58] 2025-10-12 11:13:35,272 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:17:58]  *** Error codes and diagnostics ***
[2025-10-12 07:17:58]     "exeErrorCode": 0,
[2025-10-12 07:17:58]     "exeErrorDiag": "",
[2025-10-12 07:17:58]     "pilotErrorCode": 0,
[2025-10-12 07:17:58]     "pilotErrorDiag": "",
[2025-10-12 07:17:58]  *** Listing of results directory ***
[2025-10-12 07:17:58] total 417296
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:53 queuedata.json
[2025-10-12 07:17:58] -rwx------. 1 boincer umatlas     36292 Oct 11 15:53 runpilot2-wrapper.sh
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:17:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:19 run_atlas
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:19 job.xml
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas 219432183 Oct 11 21:19 EVNT.46676267._002570.pool.root.1
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:19 start_atlas.sh
[2025-10-12 07:17:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:19 shared
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 21:19 input.tar.gz
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:19 boinc_lockfile
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 21:20 pandaJob.out
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas    975496 Oct 11 21:21 agis_schedconf.cvmfs.json
[2025-10-12 07:17:58] drwx------. 5 boincer umatlas      4096 Oct 11 21:21 pilot3
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 07:01 init_data.xml
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas 193953711 Oct 12 07:06 HITS.46676269._063953.pool.root.1
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:06 boinc_task_state.xml
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas      1044 Oct 12 07:11 memory_monitor_summary.json
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas    733470 Oct 12 07:11 log.46676269._063953.job.log.tgz.1
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas        95 Oct 12 07:12 pilot_heartbeat.json
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas      7824 Oct 12 07:12 heartbeat.json
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas      5010 Oct 12 07:13 pilotlog.txt
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas   4273658 Oct 12 07:13 log.46676269._063953.job.log.1
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas       357 Oct 12 07:13 output.list
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:13 runtime_log
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas   5027840 Oct 12 07:13 result.tar.gz
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 07:13 runtime_log.err
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas       659 Oct 12 07:13 DkwNDmjpuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmThNDmy4Dijn.diag
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:17 wrapper_checkpoint.txt
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:17 boinc_mmap_file
[2025-10-12 07:17:58] -rw-r--r--. 1 boincer umatlas     21182 Oct 12 07:17 stderr.txt
[2025-10-12 07:17:58] HITS file was successfully produced:
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas 193953711 Oct 12 07:06 shared/HITS.pool.root.1
[2025-10-12 07:17:58]  *** Contents of shared directory: ***
[2025-10-12 07:17:58] total 409196
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas 219432183 Oct 11 21:19 ATLAS.root_0
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:19 start_atlas.sh
[2025-10-12 07:17:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 21:19 input.tar.gz
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas 193953711 Oct 12 07:06 HITS.pool.root.1
[2025-10-12 07:17:58] -rw-------. 1 boincer umatlas   5027840 Oct 12 07:13 result.tar.gz
07:18:00 (2874226): run_atlas exited; CPU time 42157.677526
07:18:00 (2874226): called boinc_finish(0)

</stderr_txt>
]]>

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