Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:13:28 (27540): wrapper (7.7.26015): starting
21:13:28 (27540): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:13:28] Arguments: --nthreads 8
[2025-10-11 21:13:28] Threads: 8
[2025-10-11 21:13:28] Checking for CVMFS
[2025-10-11 21:13:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:13:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:13:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:13:29] 2.11.2.0 2854 215255 118148 151601 1 59 12503556 20275200 1 130560 2 75974117 99.974 12847087 11194 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:13:29] CVMFS is ok
[2025-10-11 21:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:13:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:13:29] Further information can be found at the LHC@home message board.
[2025-10-11 21:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:13:29] Checking for apptainer binary...
[2025-10-11 21:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:13:29] Running /usr/bin/apptainer --version
[2025-10-11 21:13:29] apptainer version 1.3.2-1.el7
[2025-10-11 21:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:13:31] c-204-32.aglt2.org
[2025-10-11 21:13:31] apptainer works
[2025-10-11 21:13:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:13:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:13:31] Starting ATLAS job with PandaID=6838634784
[2025-10-11 21:13:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:25:08]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:25:08] 2025-10-12 03:24:07,197 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:25:08] 2025-10-12 03:24:07,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:25:08] 2025-10-12 03:24:07,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:25:08] 2025-10-12 03:24:07,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:25:08] 2025-10-12 03:24:07,201 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:25:08] 2025-10-12 03:24:07,201 | INFO     | sum of square deviations: 650252192.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,202 | INFO     | sum of deviations: -6584726862.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,202 | INFO     | mean x: 1760235534.5
[2025-10-11 23:25:08] 2025-10-12 03:24:07,202 | INFO     | mean y: 2520315.015625
[2025-10-11 23:25:08] 2025-10-12 03:24:07,202 | INFO     | -- intersect: 17827404798.40246
[2025-10-11 23:25:08] 2025-10-12 03:24:07,203 | INFO     | intersect: 17827404798.40246
[2025-10-11 23:25:08] 2025-10-12 03:24:07,203 | INFO     | chi2: 2.36486720466215
[2025-10-11 23:25:08] 2025-10-12 03:24:07,203 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,204 | INFO     | sum of deviations: 2643573165.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,204 | INFO     | mean x: 1760235382.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,204 | INFO     | mean y: 2538969.4065040653
[2025-10-11 23:25:08] 2025-10-12 03:24:07,204 | INFO     | -- intersect: -8062324689.795097
[2025-10-11 23:25:08] 2025-10-12 03:24:07,204 | INFO     | intersect: -8062324689.795097
[2025-10-11 23:25:08] 2025-10-12 03:24:07,205 | INFO     | chi2: 1.5966148413792538
[2025-10-11 23:25:08] 2025-10-12 03:24:07,205 | INFO     | current chi2=1.5966148413792538 (change=32.48606779139002 %)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,205 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | sum of deviations: 3153721502.499993
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | mean x: 1760235229.5
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | mean y: 2540121.8898305083
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | -- intersect: -10894305382.917814
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | intersect: -10894305382.917814
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | chi2: 1.5990843218549067
[2025-10-11 23:25:08] 2025-10-12 03:24:07,206 | INFO     | current chi2=1.5990843218549067 (change=-0.1546697682904905 %)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,207 | INFO     | right removable region: 117
[2025-10-11 23:25:08] 2025-10-12 03:24:07,207 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,207 | INFO     | sum of deviations: -26615221771.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | mean x: 1760235687.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | mean y: 2561313.6829268294
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | -- intersect: 81198790295.33893
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | intersect: 81198790295.33893
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | chi2: 0.8758795242293188
[2025-10-11 23:25:08] 2025-10-12 03:24:07,208 | INFO     | current chi2=0.8758795242293188 (change=62.9628453342923 %)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,209 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 23:25:08] 2025-10-12 03:24:07,209 | INFO     | sum of deviations: -26356912787.499996
[2025-10-11 23:25:08] 2025-10-12 03:24:07,209 | INFO     | mean x: 1760235839.5
[2025-10-11 23:25:08] 2025-10-12 03:24:07,209 | INFO     | mean y: 2560637.533898305
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | -- intersect: 91071891246.3109
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | intersect: 91071891246.3109
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | chi2: 0.8558502944871516
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | current chi2=0.8558502944871516 (change=2.2867562476461423 %)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | left removable region: 20
[2025-10-11 23:25:08] 2025-10-12 03:24:07,210 | INFO     | sum of square deviations: 282974608.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,211 | INFO     | sum of deviations: -12426049529.999998
[2025-10-11 23:25:08] 2025-10-12 03:24:07,211 | INFO     | mean x: 1760235809.0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,211 | INFO     | mean y: 2576502.8865979384
[2025-10-11 23:25:08] 2025-10-12 03:24:07,211 | INFO     | -- intersect: 77298477720.68639
[2025-10-11 23:25:08] 2025-10-12 03:24:07,211 | INFO     | intersect: 77298477720.68639
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | chi2: 0.04547247155192364
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | -- intersect: 77298477720.68639
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | current memory leak: -43.91 B/s (using 97 data points, chi2=0.05)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | could have reported an average CPU frequency of 1981 MHz (8 samples)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | ..............................
[2025-10-11 23:25:08] 2025-10-12 03:24:07,212 | INFO     | . Timing measurements:
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . get job = 0 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . initial setup = 2 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . payload setup = 8 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . stage-in = 0 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . payload execution = 7775 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . stage-out = 1 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | . log creation = 0 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,213 | INFO     | ..............................
[2025-10-11 23:25:08] 2025-10-12 03:24:07,303 | INFO     | 
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | job summary report
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | --------------------------------------------------
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | PanDA job id: 6838634784
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | task id: 46676269
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | errors: (none)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | pilot state: finished 
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | transexitcode: 0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | exeerrorcode: 0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | exeerrordiag: 
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | exitcode: 0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,305 | INFO     | exitmsg: OK
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | cpuconsumptiontime: 57428 s
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | nevents: 400
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | neventsw: 0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | pid: 5409
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | pgrp: 5409
[2025-10-11 23:25:08] 2025-10-12 03:24:07,306 | INFO     | corecount: 8
[2025-10-11 23:25:08] 2025-10-12 03:24:07,307 | INFO     | event service: False
[2025-10-11 23:25:08] 2025-10-12 03:24:07,307 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7787: 2376781, 7788: 2376780, 7789: 2385834, 7792: 2386018, 7800: 2386212}
[2025-10-11 23:25:08] 2025-10-12 03:24:07,307 | INFO     | --------------------------------------------------
[2025-10-11 23:25:08] 2025-10-12 03:24:07,307 | INFO     | 
[2025-10-11 23:25:08] 2025-10-12 03:24:07,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:25:08] 2025-10-12 03:24:07,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,340 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:25:08] 2025-10-12 03:24:07,340 | INFO     | job 6838634784 has completed (purged errors)
[2025-10-11 23:25:08] 2025-10-12 03:24:07,340 | INFO     | overall cleanup function is called
[2025-10-11 23:25:08] 2025-10-12 03:24:08,349 | INFO     | --- collectZombieJob: --- 10, [5409]
[2025-10-11 23:25:08] 2025-10-12 03:24:08,349 | INFO     | zombie collector waiting for pid 5409
[2025-10-11 23:25:08] 2025-10-12 03:24:08,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:25:08] 2025-10-12 03:24:08,349 | INFO     | collected zombie processes
[2025-10-11 23:25:08] 2025-10-12 03:24:08,350 | INFO     | will attempt to kill all subprocesses of pid=5409
[2025-10-11 23:25:08] 2025-10-12 03:24:08,438 | INFO     | process IDs to be killed: [5409] (in reverse order)
[2025-10-11 23:25:08] 2025-10-12 03:24:08,496 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:25:08] 2025-10-12 03:24:08,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:25:08] 2025-10-12 03:24:08,501 | INFO     | did not find any defunct processes belonging to 5409
[2025-10-11 23:25:08] 2025-10-12 03:24:08,505 | INFO     | did not find any defunct processes belonging to 5409
[2025-10-11 23:25:08] 2025-10-12 03:24:08,505 | INFO     | ready for new job
[2025-10-11 23:25:08] 2025-10-12 03:24:08,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:25:08] 2025-10-12 03:24:08,507 | INFO     | ***************************************
[2025-10-11 23:25:08] 2025-10-12 03:24:08,507 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:25:08] 2025-10-12 03:24:08,508 | INFO     | ***************************************
[2025-10-11 23:25:08] 2025-10-12 03:24:08,508 | INFO     | 
[2025-10-11 23:25:08] 2025-10-12 03:24:08,508 | INFO     | architecture information:
[2025-10-11 23:25:08] 2025-10-12 03:24:08,509 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:25:08] 2025-10-12 03:24:08,526 | INFO     | cat /etc/os-release:
[2025-10-11 23:25:08] NAME="CentOS Linux"
[2025-10-11 23:25:08] VERSION="7 (Core)"
[2025-10-11 23:25:08] ID="centos"
[2025-10-11 23:25:08] ID_LIKE="rhel fedora"
[2025-10-11 23:25:08] VERSION_ID="7"
[2025-10-11 23:25:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:25:08] ANSI_COLOR="0;31"
[2025-10-11 23:25:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:25:08] HOME_URL="https://www.centos.org/"
[2025-10-11 23:25:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:25:08] 
[2025-10-11 23:25:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:25:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:25:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:25:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:25:08] 
[2025-10-11 23:25:08] 2025-10-12 03:24:08,526 | INFO     | ***************************************
[2025-10-11 23:25:08] 2025-10-12 03:24:09,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:25:08] 2025-10-12 03:24:09,047 | INFO     | sufficient remaining disk space (18557698048 B)
[2025-10-11 23:25:08] 2025-10-12 03:24:09,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:25:08] 2025-10-12 03:24:09,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:25:08] 2025-10-12 03:24:09,048 | INFO     | update_server=False
[2025-10-11 23:25:08] 2025-10-12 03:24:09,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:25:08] 2025-10-12 03:24:09,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:25:08] 2025-10-12 03:24:09,049 | INFO     | aborting loop
[2025-10-11 23:25:08] 2025-10-12 03:24:09,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:25:08] 2025-10-12 03:24:09,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:25:08] 2025-10-12 03:24:09,065 | INFO     | all data control threads have been joined
[2025-10-11 23:25:08] 2025-10-12 03:24:09,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:25:08] 2025-10-12 03:24:09,407 | INFO     | all payload control threads have been joined
[2025-10-11 23:25:08] 2025-10-12 03:24:10,053 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,054 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,055 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,071 | INFO     | [data] control thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,408 | INFO     | [payload] control thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,505 | INFO     | all job control threads have been joined
[2025-10-11 23:25:08] 2025-10-12 03:24:10,758 | INFO     | [job] validate thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,849 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:10,874 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,056 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,397 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,398 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,511 | INFO     | [job] control thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,536 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:11,540 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:13,389 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:25:08] 2025-10-12 03:24:39,559 | INFO     | PID=31211 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:25:08] 2025-10-12 03:24:39,559 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:25:08] 2025-10-12 03:24:39,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:25:08] 2025-10-12 03:24:39,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:25:08] 2025-10-12 03:25:01,244 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:25:08] 2025-10-12 03:25:03,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450023311168)>', '<ExcThread(monitor, started 140448844736256)>']
[2025-10-11 23:25:08] 2025-10-12 03:25:03,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:25:08] 2025-10-12 03:25:03,684 | INFO     | [monitor] control thread has ended
[2025-10-11 23:25:08] 2025-10-12 03:25:08,056 | INFO     | all workflow threads have been joined
[2025-10-11 23:25:08] 2025-10-12 03:25:08,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:25:08] 2025-10-12 03:25:08,057 | INFO     | traces error code: 0
[2025-10-11 23:25:08] 2025-10-12 03:25:08,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:25:08] 2025-10-12 03:25:08,159 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:25:08] 2025-10-12 03:25:08,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:25:08] 2025-10-12 03:25:08,168 [wrapper] pilotpid: 31211
[2025-10-11 23:25:08] 2025-10-12 03:25:08,173 [wrapper] Pilot exit status: 0
[2025-10-11 23:25:08] 2025-10-12 03:25:08,193 [wrapper] pandaids: 6838634784
[2025-10-11 23:25:08] 2025-10-12 03:25:08,251 [wrapper] cleanup supervisor_pilot 24884 31212
[2025-10-11 23:25:08] 2025-10-12 03:25:08,256 [wrapper] Test setup, not cleaning
[2025-10-11 23:25:08] 2025-10-12 03:25:08,261 [wrapper] apfmon messages muted
[2025-10-11 23:25:08] 2025-10-12 03:25:08,266 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:25:08] 2025-10-12 03:25:08,271 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:25:08]  *** Error codes and diagnostics ***
[2025-10-11 23:25:08]     "exeErrorCode": 0,
[2025-10-11 23:25:08]     "exeErrorDiag": "",
[2025-10-11 23:25:08]     "pilotErrorCode": 0,
[2025-10-11 23:25:08]     "pilotErrorDiag": "",
[2025-10-11 23:25:08]  *** Listing of results directory ***
[2025-10-11 23:25:08] total 410108
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:33 pilot3.tar.gz
[2025-10-11 23:25:08] -rwx------ 1 boincer umatlas     36292 Oct 11 13:36 runpilot2-wrapper.sh
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:36 queuedata.json
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas       100 Oct 11 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:25:08] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 21:13 run_atlas
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas       105 Oct 11 21:13 job.xml
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas 219707237 Oct 11 21:13 EVNT.46676267._002494.pool.root.1
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:13 start_atlas.sh
[2025-10-11 23:25:08] drwxrwx--x 2 boincer umatlas      4096 Oct 11 21:13 shared
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 21:13 input.tar.gz
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas         0 Oct 11 21:13 boinc_lockfile
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 21:13 pandaJob.out
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas    975496 Oct 11 21:13 agis_schedconf.cvmfs.json
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas   1560580 Oct 11 21:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:25:08] drwx------ 5 boincer umatlas      4096 Oct 11 21:13 pilot3
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 23:19 init_data.xml
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas 193412330 Oct 11 23:23 HITS.46676269._062079.pool.root.1
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:23 boinc_task_state.xml
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas        95 Oct 11 23:23 pilot_heartbeat.json
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas      1051 Oct 11 23:23 memory_monitor_summary.json
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas    365455 Oct 11 23:23 log.46676269._062079.job.log.tgz.1
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas      7854 Oct 11 23:24 heartbeat.json
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:24 boinc_mmap_file
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:25 wrapper_checkpoint.txt
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas      4746 Oct 11 23:25 pilotlog.txt
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas   1096203 Oct 11 23:25 log.46676269._062079.job.log.1
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas       357 Oct 11 23:25 output.list
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:25 runtime_log
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas   1484800 Oct 11 23:25 result.tar.gz
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:25 runtime_log.err
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas       660 Oct 11 23:25 icWKDm5gsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm47gNDmyMjXTm.diag
[2025-10-11 23:25:08] -rw-r--r-- 1 boincer umatlas     20854 Oct 11 23:25 stderr.txt
[2025-10-11 23:25:08] HITS file was successfully produced:
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas 193412330 Oct 11 23:23 shared/HITS.pool.root.1
[2025-10-11 23:25:08]  *** Contents of shared directory: ***
[2025-10-11 23:25:08] total 405472
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas 219707237 Oct 11 21:13 ATLAS.root_0
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:13 start_atlas.sh
[2025-10-11 23:25:08] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 21:13 input.tar.gz
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas 193412330 Oct 11 23:23 HITS.pool.root.1
[2025-10-11 23:25:08] -rw------- 1 boincer umatlas   1484800 Oct 11 23:25 result.tar.gz
23:25:09 (27540): run_atlas exited; CPU time 57368.301175
23:25:09 (27540): called boinc_finish(0)

</stderr_txt>
]]>

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