Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:11:10 (890094): wrapper (7.7.26015): starting
21:11:10 (890094): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:11:10] Arguments: --nthreads 8
[2025-10-11 21:11:10] Threads: 8
[2025-10-11 21:11:10] Checking for CVMFS
[2025-10-11 21:11:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:11:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:11:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:11:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:11:13] 2.13.2.0 6302 43583 262128 151601 0 368 27405973 32935937 28166 16776704 0 129844631 99.640 119041968 30333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:11:13] CVMFS is ok
[2025-10-11 21:11:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:11:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:11:13] Further information can be found at the LHC@home message board.
[2025-10-11 21:11:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:11:13] Checking for apptainer binary...
[2025-10-11 21:11:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:11:13] Running /usr/bin/apptainer --version
[2025-10-11 21:11:13] apptainer version 1.4.3-1.el9
[2025-10-11 21:11:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:11:14] c6-1-24-4.aglt2.org
[2025-10-11 21:11:14] apptainer works
[2025-10-11 21:11:15] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:11:15] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:11:15] Starting ATLAS job with PandaID=6838852059
[2025-10-11 21:11:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:04:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:04:07] 2025-10-12 11:03:14,372 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838852059/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,373 | INFO     | extracted standard info from prmon json
[2025-10-12 07:04:07] 2025-10-12 11:03:14,373 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:04:07] 2025-10-12 11:03:14,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:04:07] 2025-10-12 11:03:14,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:04:07] 2025-10-12 11:03:14,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:04:07] 2025-10-12 11:03:14,436 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:04:07] 2025-10-12 11:03:14,445 | INFO     | monitor loop #1816: job 0:6838852059 is in state 'finished'
[2025-10-12 07:04:07] 2025-10-12 11:03:14,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,446 | INFO     | sum of square deviations: 59565085686.91541
[2025-10-12 07:04:07] 2025-10-12 11:03:14,459 | INFO     | sum of deviations: -124181229561.05377
[2025-10-12 07:04:07] 2025-10-12 11:03:14,459 | INFO     | mean x: 1760249325.9878683
[2025-10-12 07:04:07] 2025-10-12 11:03:14,459 | INFO     | mean y: 2084886.1351819758
[2025-10-12 07:04:07] 2025-10-12 11:03:14,459 | INFO     | -- intersect: 3671850875.965815
[2025-10-12 07:04:07] 2025-10-12 11:03:14,459 | INFO     | intersect: 3671850875.965815
[2025-10-12 07:04:07] 2025-10-12 11:03:14,468 | INFO     | chi2: 4.986846133385201
[2025-10-12 07:04:07] 2025-10-12 11:03:14,469 | INFO     | sum of square deviations: 58030105166.9931
[2025-10-12 07:04:07] 2025-10-12 11:03:14,492 | INFO     | sum of deviations: -83506752263.09799
[2025-10-12 07:04:07] 2025-10-12 11:03:14,492 | INFO     | mean x: 1760249173.4965036
[2025-10-12 07:04:07] 2025-10-12 11:03:14,492 | INFO     | mean y: 2088904.4510489511
[2025-10-12 07:04:07] 2025-10-12 11:03:14,492 | INFO     | -- intersect: 2535130869.9876437
[2025-10-12 07:04:07] 2025-10-12 11:03:14,492 | INFO     | intersect: 2535130869.9876437
[2025-10-12 07:04:07] 2025-10-12 11:03:14,493 | INFO     | chi2: 4.2899755845363226
[2025-10-12 07:04:07] 2025-10-12 11:03:14,493 | INFO     | current chi2=4.2899755845363226 (change=13.974173860780922 %)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,493 | INFO     | right removable region: 571
[2025-10-12 07:04:07] 2025-10-12 11:03:14,494 | INFO     | sum of square deviations: 58029792542.98434
[2025-10-12 07:04:07] 2025-10-12 11:03:14,569 | INFO     | sum of deviations: -250619986494.27286
[2025-10-12 07:04:07] 2025-10-12 11:03:14,569 | INFO     | mean x: 1760249478.4947553
[2025-10-12 07:04:07] 2025-10-12 11:03:14,570 | INFO     | mean y: 2097429.909090909
[2025-10-12 07:04:07] 2025-10-12 11:03:14,570 | INFO     | -- intersect: 7604290737.7712755
[2025-10-12 07:04:07] 2025-10-12 11:03:14,570 | INFO     | intersect: 7604290737.7712755
[2025-10-12 07:04:07] 2025-10-12 11:03:14,570 | INFO     | chi2: 2.293796435692748
[2025-10-12 07:04:07] 2025-10-12 11:03:14,571 | INFO     | current chi2=2.293796435692748 (change=54.00306377338217 %)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,571 | INFO     | sum of square deviations: 56521139930.0
[2025-10-12 07:04:07] 2025-10-12 11:03:14,627 | INFO     | time since job start (35423s) is within the limit (172800.0s)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,667 | INFO     | sum of deviations: -297405825519.0001
[2025-10-12 07:04:07] 2025-10-12 11:03:14,667 | INFO     | mean x: 1760249631.0
[2025-10-12 07:04:07] 2025-10-12 11:03:14,667 | INFO     | mean y: 2102153.234567901
[2025-10-12 07:04:07] 2025-10-12 11:03:14,667 | INFO     | -- intersect: 9264273710.20285
[2025-10-12 07:04:07] 2025-10-12 11:03:14,667 | INFO     | intersect: 9264273710.20285
[2025-10-12 07:04:07] 2025-10-12 11:03:14,691 | INFO     | chi2: 1.8493050341821171
[2025-10-12 07:04:07] 2025-10-12 11:03:14,691 | INFO     | current chi2=1.8493050341821171 (change=19.377979431570193 %)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,691 | INFO     | left removable region: 20
[2025-10-12 07:04:07] 2025-10-12 11:03:14,692 | INFO     | sum of square deviations: 51869926885.818565
[2025-10-12 07:04:07] 2025-10-12 11:03:14,711 | INFO     | sum of deviations: -265817546303.2611
[2025-10-12 07:04:07] 2025-10-12 11:03:14,711 | INFO     | mean x: 1760249753.018149
[2025-10-12 07:04:07] 2025-10-12 11:03:14,711 | INFO     | mean y: 2107479.626134301
[2025-10-12 07:04:07] 2025-10-12 11:03:14,711 | INFO     | -- intersect: 9022850293.823792
[2025-10-12 07:04:07] 2025-10-12 11:03:14,711 | INFO     | intersect: 9022850293.823792
[2025-10-12 07:04:07] 2025-10-12 11:03:14,712 | INFO     | chi2: 1.0227898489358325
[2025-10-12 07:04:07] 2025-10-12 11:03:14,712 | INFO     | -- intersect: 9022850293.823792
[2025-10-12 07:04:07] 2025-10-12 11:03:14,712 | INFO     | current memory leak: -5.12 B/s (using 551 data points, chi2=1.02)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | could have reported an average CPU frequency of 2772 MHz (23 samples)
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | ..............................
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . Timing measurements:
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . get job = 0 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . initial setup = 9 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . payload setup = 56 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . stage-in = 0 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . payload execution = 35227 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . stage-out = 5 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | . log creation = 1 s
[2025-10-12 07:04:07] 2025-10-12 11:03:14,713 | INFO     | ..............................
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | 
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | job summary report
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | --------------------------------------------------
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | PanDA job id: 6838852059
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | task id: 46676269
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | errors: (none)
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | pilot state: finished 
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | transexitcode: 0
[2025-10-12 07:04:07] 2025-10-12 11:03:15,110 | INFO     | exeerrorcode: 0
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | exeerrordiag: 
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | exitcode: 0
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | exitmsg: OK
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | cpuconsumptiontime: 44544 s
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | nevents: 400
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | neventsw: 0
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | pid: 905203
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | pgrp: 905203
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | corecount: 8
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | event service: False
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348713, 3: 2348912, 4: 2348940, 15: 2348968, 26: 2349124, 38: 2349152, 48: 2349442, 50: 2349470, 35287: 2389129, 35288: 2389408
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | --------------------------------------------------
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | 
[2025-10-12 07:04:07] 2025-10-12 11:03:15,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 07:04:07] 2025-10-12 11:03:15,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:04:07] 2025-10-12 11:03:15,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:04:07] 2025-10-12 11:03:15,522 | INFO     | job 6838852059 has completed (purged errors)
[2025-10-12 07:04:07] 2025-10-12 11:03:15,522 | INFO     | overall cleanup function is called
[2025-10-12 07:04:07] 2025-10-12 11:03:16,551 | INFO     | --- collectZombieJob: --- 10, [905203]
[2025-10-12 07:04:07] 2025-10-12 11:03:16,552 | INFO     | zombie collector waiting for pid 905203
[2025-10-12 07:04:07] 2025-10-12 11:03:16,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:04:07] 2025-10-12 11:03:16,552 | INFO     | collected zombie processes
[2025-10-12 07:04:07] 2025-10-12 11:03:16,552 | INFO     | will attempt to kill all subprocesses of pid=905203
[2025-10-12 07:04:07] 2025-10-12 11:03:19,502 | INFO     | process IDs to be killed: [905203] (in reverse order)
[2025-10-12 07:04:07] 2025-10-12 11:03:20,756 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:04:07] 2025-10-12 11:03:20,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:04:07] 2025-10-12 11:03:20,896 | INFO     | did not find any defunct processes belonging to 905203
[2025-10-12 07:04:07] 2025-10-12 11:03:21,031 | INFO     | did not find any defunct processes belonging to 905203
[2025-10-12 07:04:07] 2025-10-12 11:03:21,031 | INFO     | ready for new job
[2025-10-12 07:04:07] 2025-10-12 11:03:21,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:04:07] 2025-10-12 11:03:21,057 | INFO     | ***************************************
[2025-10-12 07:04:07] 2025-10-12 11:03:21,058 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:04:07] 2025-10-12 11:03:21,058 | INFO     | ***************************************
[2025-10-12 07:04:07] 2025-10-12 11:03:21,058 | INFO     | 
[2025-10-12 07:04:07] 2025-10-12 11:03:21,077 | INFO     | architecture information:
[2025-10-12 07:04:07] 2025-10-12 11:03:21,114 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:04:07] 2025-10-12 11:03:21,321 | INFO     | cat /etc/os-release:
[2025-10-12 07:04:07] NAME="CentOS Linux"
[2025-10-12 07:04:07] VERSION="7 (Core)"
[2025-10-12 07:04:07] ID="centos"
[2025-10-12 07:04:07] ID_LIKE="rhel fedora"
[2025-10-12 07:04:07] VERSION_ID="7"
[2025-10-12 07:04:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:04:07] ANSI_COLOR="0;31"
[2025-10-12 07:04:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:04:07] HOME_URL="https://www.centos.org/"
[2025-10-12 07:04:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:04:07] 
[2025-10-12 07:04:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:04:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:04:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:04:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:04:07] 
[2025-10-12 07:04:07] 2025-10-12 11:03:21,321 | INFO     | ***************************************
[2025-10-12 07:04:07] 2025-10-12 11:03:21,825 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 07:04:07] 2025-10-12 11:03:21,954 | INFO     | sufficient remaining disk space (75113693184 B)
[2025-10-12 07:04:07] 2025-10-12 11:03:21,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:04:07] 2025-10-12 11:03:21,955 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:04:07] 2025-10-12 11:03:21,955 | INFO     | update_server=False
[2025-10-12 07:04:07] 2025-10-12 11:03:21,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:04:07] 2025-10-12 11:03:21,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:04:07] 2025-10-12 11:03:21,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:04:07] 2025-10-12 11:03:22,034 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:04:07] 2025-10-12 11:03:22,035 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:04:07] 2025-10-12 11:03:22,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:04:07] 2025-10-12 11:03:22,035 | INFO     | will abort loop
[2025-10-12 07:04:07] 2025-10-12 11:03:22,293 | INFO     | all job control threads have been joined
[2025-10-12 07:04:07] 2025-10-12 11:03:22,482 | INFO     | all data control threads have been joined
[2025-10-12 07:04:07] 2025-10-12 11:03:22,980 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,041 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,135 | INFO     | all payload control threads have been joined
[2025-10-12 07:04:07] 2025-10-12 11:03:23,377 | INFO     | [job] control thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,388 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,503 | INFO     | [data] control thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,639 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,779 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,909 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,921 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:23,986 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:24,142 | INFO     | [payload] control thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:24,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:04:07] 2025-10-12 11:03:24,411 | INFO     | [job] validate thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:24,465 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:25,215 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:25,988 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:04:07] 2025-10-12 11:03:50,087 | INFO     | PID=895419 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 07:04:07] 2025-10-12 11:03:50,088 | INFO     | .. there are 31 such processes running
[2025-10-12 07:04:07] 2025-10-12 11:03:50,088 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:04:07] 2025-10-12 11:03:50,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:04:07] 2025-10-12 11:03:50,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:04:07] 2025-10-12 11:03:59,327 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:04:07] 2025-10-12 11:04:00,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703855908672)>', '<ExcThread(monitor, started 140702918895360)>']
[2025-10-12 07:04:07] 2025-10-12 11:04:01,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:04:07] 2025-10-12 11:04:01,155 | INFO     | [monitor] control thread has ended
[2025-10-12 07:04:07] 2025-10-12 11:04:05,457 | INFO     | all workflow threads have been joined
[2025-10-12 07:04:07] 2025-10-12 11:04:05,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:04:07] 2025-10-12 11:04:05,458 | INFO     | traces error code: 0
[2025-10-12 07:04:07] 2025-10-12 11:04:05,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:04:07] 2025-10-12 11:04:06,141 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:04:07] 2025-10-12 11:04:06,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:04:07] 2025-10-12 11:04:06,158 [wrapper] pilotpid: 895419
[2025-10-12 07:04:07] 2025-10-12 11:04:06,161 [wrapper] Pilot exit status: 0
[2025-10-12 07:04:07] 2025-10-12 11:04:06,210 [wrapper] pandaids: 6838852059
[2025-10-12 07:04:07] 2025-10-12 11:04:06,347 [wrapper] cleanup supervisor_pilot 2799869 895420
[2025-10-12 07:04:07] 2025-10-12 11:04:06,351 [wrapper] Test setup, not cleaning
[2025-10-12 07:04:07] 2025-10-12 11:04:06,375 [wrapper] apfmon messages muted
[2025-10-12 07:04:07] 2025-10-12 11:04:06,380 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:04:07] 2025-10-12 11:04:06,383 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:04:07]  *** Error codes and diagnostics ***
[2025-10-12 07:04:07]     "exeErrorCode": 0,
[2025-10-12 07:04:07]     "exeErrorDiag": "",
[2025-10-12 07:04:07]     "pilotErrorCode": 0,
[2025-10-12 07:04:07]     "pilotErrorDiag": "",
[2025-10-12 07:04:07]  *** Listing of results directory ***
[2025-10-12 07:04:07] total 415692
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:59 pilot3.tar.gz
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:03 queuedata.json
[2025-10-12 07:04:07] -rwx------. 1 boincer umatlas     36292 Oct 11 16:04 runpilot2-wrapper.sh
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:04:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:11 run_atlas
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:11 job.xml
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas 221513219 Oct 11 21:11 EVNT.46676267._002578.pool.root.1
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:11 start_atlas.sh
[2025-10-12 07:04:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:11 shared
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:11 input.tar.gz
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:11 boinc_lockfile
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:11 pandaJob.out
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas    975496 Oct 11 21:12 agis_schedconf.cvmfs.json
[2025-10-12 07:04:07] drwx------. 5 boincer umatlas      4096 Oct 11 21:12 pilot3
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 07:00 init_data.xml
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas 190912964 Oct 12 07:00 HITS.46676269._064154.pool.root.1
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:00 boinc_task_state.xml
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas      1044 Oct 12 07:02 memory_monitor_summary.json
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas    708115 Oct 12 07:02 log.46676269._064154.job.log.tgz.1
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas        95 Oct 12 07:02 pilot_heartbeat.json
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas      7831 Oct 12 07:03 heartbeat.json
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas      5009 Oct 12 07:04 pilotlog.txt
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:04 boinc_mmap_file
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:04 wrapper_checkpoint.txt
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas   3961142 Oct 12 07:04 log.46676269._064154.job.log.1
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas       357 Oct 12 07:04 output.list
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:04 runtime_log
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas   4689920 Oct 12 07:04 result.tar.gz
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 07:04 runtime_log.err
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas       659 Oct 12 07:04 eh4KDms0uR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEVhNDmy9iion.diag
[2025-10-12 07:04:07] -rw-r--r--. 1 boincer umatlas     21220 Oct 12 07:04 stderr.txt
[2025-10-12 07:04:07] HITS file was successfully produced:
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas 190912964 Oct 12 07:00 shared/HITS.pool.root.1
[2025-10-12 07:04:07]  *** Contents of shared directory: ***
[2025-10-12 07:04:07] total 407924
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas 221513219 Oct 11 21:11 ATLAS.root_0
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:11 start_atlas.sh
[2025-10-12 07:04:07] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:11 input.tar.gz
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas 190912964 Oct 12 07:00 HITS.pool.root.1
[2025-10-12 07:04:07] -rw-------. 1 boincer umatlas   4689920 Oct 12 07:04 result.tar.gz
07:04:08 (890094): run_atlas exited; CPU time 45824.550456
07:04:08 (890094): called boinc_finish(0)

</stderr_txt>
]]>

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