Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:00 (3268104): wrapper (7.7.26015): starting
13:24:00 (3268104): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 13:24:00] Arguments: --nthreads 4
[2025-10-12 13:24:00] Threads: 4
[2025-10-12 13:24:00] Checking for CVMFS
[2025-10-12 13:24:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:24:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:24:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:24:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:24:00] 2.9.2.0 1857307 4078 96708 151619 2 56 29689689 36864001 0 130560 0 3667128 99.992 140429 857 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 13:24:00] CVMFS is ok
[2025-10-12 13:24:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:24:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:24:00] Further information can be found at the LHC@home message board.
[2025-10-12 13:24:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:24:00] Checking for apptainer binary...
[2025-10-12 13:24:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:24:00] Running /usr/bin/apptainer --version
[2025-10-12 13:24:00] apptainer version 1.4.1-1.1
[2025-10-12 13:24:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:24:00] thA319a
[2025-10-12 13:24:00] apptainer works
[2025-10-12 13:24:00] Set ATHENA_PROC_NUMBER=4
[2025-10-12 13:24:00] Set ATHENA_CORE_NUMBER=4
[2025-10-12 13:24:00] Starting ATLAS job with PandaID=6838852031
[2025-10-12 13:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:35:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:35:29] 2025-10-12 12:34:57,378 | INFO     | did not find any defunct processes belonging to 3278463
[2025-10-12 14:35:29] 2025-10-12 12:34:57,378 | INFO     | ready for new job
[2025-10-12 14:35:29] 2025-10-12 12:34:57,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:35:29] 2025-10-12 12:34:57,378 | INFO     | ***************************************
[2025-10-12 14:35:29] 2025-10-12 12:34:57,379 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:35:29] 2025-10-12 12:34:57,379 | INFO     | ***************************************
[2025-10-12 14:35:29] 2025-10-12 12:34:57,379 | INFO     | 
[2025-10-12 14:35:29] 2025-10-12 12:34:57,379 | INFO     | architecture information:
[2025-10-12 14:35:29] 2025-10-12 12:34:57,379 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:35:29] 2025-10-12 12:34:57,393 | INFO     | cat /etc/os-release:
[2025-10-12 14:35:29] NAME="CentOS Linux"
[2025-10-12 14:35:29] VERSION="7 (Core)"
[2025-10-12 14:35:29] ID="centos"
[2025-10-12 14:35:29] ID_LIKE="rhel fedora"
[2025-10-12 14:35:29] VERSION_ID="7"
[2025-10-12 14:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:35:29] ANSI_COLOR="0;31"
[2025-10-12 14:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:35:29] HOME_URL="https://www.centos.org/"
[2025-10-12 14:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:35:29] 
[2025-10-12 14:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:35:29] 
[2025-10-12 14:35:29] 2025-10-12 12:34:57,393 | INFO     | ***************************************
[2025-10-12 14:35:29] 2025-10-12 12:34:57,897 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | INFO     | sufficient remaining disk space (329908224000 B)
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | INFO     | update_server=False
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:35:29] 2025-10-12 12:34:57,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:29] 2025-10-12 12:34:57,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:29] 2025-10-12 12:34:57,916 | INFO     | aborting loop
[2025-10-12 14:35:29] 2025-10-12 12:34:58,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:35:29] 2025-10-12 12:34:58,104 | INFO     | all job control threads have been joined
[2025-10-12 14:35:29] 2025-10-12 12:34:58,207 | INFO     | all data control threads have been joined
[2025-10-12 14:35:29] 2025-10-12 12:34:58,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:35:29] 2025-10-12 12:34:58,833 | INFO     | all payload control threads have been joined
[2025-10-12 14:35:29] 2025-10-12 12:34:58,921 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:58,921 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:58,922 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,110 | INFO     | [job] control thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,213 | INFO     | [data] control thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,550 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,590 | INFO     | [job] validate thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,689 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,790 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,839 | INFO     | [payload] control thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:34:59,904 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:00,023 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:00,193 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:00,457 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:02,791 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:08,224 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:35:29] 2025-10-12 12:35:09,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:35:29] 2025-10-12 12:35:13,102 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:35:29] 2025-10-12 12:35:13,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789091972928)>', '<ExcThread(monitor, started 139788124399360)>']
[2025-10-12 14:35:29] 2025-10-12 12:35:18,849 | INFO     | all workflow threads have been joined
[2025-10-12 14:35:29] 2025-10-12 12:35:18,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:35:29] 2025-10-12 12:35:18,850 | INFO     | traces error code: 0
[2025-10-12 14:35:29] 2025-10-12 12:35:18,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | INFO     | PID=3271903 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 14:35:29] 2025-10-12 12:35:28,968 | INFO     | [monitor] control thread has ended
[2025-10-12 14:35:29] 2025-10-12 12:35:29,044 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:35:29] 2025-10-12 12:35:29,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:35:29] 2025-10-12 12:35:29,052 [wrapper] pilotpid: 3271903
[2025-10-12 14:35:29] 2025-10-12 12:35:29,056 [wrapper] Pilot exit status: 0
[2025-10-12 14:35:29] 2025-10-12 12:35:29,068 [wrapper] pandaids: 6838852031
[2025-10-12 14:35:29] 2025-10-12 12:35:29,090 [wrapper] cleanup supervisor_pilot 3288008 3271904
[2025-10-12 14:35:29] 2025-10-12 12:35:29,094 [wrapper] Test setup, not cleaning
[2025-10-12 14:35:29] 2025-10-12 12:35:29,098 [wrapper] apfmon messages muted
[2025-10-12 14:35:29] 2025-10-12 12:35:29,101 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:35:29] 2025-10-12 12:35:29,105 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:35:29]  *** Error codes and diagnostics ***
[2025-10-12 14:35:29]     "exeErrorCode": 0,
[2025-10-12 14:35:29]     "exeErrorDiag": "",
[2025-10-12 14:35:29]     "pilotErrorCode": 0,
[2025-10-12 14:35:29]     "pilotErrorDiag": "",
[2025-10-12 14:35:29]  *** Listing of results directory ***
[2025-10-12 14:35:29] total 406064
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc    557409 Oct 11 21:59 pilot3.tar.gz
[2025-10-12 14:35:29] -rwx------ 1 boinc boinc     36292 Oct 11 22:01 runpilot2-wrapper.sh
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:01 queuedata.json
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:35:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:24 run_atlas
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:24 job.xml
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc 221084919 Oct 12 13:24 EVNT.46676267._002577.pool.root.1
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc    569676 Oct 12 13:24 input.tar.gz
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:24 start_atlas.sh
[2025-10-12 14:35:29] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:24 shared
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:24 boinc_setup_complete
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      6367 Oct 12 13:24 init_data.xml
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:24 boinc_lockfile
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      2549 Oct 12 13:24 pandaJob.out
[2025-10-12 14:35:29] -rw------- 1 boinc boinc    975520 Oct 12 13:24 agis_schedconf.cvmfs.json
[2025-10-12 14:35:29] -rw------- 1 boinc boinc   1560580 Oct 12 13:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:35:29] drwx------ 5 boinc boinc      4096 Oct 12 13:24 pilot3
[2025-10-12 14:35:29] -rw------- 1 boinc boinc        95 Oct 12 14:34 pilot_heartbeat.json
[2025-10-12 14:35:29] -rw------- 1 boinc boinc 189034393 Oct 12 14:34 HITS.46676269._064126.pool.root.1
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc       530 Oct 12 14:34 boinc_task_state.xml
[2025-10-12 14:35:29] -rw------- 1 boinc boinc      1022 Oct 12 14:34 memory_monitor_summary.json
[2025-10-12 14:35:29] -rw------- 1 boinc boinc    266483 Oct 12 14:34 log.46676269._064126.job.log.tgz.1
[2025-10-12 14:35:29] -rw------- 1 boinc boinc      7769 Oct 12 14:34 heartbeat.json
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:34 boinc_mmap_file
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:34 wrapper_checkpoint.txt
[2025-10-12 14:35:29] -rw------- 1 boinc boinc       817 Oct 12 14:35 pilotlog.txt
[2025-10-12 14:35:29] -rw------- 1 boinc boinc    631193 Oct 12 14:35 log.46676269._064126.job.log.1
[2025-10-12 14:35:29] -rw------- 1 boinc boinc       357 Oct 12 14:35 output.list
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:35 runtime_log
[2025-10-12 14:35:29] -rw------- 1 boinc boinc    921600 Oct 12 14:35 result.tar.gz
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      8782 Oct 12 14:35 runtime_log.err
[2025-10-12 14:35:29] -rw------- 1 boinc boinc       659 Oct 12 14:35 3y7KDmIxuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXVSMDm6nDR8m.diag
[2025-10-12 14:35:29] -rw-r--r-- 1 boinc boinc      9827 Oct 12 14:35 stderr.txt
[2025-10-12 14:35:29] HITS file was successfully produced:
[2025-10-12 14:35:29] -rw------- 1 boinc boinc 189034393 Oct 12 14:34 shared/HITS.pool.root.1
[2025-10-12 14:35:29]  *** Contents of shared directory: ***
[2025-10-12 14:35:29] total 401992
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc 221084919 Oct 12 13:24 ATLAS.root_0
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc    569676 Oct 12 13:24 input.tar.gz
[2025-10-12 14:35:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:24 start_atlas.sh
[2025-10-12 14:35:29] -rw------- 1 boinc boinc 189034393 Oct 12 14:34 HITS.pool.root.1
[2025-10-12 14:35:29] -rw------- 1 boinc boinc    921600 Oct 12 14:35 result.tar.gz
14:35:30 (3268104): run_atlas exited; CPU time 15803.434225
14:35:30 (3268104): called boinc_finish(0)

</stderr_txt>
]]>

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