Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:23 (3308370): wrapper (7.7.26015): starting
00:00:23 (3308370): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:00:23] Arguments: --nthreads 12
[2025-10-12 00:00:23] Threads: 12
[2025-10-12 00:00:23] Checking for CVMFS
[2025-10-12 00:00:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:00:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:00:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:00:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:00:26] 2.13.2.0 128745 115468 149648 151606 0 291 38412015 39288833 9238 16776704 0 64692443 99.774 42017093 35893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:00:26] CVMFS is ok
[2025-10-12 00:00:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:00:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:00:26] Further information can be found at the LHC@home message board.
[2025-10-12 00:00:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:00:26] Checking for apptainer binary...
[2025-10-12 00:00:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:00:26] Running /usr/bin/apptainer --version
[2025-10-12 00:00:26] apptainer version 1.4.3-1.el9
[2025-10-12 00:00:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:00:26] c-211-4.aglt2.org
[2025-10-12 00:00:26] apptainer works
[2025-10-12 00:00:26] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:00:26] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:00:26] Starting ATLAS job with PandaID=6838634628
[2025-10-12 00:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:20:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:20:16] 2025-10-12 07:19:17,666 | INFO     | monitor loop #769: job 0:6838634628 is in state 'finished'
[2025-10-12 03:20:16] 2025-10-12 07:19:17,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,123 | INFO     | time since job start (11850s) is within the limit (172800.0s)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 03:20:16] 2025-10-12 07:19:19,594 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.7511999999997
[2025-10-12 03:20:16] 2025-10-12 07:19:19,601 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838634628/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,602 | INFO     | extracted standard info from prmon json
[2025-10-12 03:20:16] 2025-10-12 07:19:19,602 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:20:16] 2025-10-12 07:19:19,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:20:16] 2025-10-12 07:19:19,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:20:16] 2025-10-12 07:19:19,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:20:16] 2025-10-12 07:19:19,607 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:20:16] 2025-10-12 07:19:19,607 | INFO     | sum of square deviations: 2194957035.9166555
[2025-10-12 03:20:16] 2025-10-12 07:19:19,608 | INFO     | sum of deviations: 39711954882.708405
[2025-10-12 03:20:16] 2025-10-12 07:19:19,609 | INFO     | mean x: 1760247713.5208333
[2025-10-12 03:20:16] 2025-10-12 07:19:19,609 | INFO     | mean y: 2643503.3229166665
[2025-10-12 03:20:16] 2025-10-12 07:19:19,609 | INFO     | -- intersect: -31844393426.280216
[2025-10-12 03:20:16] 2025-10-12 07:19:19,609 | INFO     | intersect: -31844393426.280216
[2025-10-12 03:20:16] 2025-10-12 07:19:19,609 | INFO     | chi2: 3.3380766236756525
[2025-10-12 03:20:16] 2025-10-12 07:19:19,610 | INFO     | sum of square deviations: 2028039664.9518752
[2025-10-12 03:20:16] 2025-10-12 07:19:19,611 | INFO     | sum of deviations: 51361138175.17116
[2025-10-12 03:20:16] 2025-10-12 07:19:19,611 | INFO     | mean x: 1760247561.0748663
[2025-10-12 03:20:16] 2025-10-12 07:19:19,611 | INFO     | mean y: 2653889.8449197863
[2025-10-12 03:20:16] 2025-10-12 07:19:19,611 | INFO     | -- intersect: -44576512765.17197
[2025-10-12 03:20:16] 2025-10-12 07:19:19,612 | INFO     | intersect: -44576512765.17197
[2025-10-12 03:20:16] 2025-10-12 07:19:19,612 | INFO     | chi2: 2.652034055456191
[2025-10-12 03:20:16] 2025-10-12 07:19:19,612 | INFO     | current chi2=2.652034055456191 (change=20.55203177044031 %)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,612 | INFO     | right removable region: 186
[2025-10-12 03:20:16] 2025-10-12 07:19:19,613 | INFO     | sum of square deviations: 2027802984.9518752
[2025-10-12 03:20:16] 2025-10-12 07:19:19,614 | INFO     | sum of deviations: -9425425460.427807
[2025-10-12 03:20:16] 2025-10-12 07:19:19,614 | INFO     | mean x: 1760247866.0748663
[2025-10-12 03:20:16] 2025-10-12 07:19:19,614 | INFO     | mean y: 2688071.887700535
[2025-10-12 03:20:16] 2025-10-12 07:19:19,614 | INFO     | -- intersect: 8184491322.34475
[2025-10-12 03:20:16] 2025-10-12 07:19:19,615 | INFO     | intersect: 8184491322.34475
[2025-10-12 03:20:16] 2025-10-12 07:19:19,615 | INFO     | chi2: 0.8528760909985853
[2025-10-12 03:20:16] 2025-10-12 07:19:19,615 | INFO     | current chi2=0.8528760909985853 (change=74.4500744845258 %)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,615 | INFO     | sum of square deviations: 1869380263.0769258
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | sum of deviations: -11008611846.76923
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | mean x: 1760248018.6153846
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | mean y: 2689463.9175824174
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | -- intersect: 10368631361.199707
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | intersect: 10368631361.199707
[2025-10-12 03:20:16] 2025-10-12 07:19:19,617 | INFO     | chi2: 0.777952776847894
[2025-10-12 03:20:16] 2025-10-12 07:19:19,618 | INFO     | current chi2=0.777952776847894 (change=8.78478303489171 %)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,618 | INFO     | left removable region: 20
[2025-10-12 03:20:16] 2025-10-12 07:19:19,618 | INFO     | sum of square deviations: 1418367053.8313262
[2025-10-12 03:20:16] 2025-10-12 07:19:19,619 | INFO     | sum of deviations: 5412191047.120482
[2025-10-12 03:20:16] 2025-10-12 07:19:19,619 | INFO     | mean x: 1760248140.8072288
[2025-10-12 03:20:16] 2025-10-12 07:19:19,619 | INFO     | mean y: 2697466.56626506
[2025-10-12 03:20:16] 2025-10-12 07:19:19,620 | INFO     | -- intersect: -6714040068.08906
[2025-10-12 03:20:16] 2025-10-12 07:19:19,620 | INFO     | intersect: -6714040068.08906
[2025-10-12 03:20:16] 2025-10-12 07:19:19,620 | INFO     | chi2: 0.001137461954592655
[2025-10-12 03:20:16] 2025-10-12 07:19:19,620 | INFO     | -- intersect: -6714040068.08906
[2025-10-12 03:20:16] 2025-10-12 07:19:19,620 | INFO     | current memory leak: 3.82 B/s (using 166 data points, chi2=0.00)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,621 | INFO     | could have reported an average CPU frequency of 2599 MHz (10 samples)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,621 | INFO     | ..............................
[2025-10-12 03:20:16] 2025-10-12 07:19:19,621 | INFO     | . Timing measurements:
[2025-10-12 03:20:16] 2025-10-12 07:19:19,621 | INFO     | . get job = 0 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,621 | INFO     | . initial setup = 5 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | . payload setup = 54 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | . stage-in = 0 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | . payload execution = 11697 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | . stage-out = 2 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | . log creation = 0 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,622 | INFO     | ..............................
[2025-10-12 03:20:16] 2025-10-12 07:19:19,850 | INFO     | 
[2025-10-12 03:20:16] 2025-10-12 07:19:19,851 | INFO     | job summary report
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | --------------------------------------------------
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | PanDA job id: 6838634628
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | task id: 46676269
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | errors: (none)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | pilot state: finished 
[2025-10-12 03:20:16] 2025-10-12 07:19:19,852 | INFO     | transexitcode: 0
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | exeerrorcode: 0
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | exeerrordiag: 
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | exitcode: 0
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | exitmsg: OK
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | cpuconsumptiontime: 51963 s
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | nevents: 400
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | neventsw: 0
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | pid: 3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | pgrp: 3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:19,853 | INFO     | corecount: 12
[2025-10-12 03:20:16] 2025-10-12 07:19:19,854 | INFO     | event service: False
[2025-10-12 03:20:16] 2025-10-12 07:19:19,854 | INFO     | sizes: {0: 2348027, 1: 2348628, 2: 2348740, 3: 2348911, 4: 2348939, 5: 2348967, 16: 2349151, 27: 2349179, 38: 2349207, 42: 2349497, 50: 2349553, 11755: 2379317, 11
[2025-10-12 03:20:16] 2025-10-12 07:19:19,854 | INFO     | --------------------------------------------------
[2025-10-12 03:20:16] 2025-10-12 07:19:19,854 | INFO     | 
[2025-10-12 03:20:16] 2025-10-12 07:19:19,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 03:20:16] 2025-10-12 07:19:19,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:20:16] 2025-10-12 07:19:19,880 | INFO     | job 6838634628 has completed (purged errors)
[2025-10-12 03:20:16] 2025-10-12 07:19:19,880 | INFO     | overall cleanup function is called
[2025-10-12 03:20:16] 2025-10-12 07:19:20,889 | INFO     | --- collectZombieJob: --- 10, [3319405]
[2025-10-12 03:20:16] 2025-10-12 07:19:20,890 | INFO     | zombie collector waiting for pid 3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:20,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:20:16] 2025-10-12 07:19:20,890 | INFO     | collected zombie processes
[2025-10-12 03:20:16] 2025-10-12 07:19:20,890 | INFO     | will attempt to kill all subprocesses of pid=3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:21,170 | INFO     | process IDs to be killed: [3319405] (in reverse order)
[2025-10-12 03:20:16] 2025-10-12 07:19:21,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:20:16] 2025-10-12 07:19:21,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:20:16] 2025-10-12 07:19:21,255 | INFO     | did not find any defunct processes belonging to 3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:21,266 | INFO     | did not find any defunct processes belonging to 3319405
[2025-10-12 03:20:16] 2025-10-12 07:19:21,266 | INFO     | ready for new job
[2025-10-12 03:20:16] 2025-10-12 07:19:21,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:20:16] 2025-10-12 07:19:21,268 | INFO     | ***************************************
[2025-10-12 03:20:16] 2025-10-12 07:19:21,269 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:20:16] 2025-10-12 07:19:21,269 | INFO     | ***************************************
[2025-10-12 03:20:16] 2025-10-12 07:19:21,269 | INFO     | 
[2025-10-12 03:20:16] 2025-10-12 07:19:21,271 | INFO     | architecture information:
[2025-10-12 03:20:16] 2025-10-12 07:19:21,272 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:20:16] 2025-10-12 07:19:21,292 | INFO     | cat /etc/os-release:
[2025-10-12 03:20:16] NAME="CentOS Linux"
[2025-10-12 03:20:16] VERSION="7 (Core)"
[2025-10-12 03:20:16] ID="centos"
[2025-10-12 03:20:16] ID_LIKE="rhel fedora"
[2025-10-12 03:20:16] VERSION_ID="7"
[2025-10-12 03:20:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:20:16] ANSI_COLOR="0;31"
[2025-10-12 03:20:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:20:16] HOME_URL="https://www.centos.org/"
[2025-10-12 03:20:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:20:16] 
[2025-10-12 03:20:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:20:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:20:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:20:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:20:16] 
[2025-10-12 03:20:16] 2025-10-12 07:19:21,293 | INFO     | ***************************************
[2025-10-12 03:20:16] 2025-10-12 07:19:21,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 03:20:16] 2025-10-12 07:19:21,815 | INFO     | sufficient remaining disk space (52998176768 B)
[2025-10-12 03:20:16] 2025-10-12 07:19:21,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:20:16] 2025-10-12 07:19:21,816 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:20:16] 2025-10-12 07:19:21,816 | INFO     | update_server=False
[2025-10-12 03:20:16] 2025-10-12 07:19:21,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:20:16] 2025-10-12 07:19:21,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:20:16] 2025-10-12 07:19:21,816 | INFO     | aborting loop
[2025-10-12 03:20:16] 2025-10-12 07:19:22,091 | INFO     | all payload control threads have been joined
[2025-10-12 03:20:16] 2025-10-12 07:19:22,466 | INFO     | all job control threads have been joined
[2025-10-12 03:20:16] 2025-10-12 07:19:22,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:20:16] 2025-10-12 07:19:22,686 | INFO     | all data control threads have been joined
[2025-10-12 03:20:16] 2025-10-12 07:19:22,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:20:16] 2025-10-12 07:19:22,824 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:22,825 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:22,951 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,098 | INFO     | [payload] control thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,240 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,324 | INFO     | [job] validate thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,472 | INFO     | [job] control thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,696 | INFO     | [data] control thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:23,813 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:24,279 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:24,323 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:24,333 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:24,651 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:24,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:20:16] 2025-10-12 07:19:25,761 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:26,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:20:16] 2025-10-12 07:19:52,537 | INFO     | PID=3312185 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:20:16] 2025-10-12 07:19:52,537 | INFO     | .. there are 7 such processes running
[2025-10-12 03:20:16] 2025-10-12 07:19:52,538 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:20:16] 2025-10-12 07:19:52,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:20:16] 2025-10-12 07:19:52,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:20:16] 2025-10-12 07:20:09,516 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:20:16] 2025-10-12 07:20:09,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673797130048)>', '<ExcThread(monitor, started 139673435350784)>']
[2025-10-12 03:20:16] 2025-10-12 07:20:10,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:20:16] 2025-10-12 07:20:10,648 | INFO     | [monitor] control thread has ended
[2025-10-12 03:20:16] 2025-10-12 07:20:14,851 | INFO     | all workflow threads have been joined
[2025-10-12 03:20:16] 2025-10-12 07:20:14,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:20:16] 2025-10-12 07:20:14,853 | INFO     | traces error code: 0
[2025-10-12 03:20:16] 2025-10-12 07:20:14,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:20:16] 2025-10-12 07:20:15,962 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:20:16] 2025-10-12 07:20:15,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:20:16] 2025-10-12 07:20:15,981 [wrapper] pilotpid: 3312185
[2025-10-12 03:20:16] 2025-10-12 07:20:15,992 [wrapper] Pilot exit status: 0
[2025-10-12 03:20:16] 2025-10-12 07:20:16,009 [wrapper] pandaids: 6838634628
[2025-10-12 03:20:16] 2025-10-12 07:20:16,059 [wrapper] cleanup supervisor_pilot 3591588 3312186
[2025-10-12 03:20:16] 2025-10-12 07:20:16,068 [wrapper] Test setup, not cleaning
[2025-10-12 03:20:16] 2025-10-12 07:20:16,075 [wrapper] apfmon messages muted
[2025-10-12 03:20:16] 2025-10-12 07:20:16,081 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:20:16] 2025-10-12 07:20:16,085 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:20:16]  *** Error codes and diagnostics ***
[2025-10-12 03:20:16]     "exeErrorCode": 0,
[2025-10-12 03:20:16]     "exeErrorDiag": "",
[2025-10-12 03:20:16]     "pilotErrorCode": 0,
[2025-10-12 03:20:16]     "pilotErrorDiag": "",
[2025-10-12 03:20:16]  *** Listing of results directory ***
[2025-10-12 03:20:16] total 419504
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:18 pilot3.tar.gz
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:28 queuedata.json
[2025-10-12 03:20:16] -rwx------. 1 boincer umatlas     36292 Oct 11 13:28 runpilot2-wrapper.sh
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:20:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas 222116563 Oct 12 00:00 EVNT.46676267._002488.pool.root.1
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 03:20:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:00 shared
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:00 input.tar.gz
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:00 boinc_lockfile
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:00 pandaJob.out
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas    975512 Oct 12 00:01 agis_schedconf.cvmfs.json
[2025-10-12 03:20:16] drwx------. 5 boincer umatlas      4096 Oct 12 00:01 pilot3
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas 199536623 Oct 12 03:18 HITS.46676269._061923.pool.root.1
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas       530 Oct 12 03:18 boinc_task_state.xml
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas      1042 Oct 12 03:19 memory_monitor_summary.json
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas   1560580 Oct 12 03:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas    470347 Oct 12 03:19 log.46676269._061923.job.log.tgz.1
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas      7824 Oct 12 03:19 heartbeat.json
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas        95 Oct 12 03:19 pilot_heartbeat.json
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas      6658 Oct 12 03:19 init_data.xml
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas      4823 Oct 12 03:20 pilotlog.txt
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas        27 Oct 12 03:20 wrapper_checkpoint.txt
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas   1542046 Oct 12 03:20 log.46676269._061923.job.log.1
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 03:20 boinc_mmap_file
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas       357 Oct 12 03:20 output.list
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas       620 Oct 12 03:20 runtime_log
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas   2027520 Oct 12 03:20 result.tar.gz
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 03:20 runtime_log.err
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas       654 Oct 12 03:20 mFsNDm2ZsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhKSMDm75WVUo.diag
[2025-10-12 03:20:16] -rw-r--r--. 1 boincer umatlas     21250 Oct 12 03:20 stderr.txt
[2025-10-12 03:20:16] HITS file was successfully produced:
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas 199536623 Oct 12 03:18 shared/HITS.pool.root.1
[2025-10-12 03:20:16]  *** Contents of shared directory: ***
[2025-10-12 03:20:16] total 414332
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas 222116563 Oct 12 00:00 ATLAS.root_0
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 03:20:16] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:00 input.tar.gz
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas 199536623 Oct 12 03:18 HITS.pool.root.1
[2025-10-12 03:20:16] -rw-------. 1 boincer umatlas   2027520 Oct 12 03:20 result.tar.gz
03:20:18 (3308370): run_atlas exited; CPU time 52188.976602
03:20:18 (3308370): called boinc_finish(0)

</stderr_txt>
]]>

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