Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:39:36 (3296862): wrapper (7.7.26015): starting
22:39:36 (3296862): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:39:36] Arguments: --nthreads 8
[2025-10-11 22:39:36] Threads: 8
[2025-10-11 22:39:36] Checking for CVMFS
[2025-10-11 22:39:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:39:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:39:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:39:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:39:40] 2.13.2.0 3526814 59840 380400 151604 3 533 32608350 32935937 36380 16776704 0 100649129 99.549 107148469 8104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:39:40] CVMFS is ok
[2025-10-11 22:39:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:39:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:39:40] Further information can be found at the LHC@home message board.
[2025-10-11 22:39:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:39:40] Checking for apptainer binary...
[2025-10-11 22:39:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:39:40] Running /usr/bin/apptainer --version
[2025-10-11 22:39:40] apptainer version 1.4.3-1.el9
[2025-10-11 22:39:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:39:41] c6-12-25-2.aglt2.org
[2025-10-11 22:39:41] apptainer works
[2025-10-11 22:39:41] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:39:41] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:39:41] Starting ATLAS job with PandaID=6838632981
[2025-10-11 22:39:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:30:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:30:02] 2025-10-12 14:28:51,255 | INFO     | chi2: 5.665616873151544
[2025-10-12 10:30:02] 2025-10-12 14:28:51,277 | INFO     | sum of square deviations: 99664067705.64981
[2025-10-12 10:30:02] 2025-10-12 14:28:51,472 | INFO     | sum of deviations: 466422017737.459
[2025-10-12 10:30:02] 2025-10-12 14:28:51,473 | INFO     | mean x: 1760258025.2992702
[2025-10-12 10:30:02] 2025-10-12 14:28:51,473 | INFO     | mean y: 2204344.719708029
[2025-10-12 10:30:02] 2025-10-12 14:28:51,473 | INFO     | -- intersect: -8235700436.80566
[2025-10-12 10:30:02] 2025-10-12 14:28:51,473 | INFO     | intersect: -8235700436.80566
[2025-10-12 10:30:02] 2025-10-12 14:28:51,499 | INFO     | chi2: 4.160861678484343
[2025-10-12 10:30:02] 2025-10-12 14:28:51,500 | INFO     | current chi2=4.160861678484343 (change=26.559423772510915 %)
[2025-10-12 10:30:02] 2025-10-12 14:28:51,523 | INFO     | sum of square deviations: 97497540646.19861
[2025-10-12 10:30:02] 2025-10-12 14:28:51,614 | INFO     | time since job start (42426s) is within the limit (172800.0s)
[2025-10-12 10:30:02] 2025-10-12 14:28:51,627 | INFO     | sum of deviations: 463510289231.6246
[2025-10-12 10:30:02] 2025-10-12 14:28:51,628 | INFO     | mean x: 1760257872.8014705
[2025-10-12 10:30:02] 2025-10-12 14:28:51,629 | INFO     | mean y: 2204139.775
[2025-10-12 10:30:02] 2025-10-12 14:28:51,629 | INFO     | -- intersect: -8366187825.158789
[2025-10-12 10:30:02] 2025-10-12 14:28:51,629 | INFO     | intersect: -8366187825.158789
[2025-10-12 10:30:02] 2025-10-12 14:28:51,636 | INFO     | chi2: 4.159013419343494
[2025-10-12 10:30:02] 2025-10-12 14:28:51,637 | INFO     | current chi2=4.159013419343494 (change=0.04442010534515845 %)
[2025-10-12 10:30:02] 2025-10-12 14:28:51,637 | INFO     | right removable region: 679
[2025-10-12 10:30:02] 2025-10-12 14:28:51,644 | INFO     | sum of square deviations: 99663732692.04965
[2025-10-12 10:30:02] 2025-10-12 14:28:51,828 | INFO     | sum of deviations: 220343730376.66132
[2025-10-12 10:30:02] 2025-10-12 14:28:51,829 | INFO     | mean x: 1760258330.30073
[2025-10-12 10:30:02] 2025-10-12 14:28:51,829 | INFO     | mean y: 2210562.4773722626
[2025-10-12 10:30:02] 2025-10-12 14:28:51,830 | INFO     | -- intersect: -3889494839.7626595
[2025-10-12 10:30:02] 2025-10-12 14:28:51,830 | INFO     | intersect: -3889494839.7626595
[2025-10-12 10:30:02] 2025-10-12 14:28:51,854 | INFO     | chi2: 2.890263737637738
[2025-10-12 10:30:02] 2025-10-12 14:28:51,855 | INFO     | current chi2=2.890263737637738 (change=48.98589505170677 %)
[2025-10-12 10:30:02] 2025-10-12 14:28:51,885 | INFO     | sum of square deviations: 97497038120.98685
[2025-10-12 10:30:02] 2025-10-12 14:28:52,296 | INFO     | sum of deviations: 128176093675.74399
[2025-10-12 10:30:02] 2025-10-12 14:28:52,296 | INFO     | mean x: 1760258482.8044116
[2025-10-12 10:30:02] 2025-10-12 14:28:52,297 | INFO     | mean y: 2217043.8852941175
[2025-10-12 10:30:02] 2025-10-12 14:28:52,297 | INFO     | -- intersect: -2311935883.5654783
[2025-10-12 10:30:02] 2025-10-12 14:28:52,297 | INFO     | intersect: -2311935883.5654783
[2025-10-12 10:30:02] 2025-10-12 14:28:52,341 | INFO     | chi2: 2.0879772375539773
[2025-10-12 10:30:02] 2025-10-12 14:28:52,342 | INFO     | current chi2=2.0879772375539773 (change=27.75824536827505 %)
[2025-10-12 10:30:02] 2025-10-12 14:28:52,365 | INFO     | sum of square deviations: 95362138212.34663
[2025-10-12 10:30:02] 2025-10-12 14:28:52,562 | INFO     | sum of deviations: 81783785017.2179
[2025-10-12 10:30:02] 2025-10-12 14:28:52,602 | INFO     | mean x: 1760258635.3022223
[2025-10-12 10:30:02] 2025-10-12 14:28:52,602 | INFO     | mean y: 2220357.788148148
[2025-10-12 10:30:02] 2025-10-12 14:28:52,602 | INFO     | -- intersect: -1507399880.4210196
[2025-10-12 10:30:02] 2025-10-12 14:28:52,603 | INFO     | intersect: -1507399880.4210196
[2025-10-12 10:30:02] 2025-10-12 14:28:52,621 | INFO     | chi2: 1.9037099853499542
[2025-10-12 10:30:02] 2025-10-12 14:28:52,622 | INFO     | current chi2=1.9037099853499542 (change=8.825156179379068 %)
[2025-10-12 10:30:02] 2025-10-12 14:28:52,627 | INFO     | left removable region: 30
[2025-10-12 10:30:02] 2025-10-12 14:28:52,630 | INFO     | sum of square deviations: 84761305763.87666
[2025-10-12 10:30:02] 2025-10-12 14:28:52,785 | INFO     | sum of deviations: 101511120298.85979
[2025-10-12 10:30:02] 2025-10-12 14:28:52,786 | INFO     | mean x: 1760258757.3143296
[2025-10-12 10:30:02] 2025-10-12 14:28:52,786 | INFO     | mean y: 2230244.907550077
[2025-10-12 10:30:02] 2025-10-12 14:28:52,787 | INFO     | -- intersect: -2105876005.4684107
[2025-10-12 10:30:02] 2025-10-12 14:28:52,787 | INFO     | intersect: -2105876005.4684107
[2025-10-12 10:30:02] 2025-10-12 14:28:52,813 | INFO     | chi2: 0.22599240847963362
[2025-10-12 10:30:02] 2025-10-12 14:28:52,814 | INFO     | -- intersect: -2105876005.4684107
[2025-10-12 10:30:02] 2025-10-12 14:28:52,814 | INFO     | current memory leak: 1.20 B/s (using 649 data points, chi2=0.23)
[2025-10-12 10:30:02] 2025-10-12 14:28:52,839 | INFO     | could have reported an average CPU frequency of 999 MHz (26 samples)
[2025-10-12 10:30:02] 2025-10-12 14:28:52,840 | INFO     | ..............................
[2025-10-12 10:30:02] 2025-10-12 14:28:52,840 | INFO     | . Timing measurements:
[2025-10-12 10:30:02] 2025-10-12 14:28:52,840 | INFO     | . get job = 4 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,840 | INFO     | . initial setup = 20 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,840 | INFO     | . payload setup = 72 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,841 | INFO     | . stage-in = 1 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,841 | INFO     | . payload execution = 42140 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,864 | INFO     | . stage-out = 15 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,864 | INFO     | . log creation = 3 s
[2025-10-12 10:30:02] 2025-10-12 14:28:52,864 | INFO     | ..............................
[2025-10-12 10:30:02] 2025-10-12 14:28:53,694 | INFO     | time since job start (42428s) is within the limit (172800.0s)
[2025-10-12 10:30:02] 2025-10-12 14:28:54,453 | INFO     | 
[2025-10-12 10:30:02] 2025-10-12 14:28:54,454 | INFO     | job summary report
[2025-10-12 10:30:02] 2025-10-12 14:28:54,454 | INFO     | --------------------------------------------------
[2025-10-12 10:30:02] 2025-10-12 14:28:54,454 | INFO     | PanDA job id: 6838632981
[2025-10-12 10:30:02] 2025-10-12 14:28:54,455 | INFO     | task id: 46676269
[2025-10-12 10:30:02] 2025-10-12 14:28:54,455 | INFO     | errors: (none)
[2025-10-12 10:30:02] 2025-10-12 14:28:54,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:30:02] 2025-10-12 14:28:54,455 | INFO     | pilot state: finished 
[2025-10-12 10:30:02] 2025-10-12 14:28:54,456 | INFO     | transexitcode: 0
[2025-10-12 10:30:02] 2025-10-12 14:28:54,456 | INFO     | exeerrorcode: 0
[2025-10-12 10:30:02] 2025-10-12 14:28:54,456 | INFO     | exeerrordiag: 
[2025-10-12 10:30:02] 2025-10-12 14:28:54,456 | INFO     | exitcode: 0
[2025-10-12 10:30:02] 2025-10-12 14:28:54,457 | INFO     | exitmsg: OK
[2025-10-12 10:30:02] 2025-10-12 14:28:54,457 | INFO     | cpuconsumptiontime: 112473 s
[2025-10-12 10:30:02] 2025-10-12 14:28:54,477 | INFO     | nevents: 400
[2025-10-12 10:30:02] 2025-10-12 14:28:54,478 | INFO     | neventsw: 0
[2025-10-12 10:30:02] 2025-10-12 14:28:54,478 | INFO     | pid: 3322661
[2025-10-12 10:30:02] 2025-10-12 14:28:54,478 | INFO     | pgrp: 3322661
[2025-10-12 10:30:02] 2025-10-12 14:28:54,478 | INFO     | corecount: 8
[2025-10-12 10:30:02] 2025-10-12 14:28:54,479 | INFO     | event service: False
[2025-10-12 10:30:02] 2025-10-12 14:28:54,479 | INFO     | sizes: {0: 2348029, 2: 2348630, 4: 2348714, 8: 2348742, 10: 2348941, 11: 2348969, 12: 2349125, 25: 2349153, 37: 2349181, 50: 2349209, 65: 2349439, 68: 2349807, 76:
[2025-10-12 10:30:02] 2025-10-12 14:28:54,479 | INFO     | --------------------------------------------------
[2025-10-12 10:30:02] 2025-10-12 14:28:54,479 | INFO     | 
[2025-10-12 10:30:02] 2025-10-12 14:28:54,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 10:30:02] 2025-10-12 14:28:54,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:30:02] 2025-10-12 14:28:54,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:30:02] 2025-10-12 14:28:54,752 | INFO     | job 6838632981 has completed (purged errors)
[2025-10-12 10:30:02] 2025-10-12 14:28:54,753 | INFO     | overall cleanup function is called
[2025-10-12 10:30:02] 2025-10-12 14:28:55,771 | INFO     | --- collectZombieJob: --- 10, [3322661]
[2025-10-12 10:30:02] 2025-10-12 14:28:55,772 | INFO     | zombie collector waiting for pid 3322661
[2025-10-12 10:30:02] 2025-10-12 14:28:55,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:30:02] 2025-10-12 14:28:55,772 | INFO     | collected zombie processes
[2025-10-12 10:30:02] 2025-10-12 14:28:55,772 | INFO     | will attempt to kill all subprocesses of pid=3322661
[2025-10-12 10:30:02] 2025-10-12 14:29:04,763 | INFO     | process IDs to be killed: [3322661] (in reverse order)
[2025-10-12 10:30:02] 2025-10-12 14:29:07,175 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:30:02] 2025-10-12 14:29:07,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:30:02] 2025-10-12 14:29:07,339 | INFO     | did not find any defunct processes belonging to 3322661
[2025-10-12 10:30:02] 2025-10-12 14:29:07,944 | INFO     | did not find any defunct processes belonging to 3322661
[2025-10-12 10:30:02] 2025-10-12 14:29:07,954 | INFO     | ready for new job
[2025-10-12 10:30:02] 2025-10-12 14:29:07,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:30:02] 2025-10-12 14:29:08,094 | INFO     | ***************************************
[2025-10-12 10:30:02] 2025-10-12 14:29:08,095 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:30:02] 2025-10-12 14:29:08,095 | INFO     | ***************************************
[2025-10-12 10:30:02] 2025-10-12 14:29:08,095 | INFO     | 
[2025-10-12 10:30:02] 2025-10-12 14:29:08,185 | INFO     | architecture information:
[2025-10-12 10:30:02] 2025-10-12 14:29:08,208 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:30:02] 2025-10-12 14:29:08,541 | INFO     | cat /etc/os-release:
[2025-10-12 10:30:02] NAME="CentOS Linux"
[2025-10-12 10:30:02] VERSION="7 (Core)"
[2025-10-12 10:30:02] ID="centos"
[2025-10-12 10:30:02] ID_LIKE="rhel fedora"
[2025-10-12 10:30:02] VERSION_ID="7"
[2025-10-12 10:30:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:30:02] ANSI_COLOR="0;31"
[2025-10-12 10:30:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:30:02] HOME_URL="https://www.centos.org/"
[2025-10-12 10:30:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:30:02] 
[2025-10-12 10:30:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:30:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:30:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:30:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:30:02] 
[2025-10-12 10:30:02] 2025-10-12 14:29:08,542 | INFO     | ***************************************
[2025-10-12 10:30:02] 2025-10-12 14:29:09,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 10:30:02] 2025-10-12 14:29:09,280 | INFO     | sufficient remaining disk space (93714382848 B)
[2025-10-12 10:30:02] 2025-10-12 14:29:09,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:30:02] 2025-10-12 14:29:09,282 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:30:02] 2025-10-12 14:29:09,282 | INFO     | update_server=False
[2025-10-12 10:30:02] 2025-10-12 14:29:09,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:30:02] 2025-10-12 14:29:09,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:30:02] 2025-10-12 14:29:09,856 | INFO     | aborting loop
[2025-10-12 10:30:02] 2025-10-12 14:29:09,871 | INFO     | all job control threads have been joined
[2025-10-12 10:30:02] 2025-10-12 14:29:10,289 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,325 | INFO     | all payload control threads have been joined
[2025-10-12 10:30:02] 2025-10-12 14:29:10,341 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,357 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,375 | INFO     | all data control threads have been joined
[2025-10-12 10:30:02] 2025-10-12 14:29:10,484 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:30:02] 2025-10-12 14:29:10,691 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,902 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:10,957 | INFO     | [job] control thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:11,156 | INFO     | [job] validate thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:11,224 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:11,334 | INFO     | [payload] control thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:11,406 | INFO     | [data] control thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:11,636 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:30:02] 2025-10-12 14:29:11,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:30:02] 2025-10-12 14:29:11,972 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:12,014 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:12,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:30:02] 2025-10-12 14:29:12,674 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:13,115 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:15,825 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:30:02] 2025-10-12 14:29:16,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359258240832)>', '<ExcThread(monitor, started 140358751069952)>']
[2025-10-12 10:30:02] 2025-10-12 14:29:21,718 | INFO     | all workflow threads have been joined
[2025-10-12 10:30:02] 2025-10-12 14:29:21,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:30:02] 2025-10-12 14:29:21,720 | INFO     | traces error code: 0
[2025-10-12 10:30:02] 2025-10-12 14:29:21,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:30:02] 2025-10-12 14:29:47,187 | INFO     | PID=3311314 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:30:02] 2025-10-12 14:29:47,305 | INFO     | .. there are 39 such processes running
[2025-10-12 10:30:02] 2025-10-12 14:29:47,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:30:02] 2025-10-12 14:29:47,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:30:02] 2025-10-12 14:29:47,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:30:02] 2025-10-12 14:29:47,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:30:02] 2025-10-12 14:29:47,425 | INFO     | [monitor] control thread has ended
[2025-10-12 10:30:02] 2025-10-12 14:29:58,652 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:30:02] 2025-10-12 14:29:58,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:30:02] 2025-10-12 14:29:58,758 [wrapper] pilotpid: 3311314
[2025-10-12 10:30:02] 2025-10-12 14:29:58,837 [wrapper] Pilot exit status: 0
[2025-10-12 10:30:02] 2025-10-12 14:29:59,040 [wrapper] pandaids: 6838632981
[2025-10-12 10:30:02] 2025-10-12 14:30:00,581 [wrapper] cleanup supervisor_pilot  904337 3311315
[2025-10-12 10:30:02] 2025-10-12 14:30:00,649 [wrapper] Test setup, not cleaning
[2025-10-12 10:30:02] 2025-10-12 14:30:00,705 [wrapper] apfmon messages muted
[2025-10-12 10:30:02] 2025-10-12 14:30:00,837 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:30:02] 2025-10-12 14:30:00,970 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:30:02]  *** Error codes and diagnostics ***
[2025-10-12 10:30:02]     "exeErrorCode": 0,
[2025-10-12 10:30:02]     "exeErrorDiag": "",
[2025-10-12 10:30:02]     "pilotErrorCode": 0,
[2025-10-12 10:30:02]     "pilotErrorDiag": "",
[2025-10-12 10:30:02]  *** Listing of results directory ***
[2025-10-12 10:30:02] total 408844
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 10:30:02] -rwx------. 1 boincer umatlas     36292 Oct 11 12:40 runpilot2-wrapper.sh
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:40 queuedata.json
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:30:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:39 run_atlas
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:39 job.xml
[2025-10-12 10:30:02] -rw-r--r--. 2 boincer umatlas 220466347 Oct 11 22:39 EVNT.46676267._002457.pool.root.1
[2025-10-12 10:30:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:39 start_atlas.sh
[2025-10-12 10:30:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:39 shared
[2025-10-12 10:30:02] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 22:39 input.tar.gz
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:39 boinc_lockfile
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 22:39 pandaJob.out
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas    975496 Oct 11 22:41 agis_schedconf.cvmfs.json
[2025-10-12 10:30:02] drwx------. 5 boincer umatlas      4096 Oct 11 22:41 pilot3
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 10:19 init_data.xml
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas 186664706 Oct 12 10:24 HITS.46676269._061190.pool.root.1
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas       532 Oct 12 10:25 boinc_task_state.xml
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas      1046 Oct 12 10:27 memory_monitor_summary.json
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas    668408 Oct 12 10:27 log.46676269._061190.job.log.tgz.1
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas      7843 Oct 12 10:28 heartbeat.json
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas        96 Oct 12 10:29 pilot_heartbeat.json
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas       823 Oct 12 10:29 pilotlog.txt
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas   3142359 Oct 12 10:30 log.46676269._061190.job.log.1
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas       357 Oct 12 10:30 output.list
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:30 boinc_mmap_file
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas        29 Oct 12 10:30 wrapper_checkpoint.txt
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:30 runtime_log
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas   3829760 Oct 12 10:30 result.tar.gz
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 10:30 runtime_log.err
[2025-10-12 10:30:02] -rw-------. 1 boincer umatlas       663 Oct 12 10:30 RESLDmporR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAzgNDmvXnZGm.diag
[2025-10-12 10:30:02] -rw-r--r--. 1 boincer umatlas     21085 Oct 12 10:30 stderr.txt
[2025-10-12 10:30:22] HITS file was successfully produced:
[2025-10-12 10:30:22] -rw-------. 1 boincer umatlas 186664706 Oct 12 10:24 shared/HITS.pool.root.1
[2025-10-12 10:30:22]  *** Contents of shared directory: ***
[2025-10-12 10:30:22] total 401916
[2025-10-12 10:30:22] -rw-r--r--. 2 boincer umatlas 220466347 Oct 11 22:39 ATLAS.root_0
[2025-10-12 10:30:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:39 start_atlas.sh
[2025-10-12 10:30:22] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 22:39 input.tar.gz
[2025-10-12 10:30:22] -rw-------. 1 boincer umatlas 186664706 Oct 12 10:24 HITS.pool.root.1
[2025-10-12 10:30:22] -rw-------. 1 boincer umatlas   3829760 Oct 12 10:30 result.tar.gz
10:30:24 (3296862): run_atlas exited; CPU time 115539.441484
10:30:24 (3296862): called boinc_finish(0)

</stderr_txt>
]]>

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