Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:10:35 (23020): wrapper (7.7.26015): starting
21:10:35 (23020): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:10:35] Arguments: --nthreads 8
[2025-10-11 21:10:35] Threads: 8
[2025-10-11 21:10:35] Checking for CVMFS
[2025-10-11 21:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:10:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:10:36] 2.11.2.0 2934 111346 81860 151601 0 59 13942468 20275201 1 130560 1 49739414 99.986 3832597 21235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:10:36] CVMFS is ok
[2025-10-11 21:10:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:10:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:10:36] Further information can be found at the LHC@home message board.
[2025-10-11 21:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:10:36] Checking for apptainer binary...
[2025-10-11 21:10:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:10:36] Running /usr/bin/apptainer --version
[2025-10-11 21:10:36] apptainer version 1.3.2-1.el7
[2025-10-11 21:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:10:37] c-204-33.aglt2.org
[2025-10-11 21:10:37] apptainer works
[2025-10-11 21:10:37] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:10:37] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:10:37] Starting ATLAS job with PandaID=6838851956
[2025-10-11 21:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:22:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:22:13] 2025-10-12 03:21:17,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:22:13] 2025-10-12 03:21:17,408 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:22:13] 2025-10-12 03:21:17,408 | INFO     | sum of square deviations: 650252192.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,409 | INFO     | sum of deviations: 16212689068.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,409 | INFO     | mean x: 1760235359.5
[2025-10-11 23:22:13] 2025-10-12 03:21:17,409 | INFO     | mean y: 2480500.3125
[2025-10-11 23:22:13] 2025-10-12 03:21:17,409 | INFO     | -- intersect: -43885335521.18689
[2025-10-11 23:22:13] 2025-10-12 03:21:17,410 | INFO     | intersect: -43885335521.18689
[2025-10-11 23:22:13] 2025-10-12 03:21:17,410 | INFO     | chi2: 1.3911618462109294
[2025-10-11 23:22:13] 2025-10-12 03:21:17,410 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,411 | INFO     | sum of deviations: 15601695743.999992
[2025-10-11 23:22:13] 2025-10-12 03:21:17,411 | INFO     | mean x: 1760235207.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,411 | INFO     | mean y: 2479230.162601626
[2025-10-11 23:22:13] 2025-10-12 03:21:17,411 | INFO     | -- intersect: -47594287972.72875
[2025-10-11 23:22:13] 2025-10-12 03:21:17,411 | INFO     | intersect: -47594287972.72875
[2025-10-11 23:22:13] 2025-10-12 03:21:17,412 | INFO     | chi2: 1.392725334229944
[2025-10-11 23:22:13] 2025-10-12 03:21:17,412 | INFO     | current chi2=1.392725334229944 (change=-0.11238721240615854 %)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,412 | INFO     | right removable region: 122
[2025-10-11 23:22:13] 2025-10-12 03:21:17,412 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,413 | INFO     | sum of deviations: -2856273882.0000014
[2025-10-11 23:22:13] 2025-10-12 03:21:17,413 | INFO     | mean x: 1760235512.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,413 | INFO     | mean y: 2519542.6829268294
[2025-10-11 23:22:13] 2025-10-12 03:21:17,413 | INFO     | -- intersect: 8716279176.010027
[2025-10-11 23:22:13] 2025-10-12 03:21:17,413 | INFO     | intersect: 8716279176.010027
[2025-10-11 23:22:13] 2025-10-12 03:21:17,414 | INFO     | chi2: 0.009324784279391592
[2025-10-11 23:22:13] 2025-10-12 03:21:17,414 | INFO     | current chi2=0.009324784279391592 (change=99.32971247703571 %)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,414 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 23:22:13] 2025-10-12 03:21:17,415 | INFO     | sum of deviations: -3507170722.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,415 | INFO     | mean x: 1760235664.5
[2025-10-11 23:22:13] 2025-10-12 03:21:17,415 | INFO     | mean y: 2520993.7966101696
[2025-10-11 23:22:13] 2025-10-12 03:21:17,415 | INFO     | -- intersect: 12120619224.970264
[2025-10-11 23:22:13] 2025-10-12 03:21:17,415 | INFO     | intersect: 12120619224.970264
[2025-10-11 23:22:13] 2025-10-12 03:21:17,416 | INFO     | chi2: 0.006471922564761458
[2025-10-11 23:22:13] 2025-10-12 03:21:17,416 | INFO     | current chi2=0.006471922564761458 (change=30.594399067602595 %)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,416 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | sum of deviations: -3405778230.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | mean x: 1760235817.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | mean y: 2520739.3805309734
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | -- intersect: 13402603398.718012
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | intersect: 13402603398.718012
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | chi2: 0.006149195196802502
[2025-10-11 23:22:13] 2025-10-12 03:21:17,417 | INFO     | current chi2=0.006149195196802502 (change=4.986576472903937 %)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,418 | INFO     | left removable region: 30
[2025-10-11 23:22:13] 2025-10-12 03:21:17,418 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,418 | INFO     | sum of deviations: -2057868916.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,418 | INFO     | mean x: 1760236091.5
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | mean y: 2517297.0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | -- intersect: 15006205711.181938
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | intersect: 15006205711.181938
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | chi2: 0.005611326475983253
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | -- intersect: 15006205711.181938
[2025-10-11 23:22:13] 2025-10-12 03:21:17,419 | INFO     | current memory leak: -8.52 B/s (using 92 data points, chi2=0.01)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | could have reported an average CPU frequency of 1983 MHz (8 samples)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | ..............................
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | . Timing measurements:
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | . get job = 0 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | . initial setup = 2 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | . payload setup = 8 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,420 | INFO     | . stage-in = 0 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,421 | INFO     | . payload execution = 7782 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,421 | INFO     | . stage-out = 0 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,421 | INFO     | . log creation = 0 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,421 | INFO     | ..............................
[2025-10-11 23:22:13] 2025-10-12 03:21:17,519 | INFO     | 
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | job summary report
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | --------------------------------------------------
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | PanDA job id: 6838851956
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | task id: 46676269
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | errors: (none)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | pilot state: finished 
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | transexitcode: 0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | exeerrorcode: 0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | exeerrordiag: 
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | exitcode: 0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,521 | INFO     | exitmsg: OK
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | cpuconsumptiontime: 58185 s
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | nevents: 400
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | neventsw: 0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | pid: 731
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | pgrp: 731
[2025-10-11 23:22:13] 2025-10-12 03:21:17,522 | INFO     | corecount: 8
[2025-10-11 23:22:13] 2025-10-12 03:21:17,523 | INFO     | event service: False
[2025-10-11 23:22:13] 2025-10-12 03:21:17,523 | INFO     | sizes: {0: 2348629, 1: 2348884, 7: 2349146, 12: 2349174, 7795: 2376802, 7796: 2385800, 7798: 2385984, 7806: 2386178}
[2025-10-11 23:22:13] 2025-10-12 03:21:17,523 | INFO     | --------------------------------------------------
[2025-10-11 23:22:13] 2025-10-12 03:21:17,523 | INFO     | 
[2025-10-11 23:22:13] 2025-10-12 03:21:17,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:22:13] 2025-10-12 03:21:17,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:22:13] 2025-10-12 03:21:17,554 | INFO     | job 6838851956 has completed (purged errors)
[2025-10-11 23:22:13] 2025-10-12 03:21:17,555 | INFO     | overall cleanup function is called
[2025-10-11 23:22:13] 2025-10-12 03:21:18,563 | INFO     | --- collectZombieJob: --- 10, [731]
[2025-10-11 23:22:13] 2025-10-12 03:21:18,563 | INFO     | zombie collector waiting for pid 731
[2025-10-11 23:22:13] 2025-10-12 03:21:18,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:22:13] 2025-10-12 03:21:18,563 | INFO     | collected zombie processes
[2025-10-11 23:22:13] 2025-10-12 03:21:18,563 | INFO     | will attempt to kill all subprocesses of pid=731
[2025-10-11 23:22:13] 2025-10-12 03:21:18,655 | INFO     | process IDs to be killed: [731] (in reverse order)
[2025-10-11 23:22:13] 2025-10-12 03:21:18,711 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:22:13] 2025-10-12 03:21:18,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:22:13] 2025-10-12 03:21:18,715 | INFO     | did not find any defunct processes belonging to 731
[2025-10-11 23:22:13] 2025-10-12 03:21:18,718 | INFO     | did not find any defunct processes belonging to 731
[2025-10-11 23:22:13] 2025-10-12 03:21:18,719 | INFO     | ready for new job
[2025-10-11 23:22:13] 2025-10-12 03:21:18,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:22:13] 2025-10-12 03:21:18,720 | INFO     | ***************************************
[2025-10-11 23:22:13] 2025-10-12 03:21:18,720 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:22:13] 2025-10-12 03:21:18,721 | INFO     | ***************************************
[2025-10-11 23:22:13] 2025-10-12 03:21:18,721 | INFO     | 
[2025-10-11 23:22:13] 2025-10-12 03:21:18,721 | INFO     | architecture information:
[2025-10-11 23:22:13] 2025-10-12 03:21:18,722 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:22:13] 2025-10-12 03:21:18,740 | INFO     | cat /etc/os-release:
[2025-10-11 23:22:13] NAME="CentOS Linux"
[2025-10-11 23:22:13] VERSION="7 (Core)"
[2025-10-11 23:22:13] ID="centos"
[2025-10-11 23:22:13] ID_LIKE="rhel fedora"
[2025-10-11 23:22:13] VERSION_ID="7"
[2025-10-11 23:22:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:22:13] ANSI_COLOR="0;31"
[2025-10-11 23:22:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:22:13] HOME_URL="https://www.centos.org/"
[2025-10-11 23:22:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:22:13] 
[2025-10-11 23:22:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:22:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:22:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:22:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:22:13] 
[2025-10-11 23:22:13] 2025-10-12 03:21:18,741 | INFO     | ***************************************
[2025-10-11 23:22:13] 2025-10-12 03:21:19,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:22:13] 2025-10-12 03:21:19,261 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-10-11 23:22:13] 2025-10-12 03:21:19,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:22:13] 2025-10-12 03:21:19,263 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:22:13] 2025-10-12 03:21:19,263 | INFO     | update_server=False
[2025-10-11 23:22:13] 2025-10-12 03:21:19,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:22:13] 2025-10-12 03:21:19,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:22:13] 2025-10-12 03:21:19,321 | INFO     | all job control threads have been joined
[2025-10-11 23:22:13] 2025-10-12 03:21:19,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 23:22:13] 2025-10-12 03:21:19,438 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 23:22:13] 2025-10-12 03:21:19,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:22:13] 2025-10-12 03:21:19,438 | INFO     | will abort loop
[2025-10-11 23:22:13] 2025-10-12 03:21:20,257 | INFO     | all data control threads have been joined
[2025-10-11 23:22:13] 2025-10-12 03:21:20,269 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,270 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:22:13] 2025-10-12 03:21:20,327 | INFO     | [job] control thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,347 | INFO     | all payload control threads have been joined
[2025-10-11 23:22:13] 2025-10-12 03:21:20,419 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,443 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,578 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:20,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:22:13] 2025-10-12 03:21:21,095 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,162 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,166 | INFO     | [job] validate thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,262 | INFO     | [data] control thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,352 | INFO     | [payload] control thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:21,586 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:22,599 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:24,314 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:29,474 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:22:13] 2025-10-12 03:21:30,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:22:13] 2025-10-12 03:21:50,326 | INFO     | PID=26761 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:22:13] 2025-10-12 03:21:50,327 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:22:13] 2025-10-12 03:21:50,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:22:13] 2025-10-12 03:21:50,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:22:13] 2025-10-12 03:22:07,409 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:22:13] 2025-10-12 03:22:08,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372547123008)>', '<ExcThread(monitor, started 140371594041088)>']
[2025-10-11 23:22:13] 2025-10-12 03:22:08,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:22:13] 2025-10-12 03:22:08,419 | INFO     | [monitor] control thread has ended
[2025-10-11 23:22:13] 2025-10-12 03:22:13,079 | INFO     | all workflow threads have been joined
[2025-10-11 23:22:13] 2025-10-12 03:22:13,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:22:13] 2025-10-12 03:22:13,086 | INFO     | traces error code: 0
[2025-10-11 23:22:13] 2025-10-12 03:22:13,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:22:13] 2025-10-12 03:22:13,200 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:22:13] 2025-10-12 03:22:13,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:22:13] 2025-10-12 03:22:13,209 [wrapper] pilotpid: 26761
[2025-10-11 23:22:13] 2025-10-12 03:22:13,214 [wrapper] Pilot exit status: 0
[2025-10-11 23:22:13] 2025-10-12 03:22:13,230 [wrapper] pandaids: 6838851956
[2025-10-11 23:22:13] 2025-10-12 03:22:13,280 [wrapper] cleanup supervisor_pilot 24836 26762
[2025-10-11 23:22:13] 2025-10-12 03:22:13,285 [wrapper] Test setup, not cleaning
[2025-10-11 23:22:13] 2025-10-12 03:22:13,289 [wrapper] apfmon messages muted
[2025-10-11 23:22:13] 2025-10-12 03:22:13,294 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:22:13] 2025-10-12 03:22:13,299 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:22:13]  *** Error codes and diagnostics ***
[2025-10-11 23:22:13]     "exeErrorCode": 0,
[2025-10-11 23:22:13]     "exeErrorDiag": "",
[2025-10-11 23:22:13]     "pilotErrorCode": 0,
[2025-10-11 23:22:13]     "pilotErrorDiag": "",
[2025-10-11 23:22:13]  *** Listing of results directory ***
[2025-10-11 23:22:13] total 418296
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 15:56 queuedata.json
[2025-10-11 23:22:13] -rwx------ 1 boincer umatlas     36292 Oct 11 15:56 runpilot2-wrapper.sh
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas       100 Oct 11 21:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:22:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 21:10 run_atlas
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas       105 Oct 11 21:10 job.xml
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas 218845635 Oct 11 21:10 EVNT.46676267._002574.pool.root.1
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:10 start_atlas.sh
[2025-10-11 23:22:13] drwxrwx--x 2 boincer umatlas      4096 Oct 11 21:10 shared
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 21:10 input.tar.gz
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas         0 Oct 11 21:10 boinc_lockfile
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 21:10 pandaJob.out
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas    975496 Oct 11 21:10 agis_schedconf.cvmfs.json
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas   1560580 Oct 11 21:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:22:13] drwx------ 5 boincer umatlas      4096 Oct 11 21:10 pilot3
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:20 boinc_task_state.xml
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas 202635543 Oct 11 23:20 HITS.46676269._064051.pool.root.1
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 23:21 init_data.xml
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas      1050 Oct 11 23:21 memory_monitor_summary.json
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas    379119 Oct 11 23:21 log.46676269._064051.job.log.tgz.1
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas      7852 Oct 11 23:21 heartbeat.json
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas        95 Oct 11 23:21 pilot_heartbeat.json
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:21 wrapper_checkpoint.txt
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:21 boinc_mmap_file
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas      5004 Oct 11 23:22 pilotlog.txt
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas   1096453 Oct 11 23:22 log.46676269._064051.job.log.1
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas       357 Oct 11 23:22 output.list
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:22 runtime_log
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas   1495040 Oct 11 23:22 result.tar.gz
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:22 runtime_log.err
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas       660 Oct 11 23:22 DFhNDmrsuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUUSMDm5xmCOn.diag
[2025-10-11 23:22:13] -rw-r--r-- 1 boincer umatlas     20862 Oct 11 23:22 stderr.txt
[2025-10-11 23:22:13] HITS file was successfully produced:
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas 202635543 Oct 11 23:20 shared/HITS.pool.root.1
[2025-10-11 23:22:13]  *** Contents of shared directory: ***
[2025-10-11 23:22:13] total 413648
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas 218845635 Oct 11 21:10 ATLAS.root_0
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:10 start_atlas.sh
[2025-10-11 23:22:13] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 21:10 input.tar.gz
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas 202635543 Oct 11 23:20 HITS.pool.root.1
[2025-10-11 23:22:13] -rw------- 1 boincer umatlas   1495040 Oct 11 23:22 result.tar.gz
23:22:15 (23020): run_atlas exited; CPU time 58136.708411
23:22:15 (23020): called boinc_finish(0)

</stderr_txt>
]]>

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