Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:23:26 (1032366): wrapper (7.7.26015): starting
22:23:26 (1032366): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:23:27] Arguments: --nthreads 8
[2025-10-11 22:23:27] Threads: 8
[2025-10-11 22:23:27] Checking for CVMFS
[2025-10-11 22:23:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:23:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:23:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:23:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:23:30] 2.13.2.0 10966 62423 379996 151604 0 172 31902852 32935937 30182 16776704 4 109980726 99.526 134589628 8597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:23:30] CVMFS is ok
[2025-10-11 22:23:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:23:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:23:30] Further information can be found at the LHC@home message board.
[2025-10-11 22:23:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:23:30] Checking for apptainer binary...
[2025-10-11 22:23:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:23:30] Running /usr/bin/apptainer --version
[2025-10-11 22:23:30] apptainer version 1.4.3-1.el9
[2025-10-11 22:23:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:23:31] c6-12-25-3.aglt2.org
[2025-10-11 22:23:31] apptainer works
[2025-10-11 22:23:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:23:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:23:32] Starting ATLAS job with PandaID=6838851716
[2025-10-11 22:23:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:41:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:41:59] 2025-10-13 01:40:55,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:41:59] 2025-10-13 01:40:55,981 | INFO     | sum of deviations: 284203477600.33887
[2025-10-12 21:41:59] 2025-10-13 01:40:55,982 | INFO     | mean x: 1760277796.3520818
[2025-10-12 21:41:59] 2025-10-13 01:40:55,983 | INFO     | mean y: 2139298.337472608
[2025-10-12 21:41:59] 2025-10-13 01:40:55,983 | INFO     | -- intersect: -626692622.7615459
[2025-10-12 21:41:59] 2025-10-13 01:40:55,983 | INFO     | intersect: -626692622.7615459
[2025-10-12 21:41:59] 2025-10-13 01:40:56,008 | INFO     | chi2: 6.510181490570752
[2025-10-12 21:41:59] 2025-10-13 01:40:56,055 | INFO     | sum of square deviations: 786880482273.9674
[2025-10-12 21:41:59] 2025-10-13 01:40:56,795 | INFO     | sum of deviations: 511198157762.59247
[2025-10-12 21:41:59] 2025-10-13 01:40:56,817 | INFO     | mean x: 1760277643.8541055
[2025-10-12 21:41:59] 2025-10-13 01:40:56,818 | INFO     | mean y: 2143278.3848973606
[2025-10-12 21:41:59] 2025-10-13 01:40:56,818 | INFO     | -- intersect: -1141423894.724367
[2025-10-12 21:41:59] 2025-10-13 01:40:56,818 | INFO     | intersect: -1141423894.724367
[2025-10-12 21:41:59] 2025-10-13 01:40:56,843 | INFO     | chi2: 4.376535014550438
[2025-10-12 21:41:59] 2025-10-13 01:40:56,862 | INFO     | current chi2=4.376535014550438 (change=32.77399376823297 %)
[2025-10-12 21:41:59] 2025-10-13 01:40:56,932 | INFO     | sum of square deviations: 778258598921.048
[2025-10-12 21:41:59] 2025-10-13 01:40:58,522 | INFO     | sum of deviations: 541701791795.8396
[2025-10-12 21:41:59] 2025-10-13 01:40:58,591 | INFO     | mean x: 1760277491.3546727
[2025-10-12 21:41:59] 2025-10-13 01:40:58,591 | INFO     | mean y: 2143817.5688005886
[2025-10-12 21:41:59] 2025-10-13 01:40:58,592 | INFO     | -- intersect: -1223085781.4959264
[2025-10-12 21:41:59] 2025-10-13 01:40:58,592 | INFO     | intersect: -1223085781.4959264
[2025-10-12 21:41:59] 2025-10-13 01:40:58,597 | INFO     | chi2: 4.337640708986909
[2025-10-12 21:41:59] 2025-10-13 01:40:58,597 | INFO     | current chi2=4.337640708986909 (change=0.888700888584674 %)
[2025-10-12 21:41:59] 2025-10-13 01:40:58,597 | INFO     | right removable region: 1358
[2025-10-12 21:41:59] 2025-10-13 01:40:58,602 | INFO     | sum of square deviations: 786879853604.5511
[2025-10-12 21:41:59] 2025-10-13 01:40:58,668 | INFO     | monitor loop #2485: job 0:6838851716 is in state 'finished'
[2025-10-12 21:41:59] 2025-10-13 01:40:58,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:41:59] 2025-10-13 01:40:58,974 | INFO     | sum of deviations: -15170758453.744156
[2025-10-12 21:41:59] 2025-10-13 01:40:58,975 | INFO     | mean x: 1760277948.8555717
[2025-10-12 21:41:59] 2025-10-13 01:40:58,975 | INFO     | mean y: 2144551.986070381
[2025-10-12 21:41:59] 2025-10-13 01:40:58,975 | INFO     | -- intersect: 36082073.00813056
[2025-10-12 21:41:59] 2025-10-13 01:40:58,975 | INFO     | intersect: 36082073.00813056
[2025-10-12 21:41:59] 2025-10-13 01:40:58,980 | INFO     | chi2: 4.072826606494332
[2025-10-12 21:41:59] 2025-10-13 01:40:58,981 | INFO     | current chi2=4.072826606494332 (change=37.43912343467917 %)
[2025-10-12 21:41:59] 2025-10-13 01:40:58,985 | INFO     | sum of square deviations: 778257425151.0468
[2025-10-12 21:41:59] 2025-10-13 01:40:59,172 | INFO     | sum of deviations: -160819945132.15665
[2025-10-12 21:41:59] 2025-10-13 01:40:59,173 | INFO     | mean x: 1760278101.3598235
[2025-10-12 21:41:59] 2025-10-13 01:40:59,173 | INFO     | mean y: 2147126.5136129507
[2025-10-12 21:41:59] 2025-10-13 01:40:59,174 | INFO     | -- intersect: 365892872.49615985
[2025-10-12 21:41:59] 2025-10-13 01:40:59,181 | INFO     | intersect: 365892872.49615985
[2025-10-12 21:41:59] 2025-10-13 01:40:59,186 | INFO     | chi2: 3.4734294377478228
[2025-10-12 21:41:59] 2025-10-13 01:40:59,187 | INFO     | current chi2=3.4734294377478228 (change=14.716982249888558 %)
[2025-10-12 21:41:59] 2025-10-13 01:40:59,187 | INFO     | left removable region: 20
[2025-10-12 21:41:59] 2025-10-13 01:40:59,191 | INFO     | sum of square deviations: 742732577246.1111
[2025-10-12 21:41:59] 2025-10-13 01:40:59,505 | INFO     | sum of deviations: -51580715596.297966
[2025-10-12 21:41:59] 2025-10-13 01:40:59,506 | INFO     | mean x: 1760278070.8692079
[2025-10-12 21:41:59] 2025-10-13 01:40:59,506 | INFO     | mean y: 2154537.5582959643
[2025-10-12 21:41:59] 2025-10-13 01:40:59,506 | INFO     | -- intersect: 124400962.88752781
[2025-10-12 21:41:59] 2025-10-13 01:40:59,507 | INFO     | intersect: 124400962.88752781
[2025-10-12 21:41:59] 2025-10-13 01:40:59,512 | INFO     | chi2: 0.9693932459520671
[2025-10-12 21:41:59] 2025-10-13 01:40:59,513 | INFO     | -- intersect: 124400962.88752781
[2025-10-12 21:41:59] 2025-10-13 01:40:59,513 | INFO     | current memory leak: -0.07 B/s (using 1338 data points, chi2=0.97)
[2025-10-12 21:41:59] 2025-10-13 01:40:59,517 | INFO     | could have reported an average CPU frequency of 999 MHz (48 samples)
[2025-10-12 21:41:59] 2025-10-13 01:40:59,518 | INFO     | ..............................
[2025-10-12 21:41:59] 2025-10-13 01:40:59,518 | INFO     | . Timing measurements:
[2025-10-12 21:41:59] 2025-10-13 01:40:59,518 | INFO     | . get job = 0 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,519 | INFO     | . initial setup = 6 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,519 | INFO     | . payload setup = 48 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,519 | INFO     | . stage-in = 0 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,519 | INFO     | . payload execution = 83534 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,519 | INFO     | . stage-out = 19 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,520 | INFO     | . log creation = 2 s
[2025-10-12 21:41:59] 2025-10-13 01:40:59,532 | INFO     | ..............................
[2025-10-12 21:41:59] 2025-10-13 01:41:00,459 | INFO     | 
[2025-10-12 21:41:59] 2025-10-13 01:41:00,460 | INFO     | job summary report
[2025-10-12 21:41:59] 2025-10-13 01:41:00,460 | INFO     | --------------------------------------------------
[2025-10-12 21:41:59] 2025-10-13 01:41:00,460 | INFO     | PanDA job id: 6838851716
[2025-10-12 21:41:59] 2025-10-13 01:41:00,461 | INFO     | task id: 46676269
[2025-10-12 21:41:59] 2025-10-13 01:41:00,461 | INFO     | errors: (none)
[2025-10-12 21:41:59] 2025-10-13 01:41:00,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:41:59] 2025-10-13 01:41:00,461 | INFO     | pilot state: finished 
[2025-10-12 21:41:59] 2025-10-13 01:41:00,462 | INFO     | transexitcode: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:00,462 | INFO     | exeerrorcode: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:00,462 | INFO     | exeerrordiag: 
[2025-10-12 21:41:59] 2025-10-13 01:41:00,462 | INFO     | exitcode: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:00,462 | INFO     | exitmsg: OK
[2025-10-12 21:41:59] 2025-10-13 01:41:00,463 | INFO     | cpuconsumptiontime: 122697 s
[2025-10-12 21:41:59] 2025-10-13 01:41:00,467 | INFO     | nevents: 400
[2025-10-12 21:41:59] 2025-10-13 01:41:00,468 | INFO     | neventsw: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:00,468 | INFO     | pid: 1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:00,468 | INFO     | pgrp: 1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:00,468 | INFO     | corecount: 8
[2025-10-12 21:41:59] 2025-10-13 01:41:00,468 | INFO     | event service: False
[2025-10-12 21:41:59] 2025-10-13 01:41:00,469 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 4: 2348742, 5: 2348941, 6: 2348997, 7: 2349153, 19: 2349181, 30: 2349209, 42: 2349527, 53: 2349555, 83591: 2405062, 835
[2025-10-12 21:41:59] 2025-10-13 01:41:00,469 | INFO     | --------------------------------------------------
[2025-10-12 21:41:59] 2025-10-13 01:41:00,469 | INFO     | 
[2025-10-12 21:41:59] 2025-10-13 01:41:00,470 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 21:41:59] 2025-10-13 01:41:00,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:41:59] 2025-10-13 01:41:00,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:41:59] 2025-10-13 01:41:00,672 | INFO     | job 6838851716 has completed (purged errors)
[2025-10-12 21:41:59] 2025-10-13 01:41:00,672 | INFO     | overall cleanup function is called
[2025-10-12 21:41:59] 2025-10-13 01:41:01,803 | INFO     | --- collectZombieJob: --- 10, [1047069]
[2025-10-12 21:41:59] 2025-10-13 01:41:01,804 | INFO     | zombie collector waiting for pid 1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:01,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:41:59] 2025-10-13 01:41:01,804 | INFO     | collected zombie processes
[2025-10-12 21:41:59] 2025-10-13 01:41:01,804 | INFO     | will attempt to kill all subprocesses of pid=1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:07,923 | INFO     | PID=1037125 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 21:41:59] 2025-10-13 01:41:07,924 | INFO     | .. there are 31 such processes running
[2025-10-12 21:41:59] 2025-10-13 01:41:11,282 | INFO     | process IDs to be killed: [1047069] (in reverse order)
[2025-10-12 21:41:59] 2025-10-13 01:41:11,928 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:41:59] 2025-10-13 01:41:11,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:41:59] 2025-10-13 01:41:12,137 | INFO     | did not find any defunct processes belonging to 1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:12,226 | INFO     | did not find any defunct processes belonging to 1047069
[2025-10-12 21:41:59] 2025-10-13 01:41:12,227 | INFO     | ready for new job
[2025-10-12 21:41:59] 2025-10-13 01:41:12,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:41:59] 2025-10-13 01:41:12,251 | INFO     | ***************************************
[2025-10-12 21:41:59] 2025-10-13 01:41:12,251 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 21:41:59] 2025-10-13 01:41:12,251 | INFO     | ***************************************
[2025-10-12 21:41:59] 2025-10-13 01:41:12,252 | INFO     | 
[2025-10-12 21:41:59] 2025-10-13 01:41:12,296 | INFO     | architecture information:
[2025-10-12 21:41:59] 2025-10-13 01:41:12,305 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:41:59] 2025-10-13 01:41:12,413 | INFO     | cat /etc/os-release:
[2025-10-12 21:41:59] NAME="CentOS Linux"
[2025-10-12 21:41:59] VERSION="7 (Core)"
[2025-10-12 21:41:59] ID="centos"
[2025-10-12 21:41:59] ID_LIKE="rhel fedora"
[2025-10-12 21:41:59] VERSION_ID="7"
[2025-10-12 21:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:41:59] ANSI_COLOR="0;31"
[2025-10-12 21:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:41:59] HOME_URL="https://www.centos.org/"
[2025-10-12 21:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:41:59] 
[2025-10-12 21:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:41:59] 
[2025-10-12 21:41:59] 2025-10-13 01:41:12,414 | INFO     | ***************************************
[2025-10-12 21:41:59] 2025-10-13 01:41:12,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 21:41:59] 2025-10-13 01:41:13,136 | INFO     | sufficient remaining disk space (94425317376 B)
[2025-10-12 21:41:59] 2025-10-13 01:41:13,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:41:59] 2025-10-13 01:41:13,138 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:41:59] 2025-10-13 01:41:13,138 | INFO     | update_server=False
[2025-10-12 21:41:59] 2025-10-13 01:41:13,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:41:59] 2025-10-13 01:41:13,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:41:59] 2025-10-13 01:41:13,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:59] 2025-10-13 01:41:13,165 | INFO     | aborting loop
[2025-10-12 21:41:59] 2025-10-13 01:41:13,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:41:59] 2025-10-13 01:41:13,629 | INFO     | all data control threads have been joined
[2025-10-12 21:41:59] 2025-10-13 01:41:13,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:59] 2025-10-13 01:41:14,137 | INFO     | all job control threads have been joined
[2025-10-12 21:41:59] 2025-10-13 01:41:14,164 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,170 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,261 | INFO     | all payload control threads have been joined
[2025-10-12 21:41:59] 2025-10-13 01:41:14,376 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,398 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,400 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,439 | INFO     | [job] validate thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,635 | INFO     | [data] control thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,716 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:14,857 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:15,156 | INFO     | [job] control thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:15,165 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:15,268 | INFO     | [payload] control thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:15,416 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:15,460 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:17,456 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:41:59] 2025-10-13 01:41:43,611 | INFO     | PID=1037125 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:41:59] 2025-10-13 01:41:43,611 | INFO     | .. there are 31 such processes running
[2025-10-12 21:41:59] 2025-10-13 01:41:43,612 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:41:59] 2025-10-13 01:41:43,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:41:59] 2025-10-13 01:41:43,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:41:59] 2025-10-13 01:41:49,207 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:41:59] 2025-10-13 01:41:50,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712899987264)>', '<ExcThread(monitor, started 140712020522752)>']
[2025-10-12 21:41:59] 2025-10-13 01:41:50,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:41:59] 2025-10-13 01:41:50,662 | INFO     | [monitor] control thread has ended
[2025-10-12 21:41:59] 2025-10-13 01:41:55,106 | INFO     | all workflow threads have been joined
[2025-10-12 21:41:59] 2025-10-13 01:41:55,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:41:59] 2025-10-13 01:41:55,108 | INFO     | traces error code: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:55,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:41:59] 2025-10-13 01:41:56,926 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:41:59] 2025-10-13 01:41:57,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:41:59] 2025-10-13 01:41:57,034 [wrapper] pilotpid: 1037125
[2025-10-12 21:41:59] 2025-10-13 01:41:57,040 [wrapper] Pilot exit status: 0
[2025-10-12 21:41:59] 2025-10-13 01:41:57,120 [wrapper] pandaids: 6838851716
[2025-10-12 21:41:59] 2025-10-13 01:41:58,392 [wrapper] cleanup supervisor_pilot  207185 1037126
[2025-10-12 21:41:59] 2025-10-13 01:41:58,439 [wrapper] Test setup, not cleaning
[2025-10-12 21:41:59] 2025-10-13 01:41:58,458 [wrapper] apfmon messages muted
[2025-10-12 21:41:59] 2025-10-13 01:41:58,477 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:41:59] 2025-10-13 01:41:58,507 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:41:59]  *** Error codes and diagnostics ***
[2025-10-12 21:41:59]     "exeErrorCode": 0,
[2025-10-12 21:41:59]     "exeErrorDiag": "",
[2025-10-12 21:41:59]     "pilotErrorCode": 0,
[2025-10-12 21:41:59]     "pilotErrorDiag": "",
[2025-10-12 21:41:59]  *** Listing of results directory ***
[2025-10-12 21:41:59] total 428724
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:47 queuedata.json
[2025-10-12 21:41:59] -rwx------. 1 boincer umatlas     36292 Oct 11 15:48 runpilot2-wrapper.sh
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:41:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:23 run_atlas
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:23 job.xml
[2025-10-12 21:41:59] -rw-r--r--. 2 boincer umatlas 221265564 Oct 11 22:23 EVNT.46676267._002568.pool.root.1
[2025-10-12 21:41:59] -rw-r--r--. 2 boincer umatlas    576713 Oct 11 22:23 input.tar.gz
[2025-10-12 21:41:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:23 start_atlas.sh
[2025-10-12 21:41:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:23 shared
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:23 boinc_lockfile
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 22:23 pandaJob.out
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas    975496 Oct 11 22:24 agis_schedconf.cvmfs.json
[2025-10-12 21:41:59] drwx------. 4 boincer umatlas      4096 Oct 11 22:24 pilot3
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas 198633258 Oct 12 21:35 HITS.46676269._063889.pool.root.1
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas       532 Oct 12 21:35 boinc_task_state.xml
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 21:37 init_data.xml
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas      1052 Oct 12 21:39 memory_monitor_summary.json
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas   1061872 Oct 12 21:39 log.46676269._063889.job.log.tgz.1
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas      7861 Oct 12 21:40 heartbeat.json
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas        96 Oct 12 21:41 pilot_heartbeat.json
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas      4824 Oct 12 21:41 pilotlog.txt
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas   6538919 Oct 12 21:41 log.46676269._063889.job.log.1
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:41 boinc_mmap_file
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas        29 Oct 12 21:41 wrapper_checkpoint.txt
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas       357 Oct 12 21:41 output.list
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:41 runtime_log
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas   7618560 Oct 12 21:41 result.tar.gz
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas       666 Oct 12 21:41 VtSKDmhkuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2RhNDmQ4oFbm.diag
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 21:41 runtime_log.err
[2025-10-12 21:41:59] -rw-r--r--. 1 boincer umatlas     21260 Oct 12 21:41 stderr.txt
[2025-10-12 21:41:59] HITS file was successfully produced:
[2025-10-12 21:41:59] -rw-------. 1 boincer umatlas 198633258 Oct 12 21:35 shared/HITS.pool.root.1
[2025-10-12 21:42:20]  *** Contents of shared directory: ***
[2025-10-12 21:42:20] total 418088
[2025-10-12 21:42:20] -rw-r--r--. 2 boincer umatlas 221265564 Oct 11 22:23 ATLAS.root_0
[2025-10-12 21:42:20] -rw-r--r--. 2 boincer umatlas    576713 Oct 11 22:23 input.tar.gz
[2025-10-12 21:42:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:23 start_atlas.sh
[2025-10-12 21:42:20] -rw-------. 1 boincer umatlas 198633258 Oct 12 21:35 HITS.pool.root.1
[2025-10-12 21:42:20] -rw-------. 1 boincer umatlas   7618560 Oct 12 21:41 result.tar.gz
21:42:22 (1032366): run_atlas exited; CPU time 129223.290846
21:42:22 (1032366): called boinc_finish(0)

</stderr_txt>
]]>

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