Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:00 (2905215): wrapper (7.7.26015): starting
10:01:00 (2905215): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:01:00] Arguments: --nthreads 8
[2025-10-12 10:01:00] Threads: 8
[2025-10-12 10:01:00] Checking for CVMFS
[2025-10-12 10:01:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:01:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:01:00] 2.13.2.0 1338992 4162 58348 151612 2 57 3080176 4097025 0 130560 0 4297607 99.993 141408 26615 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 10:01:00] CVMFS is ok
[2025-10-12 10:01:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:01:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:01:00] Further information can be found at the LHC@home message board.
[2025-10-12 10:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:01:00] Checking for apptainer binary...
[2025-10-12 10:01:00] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 10:01:00] apptainer is not installed, using version from CVMFS
[2025-10-12 10:01:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:01:01] pckeatlas02
[2025-10-12 10:01:01] apptainer works
[2025-10-12 10:01:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:01:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:01:01] Starting ATLAS job with PandaID=6838851758
[2025-10-12 10:01:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:21:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:21:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-10-12 11:21:36]  is_altstaged=None
[2025-10-12 11:21:36]  is_tar=False
[2025-10-12 11:21:36]  lfn=log.46676269._063931.job.log.tgz.1
[2025-10-12 11:21:36]  mtime=0
[2025-10-12 11:21:36]  protocol_id=None
[2025-10-12 11:21:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 11:21:36]  replicas=None
[2025-10-12 11:21:36]  scope=mc23_13p6TeV
[2025-10-12 11:21:36]  status=None
[2025-10-12 11:21:36]  status_code=0
[2025-10-12 11:21:36]  storage_token=
[2025-10-12 11:21:36]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6838851758/log.46676269._063931.job.log.tgz.1
[2025-10-12 11:21:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d5/log.46676269._063931.job.log.tgz.1
[2025-10-12 11:21:36]  workdir=None
[2025-10-12 11:21:36] ]
[2025-10-12 11:21:36] 2025-10-12 09:21:01,089 | INFO     | transferring file log.46676269._063931.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6838851758/log.46676269._063931.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 11:21:36] 2025-10-12 09:21:01,089 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6838851758/log.46676269._063931.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._063931.j
[2025-10-12 11:21:36] 2025-10-12 09:21:01,097 | INFO     | adding to output.list: log.46676269._063931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d5/log.46676269._063931.job.log.tg
[2025-10-12 11:21:36] 2025-10-12 09:21:01,097 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:21:36] 2025-10-12 09:21:01,097 | INFO     | summary of transferred files:
[2025-10-12 11:21:36] 2025-10-12 09:21:01,098 | INFO     |  -- lfn=log.46676269._063931.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:21:36] 2025-10-12 09:21:01,098 | INFO     | stage-out finished correctly
[2025-10-12 11:21:36] 2025-10-12 09:21:02,045 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | job 6838851758 has state=finished
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | preparing for final server update for job 6838851758 in state='finished'
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | job 6838851758 has finished - writing final server update
[2025-10-12 11:21:36] 2025-10-12 09:21:02,080 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:21:36] 2025-10-12 09:21:02,081 | INFO     | executing command: lscpu
[2025-10-12 11:21:36] 2025-10-12 09:21:02,089 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:21:36] 2025-10-12 09:21:02,889 | INFO     | monitor loop #366: job 0:6838851758 is in state 'finished'
[2025-10-12 11:21:36] 2025-10-12 09:21:02,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:21:36] 2025-10-12 09:21:03,075 | INFO     | time since job start (4798s) is within the limit (172800.0s)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,790 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:21:36] 2025-10-12 09:21:04,791 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3909.002
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6838851758/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | INFO     | extracted standard info from prmon json
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:21:36] 2025-10-12 09:21:04,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | sum of deviations: -6350645889.000001
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | mean x: 1760258553.5
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | mean y: 2632811.111111111
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | -- intersect: 96608217047.27269
[2025-10-12 11:21:36] 2025-10-12 09:21:04,793 | INFO     | intersect: 96608217047.27269
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | chi2: 0.12770582055144744
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | -- intersect: 96608217047.27269
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | current memory leak: -54.88 B/s (using 72 data points, chi2=0.13)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | could have reported an average CPU frequency of 3757 MHz (6 samples)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | ..............................
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . Timing measurements:
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . get job = 0 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . initial setup = 0 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . payload setup = 3 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . stage-in = 0 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . payload execution = 4776 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . stage-out = 0 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | . log creation = 0 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,794 | INFO     | ..............................
[2025-10-12 11:21:36] 2025-10-12 09:21:04,832 | INFO     | 
[2025-10-12 11:21:36] 2025-10-12 09:21:04,832 | INFO     | job summary report
[2025-10-12 11:21:36] 2025-10-12 09:21:04,832 | INFO     | --------------------------------------------------
[2025-10-12 11:21:36] 2025-10-12 09:21:04,832 | INFO     | PanDA job id: 6838851758
[2025-10-12 11:21:36] 2025-10-12 09:21:04,832 | INFO     | task id: 46676269
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | errors: (none)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | pilot state: finished 
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | transexitcode: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | exeerrorcode: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | exeerrordiag: 
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | exitcode: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | exitmsg: OK
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | cpuconsumptiontime: 35777 s
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | nevents: 400
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | neventsw: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | pid: 2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | pgrp: 2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | corecount: 8
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | event service: False
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | sizes: {0: 2348801, 2: 2349063, 10: 2349091, 4783: 2375402, 4784: 2384402, 4785: 2384458, 4787: 2384780}
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | --------------------------------------------------
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | 
[2025-10-12 11:21:36] 2025-10-12 09:21:04,833 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 11:21:36] 2025-10-12 09:21:04,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | job 6838851758 has completed (purged errors)
[2025-10-12 11:21:36] 2025-10-12 09:21:04,843 | INFO     | overall cleanup function is called
[2025-10-12 11:21:36] 2025-10-12 09:21:05,849 | INFO     | --- collectZombieJob: --- 10, [2916280]
[2025-10-12 11:21:36] 2025-10-12 09:21:05,849 | INFO     | zombie collector waiting for pid 2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:05,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:21:36] 2025-10-12 09:21:05,850 | INFO     | collected zombie processes
[2025-10-12 11:21:36] 2025-10-12 09:21:05,850 | INFO     | will attempt to kill all subprocesses of pid=2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:05,881 | INFO     | process IDs to be killed: [2916280] (in reverse order)
[2025-10-12 11:21:36] 2025-10-12 09:21:05,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:21:36] 2025-10-12 09:21:05,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:21:36] 2025-10-12 09:21:05,898 | INFO     | did not find any defunct processes belonging to 2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:05,899 | INFO     | did not find any defunct processes belonging to 2916280
[2025-10-12 11:21:36] 2025-10-12 09:21:05,899 | INFO     | ready for new job
[2025-10-12 11:21:36] 2025-10-12 09:21:05,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:21:36] 2025-10-12 09:21:05,899 | INFO     | ***************************************
[2025-10-12 11:21:36] 2025-10-12 09:21:05,900 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:21:36] 2025-10-12 09:21:05,900 | INFO     | ***************************************
[2025-10-12 11:21:36] 2025-10-12 09:21:05,900 | INFO     | 
[2025-10-12 11:21:36] 2025-10-12 09:21:05,900 | INFO     | architecture information:
[2025-10-12 11:21:36] 2025-10-12 09:21:05,900 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:21:36] 2025-10-12 09:21:05,905 | INFO     | cat /etc/os-release:
[2025-10-12 11:21:36] NAME="CentOS Linux"
[2025-10-12 11:21:36] VERSION="7 (Core)"
[2025-10-12 11:21:36] ID="centos"
[2025-10-12 11:21:36] ID_LIKE="rhel fedora"
[2025-10-12 11:21:36] VERSION_ID="7"
[2025-10-12 11:21:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:21:36] ANSI_COLOR="0;31"
[2025-10-12 11:21:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:21:36] HOME_URL="https://www.centos.org/"
[2025-10-12 11:21:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:21:36] 
[2025-10-12 11:21:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:21:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:21:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:21:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:21:36] 
[2025-10-12 11:21:36] 2025-10-12 09:21:05,905 | INFO     | ***************************************
[2025-10-12 11:21:36] 2025-10-12 09:21:06,408 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | INFO     | sufficient remaining disk space (118343335936 B)
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | INFO     | update_server=False
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:21:36] 2025-10-12 09:21:06,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:21:36] 2025-10-12 09:21:06,416 | INFO     | aborting loop
[2025-10-12 11:21:36] 2025-10-12 09:21:06,424 | INFO     | all payload control threads have been joined
[2025-10-12 11:21:36] 2025-10-12 09:21:06,569 | INFO     | all data control threads have been joined
[2025-10-12 11:21:36] 2025-10-12 09:21:06,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:21:36] 2025-10-12 09:21:07,420 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,421 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,421 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,429 | INFO     | [payload] control thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,575 | INFO     | [data] control thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,743 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:07,866 | INFO     | all job control threads have been joined
[2025-10-12 11:21:36] 2025-10-12 09:21:08,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:21:36] 2025-10-12 09:21:08,180 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,326 | INFO     | [job] validate thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,355 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,440 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,537 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,648 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,872 | INFO     | [job] control thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:08,922 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:12,091 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:12,383 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:21:36] 2025-10-12 09:21:16,807 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:21:36] 2025-10-12 09:21:17,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:21:36] 2025-10-12 09:21:18,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388569769792)>', '<ExcThread(monitor, started 140388002141952)>']
[2025-10-12 11:21:36] 2025-10-12 09:21:23,914 | INFO     | all workflow threads have been joined
[2025-10-12 11:21:36] 2025-10-12 09:21:23,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:21:36] 2025-10-12 09:21:23,915 | INFO     | traces error code: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:23,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:21:36] 2025-10-12 09:21:36,207 | INFO     | PID=2908982 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:21:36] 2025-10-12 09:21:36,208 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:21:36] 2025-10-12 09:21:36,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:21:36] 2025-10-12 09:21:36,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:21:36] 2025-10-12 09:21:36,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:21:36] 2025-10-12 09:21:36,208 | INFO     | [monitor] control thread has ended
[2025-10-12 11:21:36] 2025-10-12 09:21:36,266 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:21:36] 2025-10-12 09:21:36,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:21:36] 2025-10-12 09:21:36,268 [wrapper] pilotpid: 2908982
[2025-10-12 11:21:36] 2025-10-12 09:21:36,269 [wrapper] Pilot exit status: 0
[2025-10-12 11:21:36] 2025-10-12 09:21:36,273 [wrapper] pandaids: 6838851758
[2025-10-12 11:21:36] 2025-10-12 09:21:36,282 [wrapper] cleanup supervisor_pilot 2932022 2908983
[2025-10-12 11:21:36] 2025-10-12 09:21:36,283 [wrapper] Test setup, not cleaning
[2025-10-12 11:21:36] 2025-10-12 09:21:36,284 [wrapper] apfmon messages muted
[2025-10-12 11:21:36] 2025-10-12 09:21:36,285 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:21:36] 2025-10-12 09:21:36,286 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:21:36]  *** Error codes and diagnostics ***
[2025-10-12 11:21:36]     "exeErrorCode": 0,
[2025-10-12 11:21:36]     "exeErrorDiag": "",
[2025-10-12 11:21:36]     "pilotErrorCode": 0,
[2025-10-12 11:21:36]     "pilotErrorDiag": "",
[2025-10-12 11:21:36]  *** Listing of results directory ***
[2025-10-12 11:21:36] total 412260
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc    557409 Oct 11 21:43 pilot3.tar.gz
[2025-10-12 11:21:36] -rwx------. 1 boinc boinc     36292 Oct 11 21:48 runpilot2-wrapper.sh
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc      5112 Oct 11 21:48 queuedata.json
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc       100 Oct 12 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:21:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 10:01 run_atlas
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc       105 Oct 12 10:01 job.xml
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc      6275 Oct 12 10:01 init_data.xml
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc 219432183 Oct 12 10:01 EVNT.46676267._002570.pool.root.1
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:01 start_atlas.sh
[2025-10-12 11:21:36] drwxrwx--x. 2 boinc boinc        68 Oct 12 10:01 shared
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc    569676 Oct 12 10:01 input.tar.gz
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc         0 Oct 12 10:01 boinc_lockfile
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc      2546 Oct 12 10:01 pandaJob.out
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc    975520 Oct 12 10:01 agis_schedconf.cvmfs.json
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc   1560580 Oct 12 10:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:21:36] drwx------. 5 boinc boinc      4096 Oct 12 10:01 pilot3
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc 196798560 Oct 12 11:20 HITS.46676269._063931.pool.root.1
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc      1026 Oct 12 11:20 memory_monitor_summary.json
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc    310137 Oct 12 11:21 log.46676269._063931.job.log.tgz.1
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc       529 Oct 12 11:21 boinc_task_state.xml
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc      7762 Oct 12 11:21 heartbeat.json
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc      8192 Oct 12 11:21 boinc_mmap_file
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc        27 Oct 12 11:21 wrapper_checkpoint.txt
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc       747 Oct 12 11:21 pilotlog.txt
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc        95 Oct 12 11:21 pilot_heartbeat.json
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc    704520 Oct 12 11:21 log.46676269._063931.job.log.1
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc       357 Oct 12 11:21 output.list
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc       620 Oct 12 11:21 runtime_log
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc   1034240 Oct 12 11:21 result.tar.gz
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc      8730 Oct 12 11:21 runtime_log.err
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc       650 Oct 12 11:21 QHXLDmNluR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUShNDm5KMGTo.diag
[2025-10-12 11:21:36] -rw-r--r--. 1 boinc boinc     21489 Oct 12 11:21 stderr.txt
[2025-10-12 11:21:36] HITS file was successfully produced:
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc 196798560 Oct 12 11:20 shared/HITS.pool.root.1
[2025-10-12 11:21:36]  *** Contents of shared directory: ***
[2025-10-12 11:21:36] total 408068
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc 219432183 Oct 12 10:01 ATLAS.root_0
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:01 start_atlas.sh
[2025-10-12 11:21:36] -rw-r--r--. 2 boinc boinc    569676 Oct 12 10:01 input.tar.gz
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc 196798560 Oct 12 11:20 HITS.pool.root.1
[2025-10-12 11:21:36] -rw-------. 1 boinc boinc   1034240 Oct 12 11:21 result.tar.gz
11:21:37 (2905215): run_atlas exited; CPU time 35816.819736
11:21:37 (2905215): called boinc_finish(0)

</stderr_txt>
]]>

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