Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:43:47 (2220058): wrapper (7.7.26015): starting
10:43:47 (2220058): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 10:43:47] Arguments: --nthreads 2
[2025-10-12 10:43:47] Threads: 2
[2025-10-12 10:43:47] Checking for CVMFS
[2025-10-12 10:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:43:48] 2.9.2.0 1554424 2695 57964 151613 3 57 29932520 36864001 0 130560 0 1606293 99.989 90560 723 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 10:43:48] CVMFS is ok
[2025-10-12 10:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:43:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:43:48] Further information can be found at the LHC@home message board.
[2025-10-12 10:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:43:48] Checking for apptainer binary...
[2025-10-12 10:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:43:48] Running /usr/bin/apptainer --version
[2025-10-12 10:43:48] apptainer version 1.4.1-1.1
[2025-10-12 10:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:43:48] thA310
[2025-10-12 10:43:48] apptainer works
[2025-10-12 10:43:48] Set ATHENA_PROC_NUMBER=2
[2025-10-12 10:43:48] Set ATHENA_CORE_NUMBER=2
[2025-10-12 10:43:48] Starting ATLAS job with PandaID=6838851661
[2025-10-12 10:43:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:51:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:51:19] 2025-10-12 10:50:37,071 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:37,123 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:37,161 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:37,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:51:19] 2025-10-12 10:50:37,391 | INFO     | [data] control thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:37,407 | INFO     | [job] control thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:37,489 | INFO     | all payload control threads have been joined
[2025-10-12 12:51:19] 2025-10-12 10:50:37,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:51:19] 2025-10-12 10:50:37,785 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:38,168 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:38,206 | INFO     | [job] validate thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:38,420 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:38,495 | INFO     | [payload] control thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:38,499 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:39,269 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:41,677 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:50:46,516 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:51:19] 2025-10-12 10:50:47,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:51:19] 2025-10-12 10:51:06,571 | INFO     | PID=2223765 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:51:19] 2025-10-12 10:51:06,571 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:51:19] 2025-10-12 10:51:06,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:51:19] 2025-10-12 10:51:06,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:51:19] 2025-10-12 10:51:12,435 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:51:19] 2025-10-12 10:51:14,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554759931712)>', '<ExcThread(monitor, started 140554146936576)>']
[2025-10-12 12:51:19] 2025-10-12 10:51:14,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:51:19] 2025-10-12 10:51:14,613 | INFO     | [monitor] control thread has ended
[2025-10-12 12:51:19] 2025-10-12 10:51:19,120 | INFO     | all workflow threads have been joined
[2025-10-12 12:51:19] 2025-10-12 10:51:19,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:51:19] 2025-10-12 10:51:19,121 | INFO     | traces error code: 0
[2025-10-12 12:51:19] 2025-10-12 10:51:19,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:51:19] 2025-10-12 10:51:19,164 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:51:19] 2025-10-12 10:51:19,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:51:19] 2025-10-12 10:51:19,170 [wrapper] pilotpid: 2223765
[2025-10-12 12:51:19] 2025-10-12 10:51:19,172 [wrapper] Pilot exit status: 0
[2025-10-12 12:51:19] 2025-10-12 10:51:19,177 [wrapper] pandaids: 6838851661
[2025-10-12 12:51:19] 2025-10-12 10:51:19,191 [wrapper] cleanup supervisor_pilot 2244834 2223766
[2025-10-12 12:51:19] 2025-10-12 10:51:19,193 [wrapper] Test setup, not cleaning
[2025-10-12 12:51:19] 2025-10-12 10:51:19,195 [wrapper] apfmon messages muted
[2025-10-12 12:51:19] 2025-10-12 10:51:19,197 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:51:19] 2025-10-12 10:51:19,199 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:51:19]  *** Error codes and diagnostics ***
[2025-10-12 12:51:19]     "exeErrorCode": 0,
[2025-10-12 12:51:19]     "exeErrorDiag": "",
[2025-10-12 12:51:19]     "pilotErrorCode": 0,
[2025-10-12 12:51:19]     "pilotErrorDiag": "",
[2025-10-12 12:51:19]  *** Listing of results directory ***
[2025-10-12 12:51:19] total 408616
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      5112 Oct 11 21:43 queuedata.json
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc    557409 Oct 11 21:43 pilot3.tar.gz
[2025-10-12 12:51:19] -rwx------ 1 boinc boinc     36292 Oct 11 21:45 runpilot2-wrapper.sh
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:51:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:43 run_atlas
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:43 job.xml
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc 219645620 Oct 12 10:43 EVNT.46676267._002565.pool.root.1
[2025-10-12 12:51:19] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:43 shared
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:43 input.tar.gz
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:43 start_atlas.sh
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:43 boinc_setup_complete
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      6206 Oct 12 10:43 init_data.xml
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:43 boinc_lockfile
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:43 pandaJob.out
[2025-10-12 12:51:19] -rw------- 1 boinc boinc    975520 Oct 12 10:44 agis_schedconf.cvmfs.json
[2025-10-12 12:51:19] -rw------- 1 boinc boinc   1560580 Oct 12 10:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:51:19] drwx------ 5 boinc boinc      4096 Oct 12 10:44 pilot3
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc       529 Oct 12 12:50 boinc_task_state.xml
[2025-10-12 12:51:19] -rw------- 1 boinc boinc 192158457 Oct 12 12:50 HITS.46676269._063834.pool.root.1
[2025-10-12 12:51:19] -rw------- 1 boinc boinc      1017 Oct 12 12:50 memory_monitor_summary.json
[2025-10-12 12:51:19] -rw------- 1 boinc boinc    266628 Oct 12 12:50 log.46676269._063834.job.log.tgz.1
[2025-10-12 12:51:19] -rw------- 1 boinc boinc      7755 Oct 12 12:50 heartbeat.json
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:51 wrapper_checkpoint.txt
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:51 boinc_mmap_file
[2025-10-12 12:51:19] -rw------- 1 boinc boinc        95 Oct 12 12:51 pilot_heartbeat.json
[2025-10-12 12:51:19] -rw------- 1 boinc boinc      5010 Oct 12 12:51 pilotlog.txt
[2025-10-12 12:51:19] -rw------- 1 boinc boinc   1093662 Oct 12 12:51 log.46676269._063834.job.log.1
[2025-10-12 12:51:19] -rw------- 1 boinc boinc       357 Oct 12 12:51 output.list
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:51 runtime_log
[2025-10-12 12:51:19] -rw------- 1 boinc boinc   1382400 Oct 12 12:51 result.tar.gz
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      8777 Oct 12 12:51 runtime_log.err
[2025-10-12 12:51:19] -rw------- 1 boinc boinc       659 Oct 12 12:51 C1LODmRiuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7QhNDmfQmIHn.diag
[2025-10-12 12:51:19] -rw-r--r-- 1 boinc boinc      6564 Oct 12 12:51 stderr.txt
[2025-10-12 12:51:19] HITS file was successfully produced:
[2025-10-12 12:51:19] -rw------- 1 boinc boinc 192158457 Oct 12 12:50 shared/HITS.pool.root.1
[2025-10-12 12:51:19]  *** Contents of shared directory: ***
[2025-10-12 12:51:19] total 404092
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc 219645620 Oct 12 10:43 ATLAS.root_0
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:43 input.tar.gz
[2025-10-12 12:51:19] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:43 start_atlas.sh
[2025-10-12 12:51:19] -rw------- 1 boinc boinc 192158457 Oct 12 12:50 HITS.pool.root.1
[2025-10-12 12:51:19] -rw------- 1 boinc boinc   1382400 Oct 12 12:51 result.tar.gz
12:51:21 (2220058): run_atlas exited; CPU time 14794.715100
12:51:21 (2220058): called boinc_finish(0)

</stderr_txt>
]]>

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