Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:55:56 (30024): wrapper (7.7.26015): starting
20:55:56 (30024): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 20:55:56] Arguments: --nthreads 8
[2025-10-11 20:55:56] Threads: 8
[2025-10-11 20:55:56] Checking for CVMFS
[2025-10-11 20:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:55:57] 2.11.2.0 2923 205152 77932 151601 2 59 14785972 20275201 1 130560 3 72918532 99.976 10712079 9980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 20:55:57] CVMFS is ok
[2025-10-11 20:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:55:57] Further information can be found at the LHC@home message board.
[2025-10-11 20:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:55:57] Checking for apptainer binary...
[2025-10-11 20:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:55:57] Running /usr/bin/apptainer --version
[2025-10-11 20:55:57] apptainer version 1.3.2-1.el7
[2025-10-11 20:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:55:59] c-204-28.aglt2.org
[2025-10-11 20:55:59] apptainer works
[2025-10-11 20:55:59] Set ATHENA_PROC_NUMBER=8
[2025-10-11 20:55:59] Set ATHENA_CORE_NUMBER=8
[2025-10-11 20:55:59] Starting ATLAS job with PandaID=6838634039
[2025-10-11 20:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:04:35]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:04:35] 2025-10-12 03:03:26,986 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:04:35] 2025-10-12 03:03:26,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:04:35] 2025-10-12 03:03:26,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:04:35] 2025-10-12 03:03:26,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:04:35] 2025-10-12 03:03:26,990 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:04:35] 2025-10-12 03:03:26,990 | INFO     | sum of square deviations: 605592750.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,991 | INFO     | sum of deviations: 4657193169.000003
[2025-10-11 23:04:35] 2025-10-12 03:03:26,991 | INFO     | mean x: 1760234390.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,991 | INFO     | mean y: 2459268.096
[2025-10-11 23:04:35] 2025-10-12 03:03:26,991 | INFO     | -- intersect: -13534280689.485868
[2025-10-11 23:04:35] 2025-10-12 03:03:26,991 | INFO     | intersect: -13534280689.485868
[2025-10-11 23:04:35] 2025-10-12 03:03:26,992 | INFO     | chi2: 2.3431485291185505
[2025-10-11 23:04:35] 2025-10-12 03:03:26,992 | INFO     | sum of square deviations: 535786790.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | sum of deviations: 12433336986.500002
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | mean x: 1760234237.5
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | mean y: 2475672.2583333333
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | -- intersect: -40845088803.92515
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | intersect: -40845088803.92515
[2025-10-11 23:04:35] 2025-10-12 03:03:26,993 | INFO     | chi2: 1.5783149159673813
[2025-10-11 23:04:35] 2025-10-12 03:03:26,994 | INFO     | current chi2=1.5783149159673813 (change=32.641277479703156 %)
[2025-10-11 23:04:35] 2025-10-12 03:03:26,994 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,994 | INFO     | sum of deviations: 11826133562.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,995 | INFO     | mean x: 1760234085.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,995 | INFO     | mean y: 2474230.408695652
[2025-10-11 23:04:35] 2025-10-12 03:03:26,995 | INFO     | -- intersect: -44141771535.77636
[2025-10-11 23:04:35] 2025-10-12 03:03:26,995 | INFO     | intersect: -44141771535.77636
[2025-10-11 23:04:35] 2025-10-12 03:03:26,995 | INFO     | chi2: 1.581247769833198
[2025-10-11 23:04:35] 2025-10-12 03:03:26,996 | INFO     | current chi2=1.581247769833198 (change=-0.18582184303941954 %)
[2025-10-11 23:04:35] 2025-10-12 03:03:26,996 | INFO     | right removable region: 114
[2025-10-11 23:04:35] 2025-10-12 03:03:26,996 | INFO     | sum of square deviations: 535786790.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | sum of deviations: -14037785064.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | mean x: 1760234542.5
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | mean y: 2499372.933333333
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | -- intersect: 46121206722.629974
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | intersect: 46121206722.629974
[2025-10-11 23:04:35] 2025-10-12 03:03:26,997 | INFO     | chi2: 0.8871508312233144
[2025-10-11 23:04:35] 2025-10-12 03:03:26,998 | INFO     | current chi2=0.8871508312233144 (change=62.13851489999039 %)
[2025-10-11 23:04:35] 2025-10-12 03:03:26,998 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | sum of deviations: -13431879384.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | mean x: 1760234695.0
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | mean y: 2497807.1826086957
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | -- intersect: 50140642028.27005
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | intersect: 50140642028.27005
[2025-10-11 23:04:35] 2025-10-12 03:03:26,999 | INFO     | chi2: 0.8725490840296709
[2025-10-11 23:04:35] 2025-10-12 03:03:27,000 | INFO     | current chi2=0.8725490840296709 (change=1.6459148410545674 %)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,000 | INFO     | left removable region: 20
[2025-10-11 23:04:35] 2025-10-12 03:03:27,000 | INFO     | sum of square deviations: 257521107.5
[2025-10-11 23:04:35] 2025-10-12 03:03:27,000 | INFO     | sum of deviations: 732709765.5
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | mean x: 1760234664.5
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | mean y: 2497774.989361702
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | -- intersect: -5005795101.549957
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | intersect: -5005795101.549957
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | chi2: 9.293495117014003e-05
[2025-10-11 23:04:35] 2025-10-12 03:03:27,001 | INFO     | -- intersect: -5005795101.549957
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | current memory leak: 2.85 B/s (using 94 data points, chi2=0.00)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | could have reported an average CPU frequency of 1997 MHz (8 samples)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | ..............................
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | . Timing measurements:
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | . get job = 0 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,002 | INFO     | . initial setup = 2 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | . payload setup = 8 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | . stage-in = 0 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | . payload execution = 7591 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | . stage-out = 0 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | . log creation = 0 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,003 | INFO     | ..............................
[2025-10-11 23:04:35] 2025-10-12 03:03:27,096 | INFO     | 
[2025-10-11 23:04:35] 2025-10-12 03:03:27,097 | INFO     | job summary report
[2025-10-11 23:04:35] 2025-10-12 03:03:27,097 | INFO     | --------------------------------------------------
[2025-10-11 23:04:35] 2025-10-12 03:03:27,097 | INFO     | PanDA job id: 6838634039
[2025-10-11 23:04:35] 2025-10-12 03:03:27,097 | INFO     | task id: 46676269
[2025-10-11 23:04:35] 2025-10-12 03:03:27,097 | INFO     | errors: (none)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | pilot state: finished 
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | transexitcode: 0
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | exeerrorcode: 0
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | exeerrordiag: 
[2025-10-11 23:04:35] 2025-10-12 03:03:27,098 | INFO     | exitcode: 0
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | exitmsg: OK
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | cpuconsumptiontime: 55660 s
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | nevents: 400
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | neventsw: 0
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | pid: 7868
[2025-10-11 23:04:35] 2025-10-12 03:03:27,099 | INFO     | pgrp: 7868
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | corecount: 8
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | event service: False
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 7603: 2376749, 7604: 2376748, 7606: 2385930, 7607: 2385986, 7613: 2386180}
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | --------------------------------------------------
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | 
[2025-10-11 23:04:35] 2025-10-12 03:03:27,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:04:35] 2025-10-12 03:03:27,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:04:35] 2025-10-12 03:03:27,135 | INFO     | job 6838634039 has completed (purged errors)
[2025-10-11 23:04:35] 2025-10-12 03:03:27,135 | INFO     | overall cleanup function is called
[2025-10-11 23:04:35] 2025-10-12 03:03:28,143 | INFO     | --- collectZombieJob: --- 10, [7868]
[2025-10-11 23:04:35] 2025-10-12 03:03:28,143 | INFO     | zombie collector waiting for pid 7868
[2025-10-11 23:04:35] 2025-10-12 03:03:28,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:04:35] 2025-10-12 03:03:28,144 | INFO     | collected zombie processes
[2025-10-11 23:04:35] 2025-10-12 03:03:28,144 | INFO     | will attempt to kill all subprocesses of pid=7868
[2025-10-11 23:04:35] 2025-10-12 03:03:28,234 | INFO     | process IDs to be killed: [7868] (in reverse order)
[2025-10-11 23:04:35] 2025-10-12 03:03:28,294 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:04:35] 2025-10-12 03:03:28,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:04:35] 2025-10-12 03:03:28,299 | INFO     | did not find any defunct processes belonging to 7868
[2025-10-11 23:04:35] 2025-10-12 03:03:28,302 | INFO     | did not find any defunct processes belonging to 7868
[2025-10-11 23:04:35] 2025-10-12 03:03:28,303 | INFO     | ready for new job
[2025-10-11 23:04:35] 2025-10-12 03:03:28,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:04:35] 2025-10-12 03:03:28,304 | INFO     | ***************************************
[2025-10-11 23:04:35] 2025-10-12 03:03:28,304 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:04:35] 2025-10-12 03:03:28,304 | INFO     | ***************************************
[2025-10-11 23:04:35] 2025-10-12 03:03:28,305 | INFO     | 
[2025-10-11 23:04:35] 2025-10-12 03:03:28,305 | INFO     | architecture information:
[2025-10-11 23:04:35] 2025-10-12 03:03:28,306 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:04:35] 2025-10-12 03:03:28,325 | INFO     | cat /etc/os-release:
[2025-10-11 23:04:35] NAME="CentOS Linux"
[2025-10-11 23:04:35] VERSION="7 (Core)"
[2025-10-11 23:04:35] ID="centos"
[2025-10-11 23:04:35] ID_LIKE="rhel fedora"
[2025-10-11 23:04:35] VERSION_ID="7"
[2025-10-11 23:04:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:04:35] ANSI_COLOR="0;31"
[2025-10-11 23:04:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:04:35] HOME_URL="https://www.centos.org/"
[2025-10-11 23:04:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:04:35] 
[2025-10-11 23:04:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:04:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:04:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:04:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:04:35] 
[2025-10-11 23:04:35] 2025-10-12 03:03:28,325 | INFO     | ***************************************
[2025-10-11 23:04:35] 2025-10-12 03:03:28,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:04:35] 2025-10-12 03:03:28,849 | INFO     | sufficient remaining disk space (18546163712 B)
[2025-10-11 23:04:35] 2025-10-12 03:03:28,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:04:35] 2025-10-12 03:03:28,850 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:04:35] 2025-10-12 03:03:28,850 | INFO     | update_server=False
[2025-10-11 23:04:35] 2025-10-12 03:03:28,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:04:35] 2025-10-12 03:03:28,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:04:35] 2025-10-12 03:03:28,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:04:35] 2025-10-12 03:03:28,852 | INFO     | aborting loop
[2025-10-11 23:04:35] 2025-10-12 03:03:29,068 | INFO     | all data control threads have been joined
[2025-10-11 23:04:35] 2025-10-12 03:03:29,856 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:29,857 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:29,857 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:29,937 | INFO     | all job control threads have been joined
[2025-10-11 23:04:35] 2025-10-12 03:03:30,027 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:04:35] 2025-10-12 03:03:30,073 | INFO     | [data] control thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,149 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,334 | INFO     | all payload control threads have been joined
[2025-10-11 23:04:35] 2025-10-12 03:03:30,364 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,759 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,901 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,924 | INFO     | [job] validate thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:30,943 | INFO     | [job] control thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:31,139 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:31,339 | INFO     | [payload] control thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:31,376 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:31,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:04:35] 2025-10-12 03:03:32,049 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:35,785 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:04:35] 2025-10-12 03:03:59,857 | INFO     | PID=1380 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 23:04:35] 2025-10-12 03:03:59,858 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:04:35] 2025-10-12 03:03:59,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:04:35] 2025-10-12 03:03:59,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:04:35] 2025-10-12 03:04:28,493 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:04:35] 2025-10-12 03:04:29,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148531365696)>', '<ExcThread(monitor, started 140147794372352)>']
[2025-10-11 23:04:35] 2025-10-12 03:04:30,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:04:35] 2025-10-12 03:04:30,011 | INFO     | [monitor] control thread has ended
[2025-10-11 23:04:35] 2025-10-12 03:04:34,809 | INFO     | all workflow threads have been joined
[2025-10-11 23:04:35] 2025-10-12 03:04:34,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:04:35] 2025-10-12 03:04:34,810 | INFO     | traces error code: 0
[2025-10-11 23:04:35] 2025-10-12 03:04:34,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:04:35] 2025-10-12 03:04:34,938 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:04:35] 2025-10-12 03:04:34,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:04:35] 2025-10-12 03:04:34,947 [wrapper] pilotpid: 1380
[2025-10-11 23:04:35] 2025-10-12 03:04:34,952 [wrapper] Pilot exit status: 0
[2025-10-11 23:04:35] 2025-10-12 03:04:34,972 [wrapper] pandaids: 6838634039
[2025-10-11 23:04:35] 2025-10-12 03:04:35,029 [wrapper] cleanup supervisor_pilot  4207 1381
[2025-10-11 23:04:35] 2025-10-12 03:04:35,033 [wrapper] Test setup, not cleaning
[2025-10-11 23:04:35] 2025-10-12 03:04:35,038 [wrapper] apfmon messages muted
[2025-10-11 23:04:35] 2025-10-12 03:04:35,042 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:04:35] 2025-10-12 03:04:35,047 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:04:35]  *** Error codes and diagnostics ***
[2025-10-11 23:04:35]     "exeErrorCode": 0,
[2025-10-11 23:04:35]     "exeErrorDiag": "",
[2025-10-11 23:04:35]     "pilotErrorCode": 0,
[2025-10-11 23:04:35]     "pilotErrorDiag": "",
[2025-10-11 23:04:35]  *** Listing of results directory ***
[2025-10-11 23:04:35] total 415304
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:07 pilot3.tar.gz
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:13 queuedata.json
[2025-10-11 23:04:35] -rwx------ 1 boincer umatlas     36292 Oct 11 13:13 runpilot2-wrapper.sh
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas       100 Oct 11 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:04:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 20:55 run_atlas
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas       105 Oct 11 20:55 job.xml
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas 221895092 Oct 11 20:55 EVNT.46676267._002472.pool.root.1
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:55 start_atlas.sh
[2025-10-11 23:04:35] drwxrwx--x 2 boincer umatlas      4096 Oct 11 20:55 shared
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 20:55 input.tar.gz
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas         0 Oct 11 20:55 boinc_lockfile
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 20:55 pandaJob.out
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas    975496 Oct 11 20:56 agis_schedconf.cvmfs.json
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas   1560580 Oct 11 20:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:04:35] drwx------ 5 boincer umatlas      4096 Oct 11 20:56 pilot3
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 23:01 init_data.xml
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas 196587234 Oct 11 23:02 HITS.46676269._061559.pool.root.1
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:02 boinc_task_state.xml
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas        95 Oct 11 23:03 pilot_heartbeat.json
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas      1051 Oct 11 23:03 memory_monitor_summary.json
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas    371164 Oct 11 23:03 log.46676269._061559.job.log.tgz.1
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas      7847 Oct 11 23:03 heartbeat.json
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:04 boinc_mmap_file
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:04 wrapper_checkpoint.txt
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas      4745 Oct 11 23:04 pilotlog.txt
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas   1072110 Oct 11 23:04 log.46676269._061559.job.log.1
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas       357 Oct 11 23:04 output.list
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:04 runtime_log
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas   1464320 Oct 11 23:04 result.tar.gz
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:04 runtime_log.err
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas       659 Oct 11 23:04 3YDLDm2KsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLISMDmMRUfXn.diag
[2025-10-11 23:04:35] -rw-r--r-- 1 boincer umatlas     20862 Oct 11 23:04 stderr.txt
[2025-10-11 23:04:35] HITS file was successfully produced:
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas 196587234 Oct 11 23:02 shared/HITS.pool.root.1
[2025-10-11 23:04:35]  *** Contents of shared directory: ***
[2025-10-11 23:04:35] total 410688
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas 221895092 Oct 11 20:55 ATLAS.root_0
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:55 start_atlas.sh
[2025-10-11 23:04:35] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 20:55 input.tar.gz
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas 196587234 Oct 11 23:02 HITS.pool.root.1
[2025-10-11 23:04:35] -rw------- 1 boincer umatlas   1464320 Oct 11 23:04 result.tar.gz
23:04:37 (30024): run_atlas exited; CPU time 55613.962111
23:04:37 (30024): called boinc_finish(0)

</stderr_txt>
]]>

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