Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:03:03 (737481): wrapper (7.7.26015): starting
22:03:03 (737481): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:03:03] Arguments: --nthreads 8
[2025-10-11 22:03:03] Threads: 8
[2025-10-11 22:03:03] Checking for CVMFS
[2025-10-11 22:03:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:03:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:03:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:03:05] 2.13.2.0 97685 137490 308060 151602 2 603 19830622 32935937 28202 16776704 0 216487392 99.617 225722299 29526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:03:05] CVMFS is ok
[2025-10-11 22:03:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:03:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:03:05] Further information can be found at the LHC@home message board.
[2025-10-11 22:03:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:03:05] Checking for apptainer binary...
[2025-10-11 22:03:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:03:05] Running /usr/bin/apptainer --version
[2025-10-11 22:03:05] apptainer version 1.4.3-1.el9
[2025-10-11 22:03:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:03:05] c6-4-5-1.aglt2.org
[2025-10-11 22:03:05] apptainer works
[2025-10-11 22:03:05] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:03:05] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:03:05] Starting ATLAS job with PandaID=6838851653
[2025-10-11 22:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:44:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:44:11] 2025-10-12 09:42:46,968 | INFO     | intersect: -7094439218.152164
[2025-10-12 05:44:11] 2025-10-12 09:42:46,968 | INFO     | chi2: 4.814331669807009
[2025-10-12 05:44:11] 2025-10-12 09:42:46,969 | INFO     | sum of square deviations: 27142143397.105854
[2025-10-12 05:44:11] 2025-10-12 09:42:46,982 | INFO     | sum of deviations: 136264066075.40747
[2025-10-12 05:44:11] 2025-10-12 09:42:46,982 | INFO     | mean x: 1760248296.231982
[2025-10-12 05:44:11] 2025-10-12 09:42:46,982 | INFO     | mean y: 2155793.957207207
[2025-10-12 05:44:11] 2025-10-12 09:42:46,982 | INFO     | -- intersect: -8834972012.701355
[2025-10-12 05:44:11] 2025-10-12 09:42:46,982 | INFO     | intersect: -8834972012.701355
[2025-10-12 05:44:11] 2025-10-12 09:42:46,989 | INFO     | chi2: 4.057261935969108
[2025-10-12 05:44:11] 2025-10-12 09:42:46,990 | INFO     | current chi2=4.057261935969108 (change=15.725333977005567 %)
[2025-10-12 05:44:11] 2025-10-12 09:42:46,990 | INFO     | right removable region: 443
[2025-10-12 05:44:11] 2025-10-12 09:42:46,990 | INFO     | sum of square deviations: 27141945147.105843
[2025-10-12 05:44:11] 2025-10-12 09:42:47,002 | INFO     | sum of deviations: 12151298157.948238
[2025-10-12 05:44:11] 2025-10-12 09:42:47,002 | INFO     | mean x: 1760248601.231982
[2025-10-12 05:44:11] 2025-10-12 09:42:47,003 | INFO     | mean y: 2168615.524774775
[2025-10-12 05:44:11] 2025-10-12 09:42:47,003 | INFO     | -- intersect: -785884910.8438723
[2025-10-12 05:44:11] 2025-10-12 09:42:47,003 | INFO     | intersect: -785884910.8438723
[2025-10-12 05:44:11] 2025-10-12 09:42:47,003 | INFO     | chi2: 2.1668733942949885
[2025-10-12 05:44:11] 2025-10-12 09:42:47,003 | INFO     | current chi2=2.1668733942949885 (change=54.99118999456364 %)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,004 | INFO     | sum of square deviations: 26235260299.348434
[2025-10-12 05:44:11] 2025-10-12 09:42:47,016 | INFO     | sum of deviations: -38262375293.72667
[2025-10-12 05:44:11] 2025-10-12 09:42:47,016 | INFO     | mean x: 1760248753.735763
[2025-10-12 05:44:11] 2025-10-12 09:42:47,016 | INFO     | mean y: 2177105.2437357632
[2025-10-12 05:44:11] 2025-10-12 09:42:47,016 | INFO     | -- intersect: 2569382372.4018865
[2025-10-12 05:44:11] 2025-10-12 09:42:47,016 | INFO     | intersect: 2569382372.4018865
[2025-10-12 05:44:11] 2025-10-12 09:42:47,017 | INFO     | chi2: 1.5143824101272916
[2025-10-12 05:44:11] 2025-10-12 09:42:47,017 | INFO     | current chi2=1.5143824101272916 (change=30.112095422168895 %)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,017 | INFO     | sum of square deviations: 25348940514.110638
[2025-10-12 05:44:11] 2025-10-12 09:42:47,029 | INFO     | sum of deviations: -75845863297.90329
[2025-10-12 05:44:11] 2025-10-12 09:42:47,038 | INFO     | mean x: 1760248906.2442396
[2025-10-12 05:44:11] 2025-10-12 09:42:47,038 | INFO     | mean y: 2183558.3387096776
[2025-10-12 05:44:11] 2025-10-12 09:42:47,038 | INFO     | -- intersect: 5268975590.099034
[2025-10-12 05:44:11] 2025-10-12 09:42:47,038 | INFO     | intersect: 5268975590.099034
[2025-10-12 05:44:11] 2025-10-12 09:42:47,039 | INFO     | chi2: 1.1124571792997124
[2025-10-12 05:44:11] 2025-10-12 09:42:47,039 | INFO     | current chi2=1.1124571792997124 (change=26.54053745868557 %)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,039 | INFO     | sum of square deviations: 24482859980.811157
[2025-10-12 05:44:11] 2025-10-12 09:42:47,051 | INFO     | sum of deviations: -93326018172.48254
[2025-10-12 05:44:11] 2025-10-12 09:42:47,051 | INFO     | mean x: 1760249058.7482517
[2025-10-12 05:44:11] 2025-10-12 09:42:47,051 | INFO     | mean y: 2186630.68997669
[2025-10-12 05:44:11] 2025-10-12 09:42:47,051 | INFO     | -- intersect: 6712065941.096909
[2025-10-12 05:44:11] 2025-10-12 09:42:47,051 | INFO     | intersect: 6712065941.096909
[2025-10-12 05:44:11] 2025-10-12 09:42:47,052 | INFO     | chi2: 1.003489962140815
[2025-10-12 05:44:11] 2025-10-12 09:42:47,052 | INFO     | current chi2=1.003489962140815 (change=9.795183058415946 %)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,052 | INFO     | left removable region: 40
[2025-10-12 05:44:11] 2025-10-12 09:42:47,052 | INFO     | sum of square deviations: 20295741278.218376
[2025-10-12 05:44:11] 2025-10-12 09:42:47,064 | INFO     | sum of deviations: -54987324159.7742
[2025-10-12 05:44:11] 2025-10-12 09:42:47,064 | INFO     | mean x: 1760249485.7841191
[2025-10-12 05:44:11] 2025-10-12 09:42:47,064 | INFO     | mean y: 2188049.129032258
[2025-10-12 05:44:11] 2025-10-12 09:42:47,064 | INFO     | -- intersect: 4771238252.817077
[2025-10-12 05:44:11] 2025-10-12 09:42:47,064 | INFO     | intersect: 4771238252.817077
[2025-10-12 05:44:11] 2025-10-12 09:42:47,065 | INFO     | chi2: 0.21291008138401907
[2025-10-12 05:44:11] 2025-10-12 09:42:47,065 | INFO     | -- intersect: 4771238252.817077
[2025-10-12 05:44:11] 2025-10-12 09:42:47,065 | INFO     | current memory leak: -2.71 B/s (using 403 data points, chi2=0.21)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,074 | INFO     | could have reported an average CPU frequency of 2860 MHz (18 samples)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,074 | INFO     | ..............................
[2025-10-12 05:44:11] 2025-10-12 09:42:47,074 | INFO     | . Timing measurements:
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . get job = 0 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . initial setup = 5 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . payload setup = 46 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . stage-in = 0 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . payload execution = 27369 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . stage-out = 7 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | . log creation = 0 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,075 | INFO     | ..............................
[2025-10-12 05:44:11] 2025-10-12 09:42:47,421 | INFO     | 
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | job summary report
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | --------------------------------------------------
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | PanDA job id: 6838851653
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | task id: 46676269
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | errors: (none)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | pilot state: finished 
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | transexitcode: 0
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | exeerrorcode: 0
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | exeerrordiag: 
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | exitcode: 0
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | exitmsg: OK
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | cpuconsumptiontime: 43116 s
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | nevents: 400
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | neventsw: 0
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | pid: 764657
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | pgrp: 764657
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | corecount: 8
[2025-10-12 05:44:11] 2025-10-12 09:42:47,423 | INFO     | event service: False
[2025-10-12 05:44:11] 2025-10-12 09:42:47,424 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 23: 2348912, 34: 2349202, 45: 2349230, 27418: 2385628, 27419: 2385627, 27427: 2394681, 27429: 2394737, 27462: 2394931}
[2025-10-12 05:44:11] 2025-10-12 09:42:47,424 | INFO     | --------------------------------------------------
[2025-10-12 05:44:11] 2025-10-12 09:42:47,424 | INFO     | 
[2025-10-12 05:44:11] 2025-10-12 09:42:47,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 05:44:11] 2025-10-12 09:42:47,503 | INFO     | time since job start (27537s) is within the limit (172800.0s)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,552 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | job 6838851653 has completed (purged errors)
[2025-10-12 05:44:11] 2025-10-12 09:42:47,554 | INFO     | overall cleanup function is called
[2025-10-12 05:44:11] 2025-10-12 09:42:48,589 | INFO     | --- collectZombieJob: --- 10, [764657]
[2025-10-12 05:44:11] 2025-10-12 09:42:48,589 | INFO     | zombie collector waiting for pid 764657
[2025-10-12 05:44:11] 2025-10-12 09:42:48,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:44:11] 2025-10-12 09:42:48,589 | INFO     | collected zombie processes
[2025-10-12 05:44:11] 2025-10-12 09:42:48,589 | INFO     | will attempt to kill all subprocesses of pid=764657
[2025-10-12 05:44:11] 2025-10-12 09:42:49,978 | INFO     | process IDs to be killed: [764657] (in reverse order)
[2025-10-12 05:44:11] 2025-10-12 09:42:50,409 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:44:11] 2025-10-12 09:42:50,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:44:11] 2025-10-12 09:42:50,591 | INFO     | did not find any defunct processes belonging to 764657
[2025-10-12 05:44:11] 2025-10-12 09:42:50,713 | INFO     | did not find any defunct processes belonging to 764657
[2025-10-12 05:44:11] 2025-10-12 09:42:50,713 | INFO     | ready for new job
[2025-10-12 05:44:11] 2025-10-12 09:42:50,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:44:11] 2025-10-12 09:42:50,758 | INFO     | ***************************************
[2025-10-12 05:44:11] 2025-10-12 09:42:50,758 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:44:11] 2025-10-12 09:42:50,758 | INFO     | ***************************************
[2025-10-12 05:44:11] 2025-10-12 09:42:50,758 | INFO     | 
[2025-10-12 05:44:11] 2025-10-12 09:42:50,875 | INFO     | architecture information:
[2025-10-12 05:44:11] 2025-10-12 09:42:50,892 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:44:11] 2025-10-12 09:42:50,996 | INFO     | cat /etc/os-release:
[2025-10-12 05:44:11] NAME="CentOS Linux"
[2025-10-12 05:44:11] VERSION="7 (Core)"
[2025-10-12 05:44:11] ID="centos"
[2025-10-12 05:44:11] ID_LIKE="rhel fedora"
[2025-10-12 05:44:11] VERSION_ID="7"
[2025-10-12 05:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:44:11] ANSI_COLOR="0;31"
[2025-10-12 05:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:44:11] HOME_URL="https://www.centos.org/"
[2025-10-12 05:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:44:11] 
[2025-10-12 05:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:44:11] 
[2025-10-12 05:44:11] 2025-10-12 09:42:50,996 | INFO     | ***************************************
[2025-10-12 05:44:11] 2025-10-12 09:42:51,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 05:44:11] 2025-10-12 09:42:51,670 | INFO     | sufficient remaining disk space (74879860736 B)
[2025-10-12 05:44:11] 2025-10-12 09:42:51,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:44:11] 2025-10-12 09:42:51,671 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:44:11] 2025-10-12 09:42:51,671 | INFO     | update_server=False
[2025-10-12 05:44:11] 2025-10-12 09:42:51,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:44:11] 2025-10-12 09:42:51,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:44:11] 2025-10-12 09:42:51,846 | INFO     | all data control threads have been joined
[2025-10-12 05:44:11] 2025-10-12 09:42:52,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:11] 2025-10-12 09:42:52,043 | INFO     | aborting loop
[2025-10-12 05:44:11] 2025-10-12 09:42:52,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:11] 2025-10-12 09:42:52,677 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:52,821 | INFO     | all payload control threads have been joined
[2025-10-12 05:44:11] 2025-10-12 09:42:52,853 | INFO     | [data] control thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:44:11] 2025-10-12 09:42:53,066 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,074 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,119 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,194 | INFO     | all job control threads have been joined
[2025-10-12 05:44:11] 2025-10-12 09:42:53,478 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,484 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,512 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,512 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,681 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:53,827 | INFO     | [payload] control thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:54,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:54,134 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:54,138 | INFO     | [job] validate thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:54,200 | INFO     | [job] control thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:42:57,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:44:11] 2025-10-12 09:43:22,435 | INFO     | PID=742162 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 05:44:11] 2025-10-12 09:43:22,435 | INFO     | .. there are 37 such processes running
[2025-10-12 05:44:11] 2025-10-12 09:43:22,435 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:44:11] 2025-10-12 09:43:22,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:44:11] 2025-10-12 09:43:22,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:44:11] 2025-10-12 09:43:42,706 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:44:11] 2025-10-12 09:43:43,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127955629888)>', '<ExcThread(monitor, started 140126638294784)>']
[2025-10-12 05:44:11] 2025-10-12 09:43:44,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:44:11] 2025-10-12 09:43:44,633 | INFO     | [monitor] control thread has ended
[2025-10-12 05:44:11] 2025-10-12 09:43:48,752 | INFO     | all workflow threads have been joined
[2025-10-12 05:44:11] 2025-10-12 09:43:48,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:44:11] 2025-10-12 09:43:48,752 | INFO     | traces error code: 0
[2025-10-12 05:44:11] 2025-10-12 09:43:48,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:44:11] 2025-10-12 09:43:49,533 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:44:11] 2025-10-12 09:43:49,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:44:11] 2025-10-12 09:43:49,640 [wrapper] pilotpid: 742162
[2025-10-12 05:44:11] 2025-10-12 09:43:49,661 [wrapper] Pilot exit status: 0
[2025-10-12 05:44:11] 2025-10-12 09:43:49,782 [wrapper] pandaids: 6838851653
[2025-10-12 05:44:11] 2025-10-12 09:43:50,045 [wrapper] cleanup supervisor_pilot 2555657 742163
[2025-10-12 05:44:11] 2025-10-12 09:43:50,071 [wrapper] Test setup, not cleaning
[2025-10-12 05:44:11] 2025-10-12 09:43:50,097 [wrapper] apfmon messages muted
[2025-10-12 05:44:11] 2025-10-12 09:43:50,107 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:44:11] 2025-10-12 09:43:50,120 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:44:11]  *** Error codes and diagnostics ***
[2025-10-12 05:44:11]     "exeErrorCode": 0,
[2025-10-12 05:44:11]     "exeErrorDiag": "",
[2025-10-12 05:44:11]     "pilotErrorCode": 0,
[2025-10-12 05:44:11]     "pilotErrorDiag": "",
[2025-10-12 05:44:11]  *** Listing of results directory ***
[2025-10-12 05:44:11] total 414120
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:43 queuedata.json
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-12 05:44:11] -rwx------. 1 boincer umatlas     36292 Oct 11 15:44 runpilot2-wrapper.sh
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:44:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:03 run_atlas
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:03 job.xml
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas 219563273 Oct 11 22:03 EVNT.46676267._002564.pool.root.1
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:03 start_atlas.sh
[2025-10-12 05:44:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:03 shared
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 22:03 input.tar.gz
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:03 boinc_lockfile
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 22:03 pandaJob.out
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas    975496 Oct 11 22:03 agis_schedconf.cvmfs.json
[2025-10-12 05:44:11] drwx------. 5 boincer umatlas      4096 Oct 11 22:03 pilot3
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas      6856 Oct 12 05:40 init_data.xml
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas 193213081 Oct 12 05:40 HITS.46676269._063826.pool.root.1
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:40 boinc_task_state.xml
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas      1050 Oct 12 05:42 memory_monitor_summary.json
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas    611785 Oct 12 05:42 log.46676269._063826.job.log.tgz.1
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas        95 Oct 12 05:42 pilot_heartbeat.json
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas      7844 Oct 12 05:42 heartbeat.json
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas      4823 Oct 12 05:43 pilotlog.txt
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas   3079226 Oct 12 05:43 log.46676269._063826.job.log.1
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas       357 Oct 12 05:43 output.list
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas       620 Oct 12 05:43 runtime_log
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas   3706880 Oct 12 05:43 result.tar.gz
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 05:43 runtime_log.err
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas       659 Oct 12 05:43 rPsKDmThuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMTSMDmtLmmQo.diag
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 05:44 boinc_mmap_file
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas        28 Oct 12 05:44 wrapper_checkpoint.txt
[2025-10-12 05:44:11] -rw-r--r--. 1 boincer umatlas     21039 Oct 12 05:44 stderr.txt
[2025-10-12 05:44:11] HITS file was successfully produced:
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas 193213081 Oct 12 05:40 shared/HITS.pool.root.1
[2025-10-12 05:44:11]  *** Contents of shared directory: ***
[2025-10-12 05:44:11] total 407308
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas 219563273 Oct 11 22:03 ATLAS.root_0
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:03 start_atlas.sh
[2025-10-12 05:44:11] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 22:03 input.tar.gz
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas 193213081 Oct 12 05:40 HITS.pool.root.1
[2025-10-12 05:44:11] -rw-------. 1 boincer umatlas   3706880 Oct 12 05:43 result.tar.gz
05:44:12 (737481): run_atlas exited; CPU time 44183.775310
05:44:12 (737481): called boinc_finish(0)

</stderr_txt>
]]>

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