Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:21 (1633744): wrapper (7.7.26015): starting
20:53:21 (1633744): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 20:53:21] Arguments: --nthreads 9
[2025-10-11 20:53:21] Threads: 9
[2025-10-11 20:53:21] Checking for CVMFS
[2025-10-11 20:53:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:53:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:53:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:53:24] 2.13.2.0 558603 128567 511552 151601 2 655 32620086 32935937 43897 16776704 0 247694441 99.610 245370216 19988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 20:53:24] CVMFS is ok
[2025-10-11 20:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:53:24] Further information can be found at the LHC@home message board.
[2025-10-11 20:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:53:24] Checking for apptainer binary...
[2025-10-11 20:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:53:24] Running /usr/bin/apptainer --version
[2025-10-11 20:53:24] apptainer version 1.4.3-1.el9
[2025-10-11 20:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:53:24] c6-6-8-3.aglt2.org
[2025-10-11 20:53:24] apptainer works
[2025-10-11 20:53:24] Set ATHENA_PROC_NUMBER=9
[2025-10-11 20:53:24] Set ATHENA_CORE_NUMBER=9
[2025-10-11 20:53:25] Starting ATLAS job with PandaID=6838632990
[2025-10-11 20:53:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:08:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:08:11] 2025-10-12 04:07:21,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:08:11] 2025-10-12 04:07:21,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:08:11] 2025-10-12 04:07:21,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:08:11] 2025-10-12 04:07:21,699 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:08:11] 2025-10-12 04:07:21,699 | INFO     | sum of square deviations: 1995577532.9516077
[2025-10-12 00:08:11] 2025-10-12 04:07:21,700 | INFO     | sum of deviations: 75395939432.14511
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | mean x: 1760236305.983871
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | mean y: 2114395.38172043
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | -- intersect: -66502277301.15533
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | intersect: -66502277301.15533
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | chi2: 3.3682105818551666
[2025-10-12 00:08:11] 2025-10-12 04:07:21,701 | INFO     | sum of square deviations: 1838910709.0165696
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | sum of deviations: 74686377714.116
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | mean x: 1760236153.4640884
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | mean y: 2113672.2486187844
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | -- intersect: -71488938927.0198
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | intersect: -71488938927.0198
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | chi2: 3.34934237069512
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | current chi2=3.34934237069512 (change=0.5601850211412346 %)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,703 | INFO     | right removable region: 180
[2025-10-12 00:08:11] 2025-10-12 04:07:21,704 | INFO     | sum of square deviations: 1838934991.237567
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | sum of deviations: 32670250205.513817
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | mean x: 1760236458.4917128
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | mean y: 2155848.3425414367
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | -- intersect: -31269947729.984867
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | intersect: -31269947729.984867
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | chi2: 0.5811782192460541
[2025-10-12 00:08:11] 2025-10-12 04:07:21,705 | INFO     | current chi2=0.5811782192460541 (change=82.74519347522657 %)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,706 | INFO     | sum of square deviations: 1690711700.0
[2025-10-12 00:08:11] 2025-10-12 04:07:21,706 | INFO     | sum of deviations: 13624222117.0
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | mean x: 1760236611.0
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | mean y: 2175411.1193181816
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | -- intersect: -14182297652.348171
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | intersect: -14182297652.348171
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | chi2: 0.10649450953050033
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | current chi2=0.10649450953050033 (change=81.67610106437702 %)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,708 | INFO     | sum of square deviations: 1550706694.736837
[2025-10-12 00:08:11] 2025-10-12 04:07:21,709 | INFO     | sum of deviations: 11178740288.210527
[2025-10-12 00:08:11] 2025-10-12 04:07:21,709 | INFO     | mean x: 1760236763.491228
[2025-10-12 00:08:11] 2025-10-12 04:07:21,709 | INFO     | mean y: 2178014.807017544
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | -- intersect: -12687023425.809723
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | intersect: -12687023425.809723
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | chi2: 0.08118224880910761
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | current chi2=0.08118224880910761 (change=23.768606318754124 %)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | left removable region: 30
[2025-10-12 00:08:11] 2025-10-12 04:07:21,710 | INFO     | sum of square deviations: 1046699400.993336
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | sum of deviations: 10438191809.039995
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | mean x: 1760237037.9933333
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | mean y: 2180787.04
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | -- intersect: -17551752858.58345
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | intersect: -17551752858.58345
[2025-10-12 00:08:11] 2025-10-12 04:07:21,711 | INFO     | chi2: 0.040044999160154714
[2025-10-12 00:08:11] 2025-10-12 04:07:21,712 | INFO     | -- intersect: -17551752858.58345
[2025-10-12 00:08:11] 2025-10-12 04:07:21,712 | INFO     | current memory leak: 9.97 B/s (using 150 data points, chi2=0.04)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,712 | INFO     | could have reported an average CPU frequency of 2656 MHz (10 samples)
[2025-10-12 00:08:11] 2025-10-12 04:07:21,712 | INFO     | ..............................
[2025-10-12 00:08:11] 2025-10-12 04:07:21,712 | INFO     | . Timing measurements:
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . get job = 0 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . initial setup = 7 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . payload setup = 51 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . stage-in = 0 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . payload execution = 11376 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . stage-out = 5 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | . log creation = 0 s
[2025-10-12 00:08:11] 2025-10-12 04:07:21,713 | INFO     | ..............................
[2025-10-12 00:08:11] 2025-10-12 04:07:22,003 | INFO     | 
[2025-10-12 00:08:11] 2025-10-12 04:07:22,003 | INFO     | job summary report
[2025-10-12 00:08:11] 2025-10-12 04:07:22,003 | INFO     | --------------------------------------------------
[2025-10-12 00:08:11] 2025-10-12 04:07:22,003 | INFO     | PanDA job id: 6838632990
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | task id: 46676269
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | errors: (none)
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | pilot state: finished 
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | transexitcode: 0
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | exeerrorcode: 0
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | exeerrordiag: 
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | exitcode: 0
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | exitmsg: OK
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | cpuconsumptiontime: 42573 s
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | nevents: 400
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | neventsw: 0
[2025-10-12 00:08:11] 2025-10-12 04:07:22,004 | INFO     | pid: 1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | pgrp: 1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | corecount: 9
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | event service: False
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | sizes: {0: 2348628, 1: 2348684, 2: 2348911, 14: 2348911, 24: 2348939, 36: 2348967, 39: 2349385, 47: 2349413, 11433: 2378560, 11439: 2387558, 11441: 2387614, 11467:
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | --------------------------------------------------
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | 
[2025-10-12 00:08:11] 2025-10-12 04:07:22,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 00:08:11] 2025-10-12 04:07:22,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:08:11] 2025-10-12 04:07:22,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:08:11] 2025-10-12 04:07:22,339 | INFO     | job 6838632990 has completed (purged errors)
[2025-10-12 00:08:11] 2025-10-12 04:07:22,339 | INFO     | overall cleanup function is called
[2025-10-12 00:08:11] 2025-10-12 04:07:23,359 | INFO     | --- collectZombieJob: --- 10, [1659483]
[2025-10-12 00:08:11] 2025-10-12 04:07:23,359 | INFO     | zombie collector waiting for pid 1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:23,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:08:11] 2025-10-12 04:07:23,359 | INFO     | collected zombie processes
[2025-10-12 00:08:11] 2025-10-12 04:07:23,359 | INFO     | will attempt to kill all subprocesses of pid=1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:24,136 | INFO     | process IDs to be killed: [1659483] (in reverse order)
[2025-10-12 00:08:11] 2025-10-12 04:07:24,364 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:08:11] 2025-10-12 04:07:24,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:08:11] 2025-10-12 04:07:24,385 | INFO     | did not find any defunct processes belonging to 1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:24,407 | INFO     | did not find any defunct processes belonging to 1659483
[2025-10-12 00:08:11] 2025-10-12 04:07:24,408 | INFO     | ready for new job
[2025-10-12 00:08:11] 2025-10-12 04:07:24,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:08:11] 2025-10-12 04:07:24,410 | INFO     | ***************************************
[2025-10-12 00:08:11] 2025-10-12 04:07:24,410 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:08:11] 2025-10-12 04:07:24,410 | INFO     | ***************************************
[2025-10-12 00:08:11] 2025-10-12 04:07:24,410 | INFO     | 
[2025-10-12 00:08:11] 2025-10-12 04:07:24,445 | INFO     | architecture information:
[2025-10-12 00:08:11] 2025-10-12 04:07:24,449 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:08:11] 2025-10-12 04:07:24,537 | INFO     | cat /etc/os-release:
[2025-10-12 00:08:11] NAME="CentOS Linux"
[2025-10-12 00:08:11] VERSION="7 (Core)"
[2025-10-12 00:08:11] ID="centos"
[2025-10-12 00:08:11] ID_LIKE="rhel fedora"
[2025-10-12 00:08:11] VERSION_ID="7"
[2025-10-12 00:08:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:08:11] ANSI_COLOR="0;31"
[2025-10-12 00:08:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:08:11] HOME_URL="https://www.centos.org/"
[2025-10-12 00:08:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:08:11] 
[2025-10-12 00:08:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:08:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:08:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:08:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:08:11] 
[2025-10-12 00:08:11] 2025-10-12 04:07:24,537 | INFO     | ***************************************
[2025-10-12 00:08:11] 2025-10-12 04:07:25,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 00:08:11] 2025-10-12 04:07:25,090 | INFO     | sufficient remaining disk space (93083140096 B)
[2025-10-12 00:08:11] 2025-10-12 04:07:25,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:08:11] 2025-10-12 04:07:25,091 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:08:11] 2025-10-12 04:07:25,091 | INFO     | update_server=False
[2025-10-12 00:08:11] 2025-10-12 04:07:25,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:08:11] 2025-10-12 04:07:25,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:08:11] 2025-10-12 04:07:25,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:08:11] 2025-10-12 04:07:25,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:08:11] 2025-10-12 04:07:25,137 | INFO     | aborting loop
[2025-10-12 00:08:11] 2025-10-12 04:07:25,481 | INFO     | all payload control threads have been joined
[2025-10-12 00:08:11] 2025-10-12 04:07:25,935 | INFO     | all data control threads have been joined
[2025-10-12 00:08:11] 2025-10-12 04:07:26,097 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,115 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,143 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,227 | INFO     | all job control threads have been joined
[2025-10-12 00:08:11] 2025-10-12 04:07:26,455 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,487 | INFO     | [payload] control thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,556 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,661 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:26,941 | INFO     | [data] control thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:27,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:27,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:08:11] 2025-10-12 04:07:27,107 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:27,175 | INFO     | [job] validate thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:27,234 | INFO     | [job] control thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:27,413 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:28,087 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:29,135 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:08:11] 2025-10-12 04:07:54,496 | INFO     | PID=1642000 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:08:11] 2025-10-12 04:07:54,497 | INFO     | .. there are 53 such processes running
[2025-10-12 00:08:11] 2025-10-12 04:07:54,497 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:08:11] 2025-10-12 04:07:54,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:08:11] 2025-10-12 04:07:54,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:08:11] 2025-10-12 04:08:04,521 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:08:11] 2025-10-12 04:08:04,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339708135232)>', '<ExcThread(monitor, started 140339356608256)>']
[2025-10-12 00:08:11] 2025-10-12 04:08:05,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:08:11] 2025-10-12 04:08:05,580 | INFO     | [monitor] control thread has ended
[2025-10-12 00:08:11] 2025-10-12 04:08:09,766 | INFO     | all workflow threads have been joined
[2025-10-12 00:08:11] 2025-10-12 04:08:09,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:08:11] 2025-10-12 04:08:09,766 | INFO     | traces error code: 0
[2025-10-12 00:08:11] 2025-10-12 04:08:09,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:08:11] 2025-10-12 04:08:10,065 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:08:11] 2025-10-12 04:08:10,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:08:11] 2025-10-12 04:08:10,110 [wrapper] pilotpid: 1642000
[2025-10-12 00:08:11] 2025-10-12 04:08:10,128 [wrapper] Pilot exit status: 0
[2025-10-12 00:08:11] 2025-10-12 04:08:10,245 [wrapper] pandaids: 6838632990
[2025-10-12 00:08:11] 2025-10-12 04:08:10,574 [wrapper] cleanup supervisor_pilot 2366115 1642001
[2025-10-12 00:08:11] 2025-10-12 04:08:10,578 [wrapper] Test setup, not cleaning
[2025-10-12 00:08:11] 2025-10-12 04:08:10,581 [wrapper] apfmon messages muted
[2025-10-12 00:08:11] 2025-10-12 04:08:10,588 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:08:11] 2025-10-12 04:08:10,594 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:08:11]  *** Error codes and diagnostics ***
[2025-10-12 00:08:11]     "exeErrorCode": 0,
[2025-10-12 00:08:11]     "exeErrorDiag": "",
[2025-10-12 00:08:11]     "pilotErrorCode": 0,
[2025-10-12 00:08:11]     "pilotErrorDiag": "",
[2025-10-12 00:08:11]  *** Listing of results directory ***
[2025-10-12 00:08:11] total 413112
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 00:08:11] -rwx------. 1 boincer umatlas     36292 Oct 11 12:40 runpilot2-wrapper.sh
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:40 queuedata.json
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas       100 Oct 11 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:08:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 20:53 run_atlas
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas       105 Oct 11 20:53 job.xml
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas 224354937 Oct 11 20:53 EVNT.46676267._002458.pool.root.1
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 20:53 input.tar.gz
[2025-10-12 00:08:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 20:53 shared
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:53 start_atlas.sh
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas         0 Oct 11 20:53 boinc_lockfile
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 20:53 pandaJob.out
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas    975496 Oct 11 20:54 agis_schedconf.cvmfs.json
[2025-10-12 00:08:11] drwx------. 5 boincer umatlas      4096 Oct 11 20:54 pilot3
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 00:04 init_data.xml
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas 191115087 Oct 12 00:05 HITS.46676269._061199.pool.root.1
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas       531 Oct 12 00:06 boinc_task_state.xml
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas      1044 Oct 12 00:06 memory_monitor_summary.json
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas    416974 Oct 12 00:06 log.46676269._061199.job.log.tgz.1
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas        95 Oct 12 00:06 pilot_heartbeat.json
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas      7829 Oct 12 00:07 heartbeat.json
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas        28 Oct 12 00:08 wrapper_checkpoint.txt
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 00:08 boinc_mmap_file
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas      4824 Oct 12 00:08 pilotlog.txt
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas   1411389 Oct 12 00:08 log.46676269._061199.job.log.1
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas       357 Oct 12 00:08 output.list
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas       620 Oct 12 00:08 runtime_log
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas   1843200 Oct 12 00:08 result.tar.gz
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas       655 Oct 12 00:08 vwkLDmporR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIzgNDmVuNqOo.diag
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 00:08 runtime_log.err
[2025-10-12 00:08:11] -rw-r--r--. 1 boincer umatlas     21011 Oct 12 00:08 stderr.txt
[2025-10-12 00:08:11] HITS file was successfully produced:
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas 191115087 Oct 12 00:05 shared/HITS.pool.root.1
[2025-10-12 00:08:11]  *** Contents of shared directory: ***
[2025-10-12 00:08:11] total 408120
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas 224354937 Oct 11 20:53 ATLAS.root_0
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 20:53 input.tar.gz
[2025-10-12 00:08:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:53 start_atlas.sh
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas 191115087 Oct 12 00:05 HITS.pool.root.1
[2025-10-12 00:08:11] -rw-------. 1 boincer umatlas   1843200 Oct 12 00:08 result.tar.gz
00:08:12 (1633744): run_atlas exited; CPU time 43133.254263
00:08:12 (1633744): called boinc_finish(0)

</stderr_txt>
]]>

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