Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:44:42 (4058): wrapper (7.7.26015): starting
02:44:42 (4058): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 02:44:42] Arguments: --nthreads 4
[2025-10-12 02:44:42] Threads: 4
[2025-10-12 02:44:42] Checking for CVMFS
[2025-10-12 02:44:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:44:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:44:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:44:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:44:51] 2.11.5.0 4266 0 25184 151602 3 1 2327763 4096001 0 130560 0 0 0.000 1291 595 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-12 02:44:51] CVMFS is ok
[2025-10-12 02:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:44:51] Checking for apptainer binary...
[2025-10-12 02:44:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:44:51] Running /usr/bin/apptainer --version
[2025-10-12 02:44:52] apptainer version 1.0.3
[2025-10-12 02:44:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:44:53] TeeC28
[2025-10-12 02:44:53] apptainer works
[2025-10-12 02:44:53] Set ATHENA_PROC_NUMBER=4
[2025-10-12 02:44:53] Set ATHENA_CORE_NUMBER=4
[2025-10-12 02:44:53] Starting ATLAS job with PandaID=6838851377
[2025-10-12 02:44:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:32:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:32:51] 2025-10-12 04:32:18,378 | INFO     | monitor loop #782: job 0:6838851377 is in state 'finished'
[2025-10-12 05:32:51] 2025-10-12 04:32:18,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,102 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:32:51] 2025-10-12 04:32:19,103 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0679999999998
[2025-10-12 05:32:51] 2025-10-12 04:32:19,103 | INFO     | using path: /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6838851377/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,104 | INFO     | extracted standard info from prmon json
[2025-10-12 05:32:51] 2025-10-12 04:32:19,104 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:32:51] 2025-10-12 04:32:19,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:32:51] 2025-10-12 04:32:19,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:32:51] 2025-10-12 04:32:19,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:32:51] 2025-10-12 04:32:19,108 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:32:51] 2025-10-12 04:32:19,108 | INFO     | sum of square deviations: 1318575722.9382708
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | sum of deviations: -47936731.333335094
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | mean x: 1760238454.7160494
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | mean y: 2361492.1666666665
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | -- intersect: 66354842.278026514
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | intersect: 66354842.278026514
[2025-10-12 05:32:51] 2025-10-12 04:32:19,110 | INFO     | chi2: 1.6114900547488444
[2025-10-12 05:32:51] 2025-10-12 04:32:19,111 | INFO     | sum of square deviations: 1200249295.1974518
[2025-10-12 05:32:51] 2025-10-12 04:32:19,112 | INFO     | sum of deviations: -352700726.8089204
[2025-10-12 05:32:51] 2025-10-12 04:32:19,112 | INFO     | mean x: 1760238302.22293
[2025-10-12 05:32:51] 2025-10-12 04:32:19,112 | INFO     | mean y: 2361099.280254777
[2025-10-12 05:32:51] 2025-10-12 04:32:19,112 | INFO     | -- intersect: 519618081.67139554
[2025-10-12 05:32:51] 2025-10-12 04:32:19,112 | INFO     | intersect: 519618081.67139554
[2025-10-12 05:32:51] 2025-10-12 04:32:19,113 | INFO     | chi2: 1.610267704326155
[2025-10-12 05:32:51] 2025-10-12 04:32:19,113 | INFO     | current chi2=1.610267704326155 (change=0.0758521853167672 %)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,113 | INFO     | right removable region: 156
[2025-10-12 05:32:51] 2025-10-12 04:32:19,113 | INFO     | sum of square deviations: 1200227945.1974518
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | sum of deviations: -19142491213.299366
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | mean x: 1760238607.22293
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | mean y: 2385621.694267516
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | -- intersect: 28076512879.689384
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | intersect: 28076512879.689384
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | chi2: 0.2629076253901076
[2025-10-12 05:32:51] 2025-10-12 04:32:19,115 | INFO     | current chi2=0.2629076253901076 (change=83.68543295595563 %)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,116 | INFO     | sum of square deviations: 1089182629.9407918
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | sum of deviations: -12301315604.782887
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | mean x: 1760238759.7302632
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | mean y: 2376185.322368421
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | -- intersect: 19882653310.555843
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | intersect: 19882653310.555843
[2025-10-12 05:32:51] 2025-10-12 04:32:19,117 | INFO     | chi2: 0.21942020396258957
[2025-10-12 05:32:51] 2025-10-12 04:32:19,118 | INFO     | current chi2=0.21942020396258957 (change=16.540950975838193 %)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,118 | INFO     | left removable region: 20
[2025-10-12 05:32:51] 2025-10-12 04:32:19,118 | INFO     | sum of square deviations: 780226900.9926479
[2025-10-12 05:32:51] 2025-10-12 04:32:19,119 | INFO     | sum of deviations: 2890295722.874996
[2025-10-12 05:32:51] 2025-10-12 04:32:19,119 | INFO     | mean x: 1760238881.7573528
[2025-10-12 05:32:51] 2025-10-12 04:32:19,119 | INFO     | mean y: 2351494.875
[2025-10-12 05:32:51] 2025-10-12 04:32:19,119 | INFO     | -- intersect: -6518329738.633871
[2025-10-12 05:32:51] 2025-10-12 04:32:19,119 | INFO     | intersect: -6518329738.633871
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | chi2: 0.0006646360732509545
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | -- intersect: -6518329738.633871
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | current memory leak: 3.70 B/s (using 136 data points, chi2=0.00)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | ..............................
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | . Timing measurements:
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | . get job = 0 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,120 | INFO     | . initial setup = 11 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | . payload setup = 6 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | . stage-in = 0 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | . payload execution = 9855 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | . stage-out = 0 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | . log creation = 0 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,121 | INFO     | ..............................
[2025-10-12 05:32:51] 2025-10-12 04:32:19,360 | INFO     | 
[2025-10-12 05:32:51] 2025-10-12 04:32:19,360 | INFO     | job summary report
[2025-10-12 05:32:51] 2025-10-12 04:32:19,361 | INFO     | --------------------------------------------------
[2025-10-12 05:32:51] 2025-10-12 04:32:19,361 | INFO     | PanDA job id: 6838851377
[2025-10-12 05:32:51] 2025-10-12 04:32:19,361 | INFO     | task id: 46676269
[2025-10-12 05:32:51] 2025-10-12 04:32:19,361 | INFO     | errors: (none)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:32:51] 2025-10-12 04:32:19,362 | INFO     | pilot state: finished 
[2025-10-12 05:32:51] 2025-10-12 04:32:19,362 | INFO     | transexitcode: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:19,363 | INFO     | exeerrorcode: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:19,363 | INFO     | exeerrordiag: 
[2025-10-12 05:32:51] 2025-10-12 04:32:19,363 | INFO     | exitcode: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:19,363 | INFO     | exitmsg: OK
[2025-10-12 05:32:51] 2025-10-12 04:32:19,364 | INFO     | cpuconsumptiontime: 37367 s
[2025-10-12 05:32:51] 2025-10-12 04:32:19,364 | INFO     | nevents: 400
[2025-10-12 05:32:51] 2025-10-12 04:32:19,364 | INFO     | neventsw: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:19,365 | INFO     | pid: 14680
[2025-10-12 05:32:51] 2025-10-12 04:32:19,365 | INFO     | pgrp: 14680
[2025-10-12 05:32:51] 2025-10-12 04:32:19,365 | INFO     | corecount: 4
[2025-10-12 05:32:51] 2025-10-12 04:32:19,365 | INFO     | event service: False
[2025-10-12 05:32:51] 2025-10-12 04:32:19,366 | INFO     | sizes: {0: 2348866, 3: 2349128, 11: 2349156, 9864: 2377644, 9865: 2386715, 9867: 2386715, 10004: 2387101}
[2025-10-12 05:32:51] 2025-10-12 04:32:19,366 | INFO     | --------------------------------------------------
[2025-10-12 05:32:51] 2025-10-12 04:32:19,366 | INFO     | 
[2025-10-12 05:32:51] 2025-10-12 04:32:19,367 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/0
[2025-10-12 05:32:51] 2025-10-12 04:32:19,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,395 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:32:51] 2025-10-12 04:32:19,400 | INFO     | job 6838851377 has completed (purged errors)
[2025-10-12 05:32:51] 2025-10-12 04:32:19,401 | INFO     | overall cleanup function is called
[2025-10-12 05:32:51] 2025-10-12 04:32:20,406 | INFO     | --- collectZombieJob: --- 10, [14680]
[2025-10-12 05:32:51] 2025-10-12 04:32:20,406 | INFO     | zombie collector waiting for pid 14680
[2025-10-12 05:32:51] 2025-10-12 04:32:20,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:32:51] 2025-10-12 04:32:20,407 | INFO     | collected zombie processes
[2025-10-12 05:32:51] 2025-10-12 04:32:20,407 | INFO     | will attempt to kill all subprocesses of pid=14680
[2025-10-12 05:32:51] 2025-10-12 04:32:20,501 | INFO     | process IDs to be killed: [14680] (in reverse order)
[2025-10-12 05:32:51] 2025-10-12 04:32:20,526 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:32:51] 2025-10-12 04:32:20,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:32:51] 2025-10-12 04:32:20,528 | INFO     | did not find any defunct processes belonging to 14680
[2025-10-12 05:32:51] 2025-10-12 04:32:20,530 | INFO     | did not find any defunct processes belonging to 14680
[2025-10-12 05:32:51] 2025-10-12 04:32:20,530 | INFO     | ready for new job
[2025-10-12 05:32:51] 2025-10-12 04:32:20,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:32:51] 2025-10-12 04:32:20,531 | INFO     | ***************************************
[2025-10-12 05:32:51] 2025-10-12 04:32:20,531 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:32:51] 2025-10-12 04:32:20,531 | INFO     | ***************************************
[2025-10-12 05:32:51] 2025-10-12 04:32:20,531 | INFO     | 
[2025-10-12 05:32:51] 2025-10-12 04:32:20,550 | INFO     | architecture information:
[2025-10-12 05:32:51] 2025-10-12 04:32:20,551 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:32:51] 2025-10-12 04:32:20,561 | INFO     | cat /etc/os-release:
[2025-10-12 05:32:51] NAME="CentOS Linux"
[2025-10-12 05:32:51] VERSION="7 (Core)"
[2025-10-12 05:32:51] ID="centos"
[2025-10-12 05:32:51] ID_LIKE="rhel fedora"
[2025-10-12 05:32:51] VERSION_ID="7"
[2025-10-12 05:32:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:32:51] ANSI_COLOR="0;31"
[2025-10-12 05:32:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:32:51] HOME_URL="https://www.centos.org/"
[2025-10-12 05:32:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:32:51] 
[2025-10-12 05:32:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:32:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:32:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:32:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:32:51] 
[2025-10-12 05:32:51] 2025-10-12 04:32:20,561 | INFO     | ***************************************
[2025-10-12 05:32:51] 2025-10-12 04:32:21,065 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/0
[2025-10-12 05:32:51] 2025-10-12 04:32:21,076 | INFO     | sufficient remaining disk space (414626873344 B)
[2025-10-12 05:32:51] 2025-10-12 04:32:21,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:32:51] 2025-10-12 04:32:21,076 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:32:51] 2025-10-12 04:32:21,076 | INFO     | update_server=False
[2025-10-12 05:32:51] 2025-10-12 04:32:21,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:32:51] 2025-10-12 04:32:21,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:32:51] 2025-10-12 04:32:21,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:32:51] 2025-10-12 04:32:21,436 | INFO     | all payload control threads have been joined
[2025-10-12 05:32:51] 2025-10-12 04:32:21,464 | INFO     | all data control threads have been joined
[2025-10-12 05:32:51] 2025-10-12 04:32:21,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:32:51] 2025-10-12 04:32:21,889 | INFO     | aborting loop
[2025-10-12 05:32:51] 2025-10-12 04:32:22,083 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,083 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,115 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,193 | INFO     | all job control threads have been joined
[2025-10-12 05:32:51] 2025-10-12 04:32:22,231 | INFO     | [job] validate thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,390 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,438 | INFO     | [payload] control thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,470 | INFO     | [data] control thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,579 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,591 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:22,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:32:51] 2025-10-12 04:32:22,896 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:23,083 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:23,200 | INFO     | [job] control thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:23,249 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:23,358 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:26,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:32,064 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:32:51] 2025-10-12 04:32:33,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:32:51] 2025-10-12 04:32:37,157 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:32:51] 2025-10-12 04:32:37,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140224228616000)>', '<ExcThread(monitor, started 140223568672512)>']
[2025-10-12 05:32:51] 2025-10-12 04:32:42,327 | INFO     | all workflow threads have been joined
[2025-10-12 05:32:51] 2025-10-12 04:32:42,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:32:51] 2025-10-12 04:32:42,329 | INFO     | traces error code: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:42,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | INFO     | PID=8314 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 05:32:51] 2025-10-12 04:32:51,013 | INFO     | [monitor] control thread has ended
[2025-10-12 05:32:51] 2025-10-12 04:32:51,119 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:32:51] 2025-10-12 04:32:51,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:32:51] 2025-10-12 04:32:51,123 [wrapper] pilotpid: 8314
[2025-10-12 05:32:51] 2025-10-12 04:32:51,124 [wrapper] Pilot exit status: 0
[2025-10-12 05:32:51] 2025-10-12 04:32:51,139 [wrapper] pandaids: 6838851377
[2025-10-12 05:32:51] 2025-10-12 04:32:51,155 [wrapper] cleanup supervisor_pilot  1681 8315
[2025-10-12 05:32:51] 2025-10-12 04:32:51,157 [wrapper] Test setup, not cleaning
[2025-10-12 05:32:51] 2025-10-12 04:32:51,159 [wrapper] apfmon messages muted
[2025-10-12 05:32:51] 2025-10-12 04:32:51,160 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:32:51] 2025-10-12 04:32:51,162 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:32:51]  *** Error codes and diagnostics ***
[2025-10-12 05:32:51]     "exeErrorCode": 0,
[2025-10-12 05:32:51]     "exeErrorDiag": "",
[2025-10-12 05:32:51]     "pilotErrorCode": 0,
[2025-10-12 05:32:51]     "pilotErrorDiag": "",
[2025-10-12 05:32:51]  *** Listing of results directory ***
[2025-10-12 05:32:51] total 408304
[2025-10-12 05:32:51] -rw-r--r-- 1 m m    557409 Oct 11 20:02 pilot3.tar.gz
[2025-10-12 05:32:51] -rw-r--r-- 1 m m      5112 Oct 11 20:41 queuedata.json
[2025-10-12 05:32:51] -rwx------ 1 m m     36292 Oct 11 20:41 runpilot2-wrapper.sh
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m       100 Oct 12 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:32:51] -rwxr-xr-x 1 m m      7986 Oct 12 02:44 run_atlas
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m       105 Oct 12 02:44 job.xml
[2025-10-12 05:32:51] -rw-r--r-- 2 m m     15120 Oct 12 02:44 start_atlas.sh
[2025-10-12 05:32:51] drwxrwx--x 2 m m      4096 Oct 12 02:44 shared
[2025-10-12 05:32:51] -rw-r--r-- 2 m m    569679 Oct 12 02:44 input.tar.gz
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m      6041 Oct 12 02:44 init_data.xml
[2025-10-12 05:32:51] -rw-r--r-- 2 m m 218169348 Oct 12 02:44 EVNT.46676267._002558.pool.root.1
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m         0 Oct 12 02:44 boinc_lockfile
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m      2550 Oct 12 02:44 pandaJob.out
[2025-10-12 05:32:51] -rw------- 1 m m    975496 Oct 12 02:45 agis_schedconf.cvmfs.json
[2025-10-12 05:32:51] -rw------- 1 m m   1560580 Oct 12 02:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:32:51] drwx------ 5 m m      4096 Oct 12 02:45 pilot3
[2025-10-12 05:32:51] -rw------- 1 m m 192523913 Oct 12 05:29 HITS.46676269._063679.pool.root.1
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m       529 Oct 12 05:29 boinc_task_state.xml
[2025-10-12 05:32:51] -rw------- 1 m m      1029 Oct 12 05:29 memory_monitor_summary.json
[2025-10-12 05:32:51] -rw------- 1 m m    349863 Oct 12 05:30 log.46676269._063679.job.log.tgz.1
[2025-10-12 05:32:51] -rw------- 1 m m        95 Oct 12 05:31 pilot_heartbeat.json
[2025-10-12 05:32:51] -rw------- 1 m m      7786 Oct 12 05:32 heartbeat.json
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m      8192 Oct 12 05:32 boinc_mmap_file
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m        28 Oct 12 05:32 wrapper_checkpoint.txt
[2025-10-12 05:32:51] -rw------- 1 m m       814 Oct 12 05:32 pilotlog.txt
[2025-10-12 05:32:51] -rw------- 1 m m   1406708 Oct 12 05:32 log.46676269._063679.job.log.1
[2025-10-12 05:32:51] -rw------- 1 m m       357 Oct 12 05:32 output.list
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m       620 Oct 12 05:32 runtime_log
[2025-10-12 05:32:51] -rw------- 1 m m   1771520 Oct 12 05:32 result.tar.gz
[2025-10-12 05:32:51] -rw------- 1 m m       645 Oct 12 05:32 SXBNDmMeuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdQhNDmKayvhm.diag
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m      8758 Oct 12 05:32 runtime_log.err
[2025-10-12 05:32:51] -rw-rw-r-- 1 m m     20812 Oct 12 05:32 stderr.txt
[2025-10-12 05:32:51] HITS file was successfully produced:
[2025-10-12 05:32:51] -rw------- 1 m m 192523913 Oct 12 05:29 shared/HITS.pool.root.1
[2025-10-12 05:32:51]  *** Contents of shared directory: ***
[2025-10-12 05:32:51] total 403384
[2025-10-12 05:32:51] -rw-r--r-- 2 m m     15120 Oct 12 02:44 start_atlas.sh
[2025-10-12 05:32:51] -rw-r--r-- 2 m m    569679 Oct 12 02:44 input.tar.gz
[2025-10-12 05:32:51] -rw-r--r-- 2 m m 218169348 Oct 12 02:44 ATLAS.root_0
[2025-10-12 05:32:51] -rw------- 1 m m 192523913 Oct 12 05:29 HITS.pool.root.1
[2025-10-12 05:32:51] -rw------- 1 m m   1771520 Oct 12 05:32 result.tar.gz
05:32:52 (4058): run_atlas exited; CPU time 37464.505004
05:32:52 (4058): called boinc_finish(0)

</stderr_txt>
]]>

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