Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:45:37 (28777): wrapper (7.7.26015): starting
20:45:37 (28777): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 20:45:37] Arguments: --nthreads 8
[2025-10-11 20:45:37] Threads: 8
[2025-10-11 20:45:37] Checking for CVMFS
[2025-10-11 20:45:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:45:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:45:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:45:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:45:37] 2.11.2.0 3643 381 59536 151601 3 188 9698246 18432000 1183 130560 0 700369 99.997 10666 32919 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 20:45:37] CVMFS is ok
[2025-10-11 20:45:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:45:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:45:37] Further information can be found at the LHC@home message board.
[2025-10-11 20:45:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:45:37] Checking for apptainer binary...
[2025-10-11 20:45:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:45:37] Running /usr/bin/apptainer --version
[2025-10-11 20:45:37] apptainer version 1.3.2-1.el7
[2025-10-11 20:45:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:45:38] c-206-15.aglt2.org
[2025-10-11 20:45:38] apptainer works
[2025-10-11 20:45:38] Set ATHENA_PROC_NUMBER=8
[2025-10-11 20:45:38] Set ATHENA_CORE_NUMBER=8
[2025-10-11 20:45:38] Starting ATLAS job with PandaID=6838851751
[2025-10-11 20:45:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:48:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:48:11] 2025-10-12 03:47:04,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:48:11] 2025-10-12 03:47:04,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:48:11] 2025-10-12 03:47:04,594 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:48:11] 2025-10-12 03:47:04,594 | INFO     | sum of square deviations: 1748737904.5
[2025-10-11 23:48:11] 2025-10-12 03:47:04,595 | INFO     | sum of deviations: 24479927506.999996
[2025-10-11 23:48:11] 2025-10-12 03:47:04,595 | INFO     | mean x: 1760235370.5
[2025-10-11 23:48:11] 2025-10-12 03:47:04,595 | INFO     | mean y: 2471935.0786516853
[2025-10-11 23:48:11] 2025-10-12 03:47:04,595 | INFO     | -- intersect: -24638404295.838135
[2025-10-11 23:48:11] 2025-10-12 03:47:04,596 | INFO     | intersect: -24638404295.838135
[2025-10-11 23:48:11] 2025-10-12 03:47:04,596 | INFO     | chi2: 1.2606370600702443
[2025-10-11 23:48:11] 2025-10-12 03:47:04,596 | INFO     | sum of square deviations: 1605470102.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,597 | INFO     | sum of deviations: 23609339167.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,597 | INFO     | mean x: 1760235218.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,597 | INFO     | mean y: 2471006.838150289
[2025-10-11 23:48:11] 2025-10-12 03:47:04,597 | INFO     | -- intersect: -25882776076.67321
[2025-10-11 23:48:11] 2025-10-12 03:47:04,597 | INFO     | intersect: -25882776076.67321
[2025-10-11 23:48:11] 2025-10-12 03:47:04,598 | INFO     | chi2: 1.2614259996273003
[2025-10-11 23:48:11] 2025-10-12 03:47:04,598 | INFO     | current chi2=1.2614259996273003 (change=-0.0625826085909282 %)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,598 | INFO     | right removable region: 172
[2025-10-11 23:48:11] 2025-10-12 03:47:04,598 | INFO     | sum of square deviations: 1605470102.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,599 | INFO     | sum of deviations: 179746930.99999872
[2025-10-11 23:48:11] 2025-10-12 03:47:04,599 | INFO     | mean x: 1760235523.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,599 | INFO     | mean y: 2497480.606936416
[2025-10-11 23:48:11] 2025-10-12 03:47:04,600 | INFO     | -- intersect: -194576842.17383602
[2025-10-11 23:48:11] 2025-10-12 03:47:04,600 | INFO     | intersect: -194576842.17383602
[2025-10-11 23:48:11] 2025-10-12 03:47:04,600 | INFO     | chi2: 0.02653696314537522
[2025-10-11 23:48:11] 2025-10-12 03:47:04,600 | INFO     | current chi2=0.02653696314537522 (change=97.89495613083939 %)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,600 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,601 | INFO     | sum of deviations: -1407203906.4999993
[2025-10-11 23:48:11] 2025-10-12 03:47:04,601 | INFO     | mean x: 1760235675.5
[2025-10-11 23:48:11] 2025-10-12 03:47:04,601 | INFO     | mean y: 2499227.0654761903
[2025-10-11 23:48:11] 2025-10-12 03:47:04,602 | INFO     | -- intersect: 1687255062.9442878
[2025-10-11 23:48:11] 2025-10-12 03:47:04,602 | INFO     | intersect: 1687255062.9442878
[2025-10-11 23:48:11] 2025-10-12 03:47:04,602 | INFO     | chi2: 0.012870446216711618
[2025-10-11 23:48:11] 2025-10-12 03:47:04,602 | INFO     | current chi2=0.012870446216711618 (change=51.49992805806553 %)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,602 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,603 | INFO     | sum of deviations: -689079119.0000001
[2025-10-11 23:48:11] 2025-10-12 03:47:04,603 | INFO     | mean x: 1760235828.0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,603 | INFO     | mean y: 2498364.9325153376
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | -- intersect: 905763100.5046268
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | intersect: 905763100.5046268
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | chi2: 0.01238379063072038
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | current chi2=0.01238379063072038 (change=3.781186586672805 %)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | left removable region: 30
[2025-10-11 23:48:11] 2025-10-12 03:47:04,604 | INFO     | sum of square deviations: 887813855.5
[2025-10-11 23:48:11] 2025-10-12 03:47:04,605 | INFO     | sum of deviations: 3405992279.0000005
[2025-10-11 23:48:11] 2025-10-12 03:47:04,605 | INFO     | mean x: 1760236102.5
[2025-10-11 23:48:11] 2025-10-12 03:47:04,605 | INFO     | mean y: 2491843.0422535213
[2025-10-11 23:48:11] 2025-10-12 03:47:04,605 | INFO     | -- intersect: -6750444639.296812
[2025-10-11 23:48:11] 2025-10-12 03:47:04,606 | INFO     | intersect: -6750444639.296812
[2025-10-11 23:48:11] 2025-10-12 03:47:04,606 | INFO     | chi2: 0.0005924856438701631
[2025-10-11 23:48:11] 2025-10-12 03:47:04,606 | INFO     | -- intersect: -6750444639.296812
[2025-10-11 23:48:11] 2025-10-12 03:47:04,606 | INFO     | current memory leak: 3.84 B/s (using 142 data points, chi2=0.00)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,606 | INFO     | could have reported an average CPU frequency of 2391 MHz (9 samples)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | ..............................
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . Timing measurements:
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . get job = 0 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . initial setup = 2 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . payload setup = 4 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . stage-in = 0 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . payload execution = 10845 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . stage-out = 1 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,607 | INFO     | . log creation = 0 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,608 | INFO     | ..............................
[2025-10-11 23:48:11] 2025-10-12 03:47:04,796 | INFO     | 
[2025-10-11 23:48:11] 2025-10-12 03:47:04,798 | INFO     | job summary report
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | --------------------------------------------------
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | PanDA job id: 6838851751
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | task id: 46676269
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | errors: (none)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | pilot state: finished 
[2025-10-11 23:48:11] 2025-10-12 03:47:04,799 | INFO     | transexitcode: 0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | exeerrorcode: 0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | exeerrordiag: 
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | exitcode: 0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | exitmsg: OK
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | cpuconsumptiontime: 82560 s
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | nevents: 400
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | neventsw: 0
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | pid: 6740
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | pgrp: 6740
[2025-10-11 23:48:11] 2025-10-12 03:47:04,800 | INFO     | corecount: 8
[2025-10-11 23:48:11] 2025-10-12 03:47:04,801 | INFO     | event service: False
[2025-10-11 23:48:11] 2025-10-12 03:47:04,801 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10854: 2378248, 10856: 2387246, 10857: 2387302, 10862: 2387688}
[2025-10-11 23:48:11] 2025-10-12 03:47:04,801 | INFO     | --------------------------------------------------
[2025-10-11 23:48:11] 2025-10-12 03:47:04,801 | INFO     | 
[2025-10-11 23:48:11] 2025-10-12 03:47:04,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 23:48:11] 2025-10-12 03:47:04,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:48:11] 2025-10-12 03:47:04,823 | INFO     | job 6838851751 has completed (purged errors)
[2025-10-11 23:48:11] 2025-10-12 03:47:04,823 | INFO     | overall cleanup function is called
[2025-10-11 23:48:11] 2025-10-12 03:47:05,830 | INFO     | --- collectZombieJob: --- 10, [6740]
[2025-10-11 23:48:11] 2025-10-12 03:47:05,831 | INFO     | zombie collector waiting for pid 6740
[2025-10-11 23:48:11] 2025-10-12 03:47:05,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:48:11] 2025-10-12 03:47:05,831 | INFO     | collected zombie processes
[2025-10-11 23:48:11] 2025-10-12 03:47:05,831 | INFO     | will attempt to kill all subprocesses of pid=6740
[2025-10-11 23:48:11] 2025-10-12 03:47:05,950 | INFO     | process IDs to be killed: [6740] (in reverse order)
[2025-10-11 23:48:11] 2025-10-12 03:47:06,035 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:48:11] 2025-10-12 03:47:06,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:48:11] 2025-10-12 03:47:06,038 | INFO     | did not find any defunct processes belonging to 6740
[2025-10-11 23:48:11] 2025-10-12 03:47:06,041 | INFO     | did not find any defunct processes belonging to 6740
[2025-10-11 23:48:11] 2025-10-12 03:47:06,041 | INFO     | ready for new job
[2025-10-11 23:48:11] 2025-10-12 03:47:06,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:48:11] 2025-10-12 03:47:06,043 | INFO     | ***************************************
[2025-10-11 23:48:11] 2025-10-12 03:47:06,043 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:48:11] 2025-10-12 03:47:06,044 | INFO     | ***************************************
[2025-10-11 23:48:11] 2025-10-12 03:47:06,044 | INFO     | 
[2025-10-11 23:48:11] 2025-10-12 03:47:06,045 | INFO     | architecture information:
[2025-10-11 23:48:11] 2025-10-12 03:47:06,045 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:48:11] 2025-10-12 03:47:06,057 | INFO     | cat /etc/os-release:
[2025-10-11 23:48:11] NAME="CentOS Linux"
[2025-10-11 23:48:11] VERSION="7 (Core)"
[2025-10-11 23:48:11] ID="centos"
[2025-10-11 23:48:11] ID_LIKE="rhel fedora"
[2025-10-11 23:48:11] VERSION_ID="7"
[2025-10-11 23:48:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:48:11] ANSI_COLOR="0;31"
[2025-10-11 23:48:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:48:11] HOME_URL="https://www.centos.org/"
[2025-10-11 23:48:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:48:11] 
[2025-10-11 23:48:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:48:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:48:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:48:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:48:11] 
[2025-10-11 23:48:11] 2025-10-12 03:47:06,057 | INFO     | ***************************************
[2025-10-11 23:48:11] 2025-10-12 03:47:06,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 23:48:11] 2025-10-12 03:47:06,573 | INFO     | sufficient remaining disk space (27671920640 B)
[2025-10-11 23:48:11] 2025-10-12 03:47:06,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:48:11] 2025-10-12 03:47:06,573 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:48:11] 2025-10-12 03:47:06,573 | INFO     | update_server=False
[2025-10-11 23:48:11] 2025-10-12 03:47:06,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:48:11] 2025-10-12 03:47:06,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:48:11] 2025-10-12 03:47:06,574 | INFO     | aborting loop
[2025-10-11 23:48:11] 2025-10-12 03:47:06,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:48:11] 2025-10-12 03:47:06,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:48:11] 2025-10-12 03:47:06,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:48:11] 2025-10-12 03:47:06,983 | INFO     | all data control threads have been joined
[2025-10-11 23:48:11] 2025-10-12 03:47:07,298 | INFO     | all payload control threads have been joined
[2025-10-11 23:48:11] 2025-10-12 03:47:07,507 | INFO     | all job control threads have been joined
[2025-10-11 23:48:11] 2025-10-12 03:47:07,577 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:07,579 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:07,580 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:07,984 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:07,989 | INFO     | [data] control thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,205 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,219 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,303 | INFO     | [payload] control thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,513 | INFO     | [job] control thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,577 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,633 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,763 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:08,978 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:09,056 | INFO     | [job] validate thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:10,578 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:17,282 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:48:11] 2025-10-12 03:47:18,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:48:11] 2025-10-12 03:47:36,549 | INFO     | PID=32491 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:48:11] 2025-10-12 03:47:36,549 | INFO     | .. there are 3 such processes running
[2025-10-11 23:48:11] 2025-10-12 03:47:36,549 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:48:11] 2025-10-12 03:47:36,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:48:11] 2025-10-12 03:47:36,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:48:11] 2025-10-12 03:48:05,980 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:48:11] 2025-10-12 03:48:06,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250315437888)>', '<ExcThread(monitor, started 140250088097536)>']
[2025-10-11 23:48:11] 2025-10-12 03:48:06,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:48:11] 2025-10-12 03:48:06,691 | INFO     | [monitor] control thread has ended
[2025-10-11 23:48:11] 2025-10-12 03:48:11,150 | INFO     | all workflow threads have been joined
[2025-10-11 23:48:11] 2025-10-12 03:48:11,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:48:11] 2025-10-12 03:48:11,150 | INFO     | traces error code: 0
[2025-10-11 23:48:11] 2025-10-12 03:48:11,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:48:11] 2025-10-12 03:48:11,243 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:48:11] 2025-10-12 03:48:11,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:48:11] 2025-10-12 03:48:11,248 [wrapper] pilotpid: 32491
[2025-10-11 23:48:11] 2025-10-12 03:48:11,250 [wrapper] Pilot exit status: 0
[2025-10-11 23:48:11] 2025-10-12 03:48:11,258 [wrapper] pandaids: 6838851751
[2025-10-11 23:48:11] 2025-10-12 03:48:11,286 [wrapper] cleanup supervisor_pilot 10535 32492
[2025-10-11 23:48:11] 2025-10-12 03:48:11,289 [wrapper] Test setup, not cleaning
[2025-10-11 23:48:11] 2025-10-12 03:48:11,291 [wrapper] apfmon messages muted
[2025-10-11 23:48:11] 2025-10-12 03:48:11,293 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:48:11] 2025-10-12 03:48:11,295 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:48:11]  *** Error codes and diagnostics ***
[2025-10-11 23:48:11]     "exeErrorCode": 0,
[2025-10-11 23:48:11]     "exeErrorDiag": "",
[2025-10-11 23:48:11]     "pilotErrorCode": 0,
[2025-10-11 23:48:11]     "pilotErrorDiag": "",
[2025-10-11 23:48:11]  *** Listing of results directory ***
[2025-10-11 23:48:11] total 407228
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-11 23:48:11] -rwx------ 1 boincer umatlas     36292 Oct 11 15:48 runpilot2-wrapper.sh
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 15:48 queuedata.json
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas       100 Oct 11 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:48:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 20:45 run_atlas
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas       105 Oct 11 20:45 job.xml
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas 219825270 Oct 11 20:45 EVNT.46676267._002569.pool.root.1
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:45 start_atlas.sh
[2025-10-11 23:48:11] drwxrwx--x 2 boincer umatlas      4096 Oct 11 20:45 shared
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 20:45 input.tar.gz
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas         0 Oct 11 20:45 boinc_lockfile
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 20:45 pandaJob.out
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas    975496 Oct 11 20:45 agis_schedconf.cvmfs.json
[2025-10-11 23:48:11] drwx------ 5 boincer umatlas      4096 Oct 11 20:45 pilot3
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas 189378658 Oct 11 23:46 HITS.46676269._063924.pool.root.1
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas        95 Oct 11 23:46 pilot_heartbeat.json
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 23:46 init_data.xml
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:46 boinc_task_state.xml
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas      1053 Oct 11 23:46 memory_monitor_summary.json
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas   1560580 Oct 11 23:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas    423059 Oct 11 23:46 log.46676269._063924.job.log.tgz.1
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas      7859 Oct 11 23:47 heartbeat.json
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas        28 Oct 11 23:48 wrapper_checkpoint.txt
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:48 boinc_mmap_file
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas      4893 Oct 11 23:48 pilotlog.txt
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas   1523026 Oct 11 23:48 log.46676269._063924.job.log.1
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas       357 Oct 11 23:48 output.list
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:48 runtime_log
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas   1966080 Oct 11 23:48 result.tar.gz
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 23:48 runtime_log.err
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas       660 Oct 11 23:48 ag7KDmNluR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNShNDmUMShKm.diag
[2025-10-11 23:48:11] -rw-r--r-- 1 boincer umatlas     20862 Oct 11 23:48 stderr.txt
[2025-10-11 23:48:11] HITS file was successfully produced:
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas 189378658 Oct 11 23:46 shared/HITS.pool.root.1
[2025-10-11 23:48:11]  *** Contents of shared directory: ***
[2025-10-11 23:48:11] total 402120
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas 219825270 Oct 11 20:45 ATLAS.root_0
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:45 start_atlas.sh
[2025-10-11 23:48:11] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 20:45 input.tar.gz
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas 189378658 Oct 11 23:46 HITS.pool.root.1
[2025-10-11 23:48:11] -rw------- 1 boincer umatlas   1966080 Oct 11 23:48 result.tar.gz
23:48:12 (28777): run_atlas exited; CPU time 82669.486572
23:48:12 (28777): called boinc_finish(0)

</stderr_txt>
]]>

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