Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:54:55 (2375913): wrapper (7.7.26015): starting
20:54:55 (2375913): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 20:54:55] Arguments: --nthreads 8
[2025-10-11 20:54:55] Threads: 8
[2025-10-11 20:54:55] Checking for CVMFS
[2025-10-11 20:54:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:54:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:54:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:54:56] 2.13.2.0 4298 23657 224728 151601 2 196 23337941 32935936 4331 16776704 0 68030328 99.717 51555896 29847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 20:54:56] CVMFS is ok
[2025-10-11 20:54:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:54:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:54:56] Further information can be found at the LHC@home message board.
[2025-10-11 20:54:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:54:56] Checking for apptainer binary...
[2025-10-11 20:54:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:54:56] Running /usr/bin/apptainer --version
[2025-10-11 20:54:56] apptainer version 1.4.3-1.el9
[2025-10-11 20:54:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:54:56] c-8-24.aglt2.org
[2025-10-11 20:54:56] apptainer works
[2025-10-11 20:54:56] Set ATHENA_PROC_NUMBER=8
[2025-10-11 20:54:56] Set ATHENA_CORE_NUMBER=8
[2025-10-11 20:54:56] Starting ATLAS job with PandaID=6838631596
[2025-10-11 20:54:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:32:25]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:32:25]  status=None
[2025-10-11 22:32:25]  status_code=0
[2025-10-11 22:32:25]  storage_token=
[2025-10-11 22:32:25]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6838631596/log.46676269._060401.job.log.tgz.1
[2025-10-11 22:32:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/12/log.46676269._060401.job.log.tgz.1
[2025-10-11 22:32:25]  workdir=None
[2025-10-11 22:32:25] ]
[2025-10-11 22:32:25] 2025-10-12 02:31:45,761 | INFO     | transferring file log.46676269._060401.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6838631596/log.46676269._060401.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 22:32:25] 2025-10-12 02:31:45,761 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6838631596/log.46676269._060401.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._060401.job
[2025-10-11 22:32:25] 2025-10-12 02:31:45,779 | INFO     | adding to output.list: log.46676269._060401.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/12/log.46676269._060401.job.log.tg
[2025-10-11 22:32:25] 2025-10-12 02:31:45,779 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 22:32:25] 2025-10-12 02:31:45,780 | INFO     | summary of transferred files:
[2025-10-11 22:32:25] 2025-10-12 02:31:45,780 | INFO     |  -- lfn=log.46676269._060401.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 22:32:25] 2025-10-12 02:31:45,780 | INFO     | stage-out finished correctly
[2025-10-11 22:32:25] 2025-10-12 02:31:47,340 | INFO     | time since job start (5800s) is within the limit (172800.0s)
[2025-10-11 22:32:25] 2025-10-12 02:31:47,512 | INFO     | monitor loop #430: job 0:6838631596 is in state 'finished'
[2025-10-11 22:32:25] 2025-10-12 02:31:47,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:32:25] 2025-10-12 02:31:48,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 22:32:25] 2025-10-12 02:31:49,345 | INFO     | time since job start (5802s) is within the limit (172800.0s)
[2025-10-11 22:32:25] 2025-10-12 02:31:49,817 | INFO     | job 6838631596 has state=finished
[2025-10-11 22:32:25] 2025-10-12 02:31:49,818 | INFO     | preparing for final server update for job 6838631596 in state='finished'
[2025-10-11 22:32:25] 2025-10-12 02:31:49,818 | INFO     | this job has now completed (state=finished)
[2025-10-11 22:32:25] 2025-10-12 02:31:49,818 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 22:32:25] 2025-10-12 02:31:49,819 | INFO     | log transfer has been attempted: DONE
[2025-10-11 22:32:25] 2025-10-12 02:31:49,819 | INFO     | job 6838631596 has finished - writing final server update
[2025-10-11 22:32:25] 2025-10-12 02:31:49,819 | INFO     | total number of processed events: 400 (read)
[2025-10-11 22:32:25] 2025-10-12 02:31:49,820 | INFO     | executing command: lscpu
[2025-10-11 22:32:25] 2025-10-12 02:31:49,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 22:32:25] 2025-10-12 02:31:50,015 | INFO     | monitor loop #431: job 0:6838631596 is in state 'finished'
[2025-10-11 22:32:25] 2025-10-12 02:31:50,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:32:25] 2025-10-12 02:31:51,352 | INFO     | time since job start (5804s) is within the limit (172800.0s)
[2025-10-11 22:32:25] 2025-10-12 02:31:52,519 | INFO     | monitor loop #432: job 0:6838631596 is in state 'finished'
[2025-10-11 22:32:25] 2025-10-12 02:31:52,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:32:25] 2025-10-12 02:31:52,669 | INFO     | PID=2380070 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 22:32:25] 2025-10-12 02:31:52,670 | INFO     | .. there are 6 such processes running
[2025-10-11 22:32:25] 2025-10-12 02:31:53,302 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 22:32:25] 2025-10-12 02:31:53,320 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2720.14065
[2025-10-11 22:32:25] 2025-10-12 02:31:53,327 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838631596/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,328 | INFO     | extracted standard info from prmon json
[2025-10-11 22:32:25] 2025-10-12 02:31:53,328 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:32:25] 2025-10-12 02:31:53,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:32:25] 2025-10-12 02:31:53,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:32:25] 2025-10-12 02:31:53,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:32:25] 2025-10-12 02:31:53,331 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:32:25] 2025-10-12 02:31:53,331 | INFO     | sum of square deviations: 211285822.0
[2025-10-11 22:32:25] 2025-10-12 02:31:53,332 | INFO     | sum of deviations: -1297332231.5000002
[2025-10-11 22:32:25] 2025-10-12 02:31:53,332 | INFO     | mean x: 1760233489.5
[2025-10-11 22:32:25] 2025-10-12 02:31:53,332 | INFO     | mean y: 2193388.0795454546
[2025-10-11 22:32:25] 2025-10-12 02:31:53,332 | INFO     | -- intersect: 10810337632.107748
[2025-10-11 22:32:25] 2025-10-12 02:31:53,332 | INFO     | intersect: 10810337632.107748
[2025-10-11 22:32:25] 2025-10-12 02:31:53,333 | INFO     | chi2: 0.08428298007866218
[2025-10-11 22:32:25] 2025-10-12 02:31:53,333 | INFO     | -- intersect: 10810337632.107748
[2025-10-11 22:32:25] 2025-10-12 02:31:53,333 | INFO     | current memory leak: -6.14 B/s (using 88 data points, chi2=0.08)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,333 | INFO     | could have reported an average CPU frequency of 2665 MHz (7 samples)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | ..............................
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . Timing measurements:
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . get job = 0 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . initial setup = 2 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . payload setup = 5 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . stage-in = 0 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . payload execution = 5774 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,334 | INFO     | . stage-out = 1 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,335 | INFO     | . log creation = 0 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,335 | INFO     | ..............................
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | 
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | job summary report
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | --------------------------------------------------
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | PanDA job id: 6838631596
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | task id: 46676269
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | errors: (none)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | pilot state: finished 
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | transexitcode: 0
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | exeerrorcode: 0
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | exeerrordiag: 
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | exitcode: 0
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | exitmsg: OK
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | cpuconsumptiontime: 41961 s
[2025-10-11 22:32:25] 2025-10-12 02:31:53,446 | INFO     | nevents: 400
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | neventsw: 0
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | pid: 2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | pgrp: 2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | corecount: 8
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | event service: False
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 5782: 2375933, 5784: 2384931, 5787: 2385115, 5791: 2385309}
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | --------------------------------------------------
[2025-10-11 22:32:25] 2025-10-12 02:31:53,447 | INFO     | 
[2025-10-11 22:32:25] 2025-10-12 02:31:53,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 22:32:25] 2025-10-12 02:31:53,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:32:25] 2025-10-12 02:31:53,469 | INFO     | job 6838631596 has completed (purged errors)
[2025-10-11 22:32:25] 2025-10-12 02:31:53,469 | INFO     | overall cleanup function is called
[2025-10-11 22:32:25] 2025-10-12 02:31:54,477 | INFO     | --- collectZombieJob: --- 10, [2386784]
[2025-10-11 22:32:25] 2025-10-12 02:31:54,477 | INFO     | zombie collector waiting for pid 2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:54,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:32:25] 2025-10-12 02:31:54,478 | INFO     | collected zombie processes
[2025-10-11 22:32:25] 2025-10-12 02:31:54,478 | INFO     | will attempt to kill all subprocesses of pid=2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:54,742 | INFO     | process IDs to be killed: [2386784] (in reverse order)
[2025-10-11 22:32:25] 2025-10-12 02:31:54,813 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:32:25] 2025-10-12 02:31:54,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:32:25] 2025-10-12 02:31:54,824 | INFO     | did not find any defunct processes belonging to 2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:54,832 | INFO     | did not find any defunct processes belonging to 2386784
[2025-10-11 22:32:25] 2025-10-12 02:31:54,832 | INFO     | ready for new job
[2025-10-11 22:32:25] 2025-10-12 02:31:54,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:32:25] 2025-10-12 02:31:54,834 | INFO     | ***************************************
[2025-10-11 22:32:25] 2025-10-12 02:31:54,834 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:32:25] 2025-10-12 02:31:54,835 | INFO     | ***************************************
[2025-10-11 22:32:25] 2025-10-12 02:31:54,835 | INFO     | 
[2025-10-11 22:32:25] 2025-10-12 02:31:54,848 | INFO     | architecture information:
[2025-10-11 22:32:25] 2025-10-12 02:31:54,849 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:32:25] 2025-10-12 02:31:54,861 | INFO     | cat /etc/os-release:
[2025-10-11 22:32:25] NAME="CentOS Linux"
[2025-10-11 22:32:25] VERSION="7 (Core)"
[2025-10-11 22:32:25] ID="centos"
[2025-10-11 22:32:25] ID_LIKE="rhel fedora"
[2025-10-11 22:32:25] VERSION_ID="7"
[2025-10-11 22:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:32:25] ANSI_COLOR="0;31"
[2025-10-11 22:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:32:25] HOME_URL="https://www.centos.org/"
[2025-10-11 22:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:32:25] 
[2025-10-11 22:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:32:25] 
[2025-10-11 22:32:25] 2025-10-12 02:31:54,861 | INFO     | ***************************************
[2025-10-11 22:32:25] 2025-10-12 02:31:55,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 22:32:25] 2025-10-12 02:31:55,376 | INFO     | sufficient remaining disk space (74439458816 B)
[2025-10-11 22:32:25] 2025-10-12 02:31:55,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:32:25] 2025-10-12 02:31:55,377 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:32:25] 2025-10-12 02:31:55,377 | INFO     | update_server=False
[2025-10-11 22:32:25] 2025-10-12 02:31:55,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:32:25] 2025-10-12 02:31:55,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:32:25] 2025-10-12 02:31:55,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:32:25] 2025-10-12 02:31:56,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:32:25] 2025-10-12 02:31:56,027 | INFO     | aborting loop
[2025-10-11 22:32:25] 2025-10-12 02:31:56,184 | INFO     | all data control threads have been joined
[2025-10-11 22:32:25] 2025-10-12 02:31:56,384 | INFO     | all payload control threads have been joined
[2025-10-11 22:32:25] 2025-10-12 02:31:56,385 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:56,386 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:56,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:32:25] 2025-10-12 02:31:56,482 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:56,552 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:56,980 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,033 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,087 | INFO     | all job control threads have been joined
[2025-10-11 22:32:25] 2025-10-12 02:31:57,186 | INFO     | [data] control thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,256 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,387 | INFO     | [payload] control thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,484 | INFO     | [job] validate thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,559 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:57,647 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:58,092 | INFO     | [job] control thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:58,412 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:31:59,386 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:32:06,143 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:32:25] 2025-10-12 02:32:07,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:32:25] 2025-10-12 02:32:16,184 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:32:25] 2025-10-12 02:32:16,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342906087232)>', '<ExcThread(monitor, started 140342284252928)>']
[2025-10-11 22:32:25] 2025-10-12 02:32:21,324 | INFO     | all workflow threads have been joined
[2025-10-11 22:32:25] 2025-10-12 02:32:21,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:32:25] 2025-10-12 02:32:21,324 | INFO     | traces error code: 0
[2025-10-11 22:32:25] 2025-10-12 02:32:21,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:32:25] 2025-10-12 02:32:25,079 | INFO     | PID=2380070 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:32:25] 2025-10-12 02:32:25,079 | INFO     | .. there are 6 such processes running
[2025-10-11 22:32:25] 2025-10-12 02:32:25,079 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:32:25] 2025-10-12 02:32:25,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:32:25] 2025-10-12 02:32:25,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:32:25] 2025-10-12 02:32:25,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:32:25] 2025-10-12 02:32:25,080 | INFO     | [monitor] control thread has ended
[2025-10-11 22:32:25] 2025-10-12 02:32:25,197 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:32:25] 2025-10-12 02:32:25,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:32:25] 2025-10-12 02:32:25,202 [wrapper] pilotpid: 2380070
[2025-10-11 22:32:25] 2025-10-12 02:32:25,204 [wrapper] Pilot exit status: 0
[2025-10-11 22:32:25] 2025-10-12 02:32:25,214 [wrapper] pandaids: 6838631596
[2025-10-11 22:32:25] 2025-10-12 02:32:25,262 [wrapper] cleanup supervisor_pilot 2631986 2380071
[2025-10-11 22:32:25] 2025-10-12 02:32:25,265 [wrapper] Test setup, not cleaning
[2025-10-11 22:32:25] 2025-10-12 02:32:25,267 [wrapper] apfmon messages muted
[2025-10-11 22:32:25] 2025-10-12 02:32:25,269 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:32:25] 2025-10-12 02:32:25,271 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:32:25]  *** Error codes and diagnostics ***
[2025-10-11 22:32:25]     "exeErrorCode": 0,
[2025-10-11 22:32:25]     "exeErrorDiag": "",
[2025-10-11 22:32:25]     "pilotErrorCode": 0,
[2025-10-11 22:32:25]     "pilotErrorDiag": "",
[2025-10-11 22:32:25]  *** Listing of results directory ***
[2025-10-11 22:32:25] total 404700
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-11 22:32:25] -rwx------. 1 boincer umatlas     36292 Oct 11 12:00 runpilot2-wrapper.sh
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:00 queuedata.json
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas       100 Oct 11 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:32:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 20:54 run_atlas
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas       105 Oct 11 20:54 job.xml
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas 218250263 Oct 11 20:54 EVNT.46676267._002425.pool.root.1
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:54 start_atlas.sh
[2025-10-11 22:32:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 20:54 shared
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 20:54 input.tar.gz
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas         0 Oct 11 20:54 boinc_lockfile
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 20:54 pandaJob.out
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas    975496 Oct 11 20:55 agis_schedconf.cvmfs.json
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas   1560580 Oct 11 20:55 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:32:25] drwx------. 5 boincer umatlas      4096 Oct 11 20:55 pilot3
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 22:29 init_data.xml
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas       529 Oct 11 22:31 boinc_task_state.xml
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas 189886466 Oct 11 22:31 HITS.46676269._060401.pool.root.1
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas      1033 Oct 11 22:31 memory_monitor_summary.json
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas    335471 Oct 11 22:31 log.46676269._060401.job.log.tgz.1
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas        95 Oct 11 22:31 pilot_heartbeat.json
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas      7812 Oct 11 22:31 heartbeat.json
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:32 boinc_mmap_file
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas        27 Oct 11 22:32 wrapper_checkpoint.txt
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas       822 Oct 11 22:32 pilotlog.txt
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas    848405 Oct 11 22:32 log.46676269._060401.job.log.1
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas       357 Oct 11 22:32 output.list
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:32 runtime_log
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas   1208320 Oct 11 22:32 result.tar.gz
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 22:32 runtime_log.err
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas       649 Oct 11 22:32 jx0MDmqCrR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmECSMDmeJjCdn.diag
[2025-10-11 22:32:25] -rw-r--r--. 1 boincer umatlas     22071 Oct 11 22:32 stderr.txt
[2025-10-11 22:32:25] HITS file was successfully produced:
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas 189886466 Oct 11 22:31 shared/HITS.pool.root.1
[2025-10-11 22:32:25]  *** Contents of shared directory: ***
[2025-10-11 22:32:25] total 400340
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas 218250263 Oct 11 20:54 ATLAS.root_0
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:54 start_atlas.sh
[2025-10-11 22:32:25] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 20:54 input.tar.gz
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas 189886466 Oct 11 22:31 HITS.pool.root.1
[2025-10-11 22:32:25] -rw-------. 1 boincer umatlas   1208320 Oct 11 22:32 result.tar.gz
22:32:27 (2375913): run_atlas exited; CPU time 42117.149719
22:32:27 (2375913): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN