Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:31:21 (2577139): wrapper (7.7.26015): starting
21:31:21 (2577139): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:31:22] Arguments: --nthreads 8
[2025-10-11 21:31:22] Threads: 8
[2025-10-11 21:31:22] Checking for CVMFS
[2025-10-11 21:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:31:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:31:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:31:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:31:26] 2.13.2.0 1061588 21974 383848 151602 1 255 21036396 40960001 56653 16776704 0 79312724 99.799 41627498 15751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:31:26] CVMFS is ok
[2025-10-11 21:31:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:31:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:31:26] Further information can be found at the LHC@home message board.
[2025-10-11 21:31:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:31:26] Checking for apptainer binary...
[2025-10-11 21:31:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:31:26] Running /usr/bin/apptainer --version
[2025-10-11 21:31:26] apptainer version 1.4.3-1.el9
[2025-10-11 21:31:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:31:27] c-1-1.aglt2.org
[2025-10-11 21:31:27] apptainer works
[2025-10-11 21:31:27] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:31:27] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:31:27] Starting ATLAS job with PandaID=6838990455
[2025-10-11 21:31:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:00:08 (2577139): BOINC client no longer exists - exiting
01:00:08 (2577139): timer handler: client dead, exiting
01:45:19 (3710320): wrapper (7.7.26015): starting
01:45:19 (3710320): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 01:45:19] Arguments: --nthreads 9
[2025-10-12 01:45:19] Threads: 9
[2025-10-12 01:45:19] This job has been restarted, cleaning up previous attempt
[2025-10-12 01:45:19] Checking for CVMFS
[2025-10-12 01:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:45:23] 2.13.2.0 1061588 22228 385896 151609 3 303 22595327 40960000 53339 16776704 0 80700980 99.800 42182454 15738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 01:45:23] CVMFS is ok
[2025-10-12 01:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:45:23] Further information can be found at the LHC@home message board.
[2025-10-12 01:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:45:23] Checking for apptainer binary...
[2025-10-12 01:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:45:23] Running /usr/bin/apptainer --version
[2025-10-12 01:45:24] apptainer version 1.4.3-1.el9
[2025-10-12 01:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:45:25] c-1-1.aglt2.org
[2025-10-12 01:45:25] apptainer works
[2025-10-12 01:45:25] Set ATHENA_PROC_NUMBER=9
[2025-10-12 01:45:25] Set ATHENA_CORE_NUMBER=9
[2025-10-12 01:45:25] Starting ATLAS job with PandaID=6838990455
[2025-10-12 01:45:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:40:13 (3710320): BOINC client no longer exists - exiting
12:40:13 (3710320): timer handler: client dead, exiting
12:46:00 (2081617): wrapper (7.7.26015): starting
12:46:00 (2081617): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 12:46:00] Arguments: --nthreads 9
[2025-10-12 12:46:00] Threads: 9
[2025-10-12 12:46:00] This job has been restarted, cleaning up previous attempt
[2025-10-12 12:46:00] Checking for CVMFS
[2025-10-12 12:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:46:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:46:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:46:04] 2.13.2.0 1061588 22889 393184 151627 0 181 25288485 40960000 52160 16776704 0 82973543 99.802 42979410 15743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:46:04] CVMFS is ok
[2025-10-12 12:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:46:04] Further information can be found at the LHC@home message board.
[2025-10-12 12:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:46:04] Checking for apptainer binary...
[2025-10-12 12:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:46:04] Running /usr/bin/apptainer --version
[2025-10-12 12:46:04] apptainer version 1.4.3-1.el9
[2025-10-12 12:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:46:05] c-1-1.aglt2.org
[2025-10-12 12:46:05] apptainer works
[2025-10-12 12:46:05] Set ATHENA_PROC_NUMBER=9
[2025-10-12 12:46:05] Set ATHENA_CORE_NUMBER=9
[2025-10-12 12:46:05] Starting ATLAS job with PandaID=6838990455
[2025-10-12 12:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:29:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:29:43] 2025-10-13 03:28:51,704 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838990455/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,706 | INFO     | extracted standard info from prmon json
[2025-10-12 23:29:43] 2025-10-13 03:28:51,706 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:29:43] 2025-10-13 03:28:51,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:29:43] 2025-10-13 03:28:51,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:29:43] 2025-10-13 03:28:51,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:29:43] 2025-10-13 03:28:51,724 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:29:43] 2025-10-13 03:28:51,725 | INFO     | sum of square deviations: 76799213721.0826
[2025-10-12 23:29:43] 2025-10-13 03:28:51,742 | INFO     | sum of deviations: 300907644730.36334
[2025-10-12 23:29:43] 2025-10-13 03:28:51,742 | INFO     | mean x: 1760306938.0382166
[2025-10-12 23:29:43] 2025-10-13 03:28:51,742 | INFO     | mean y: 2527240.6098726112
[2025-10-12 23:29:43] 2025-10-13 03:28:51,742 | INFO     | -- intersect: -6894546167.606404
[2025-10-12 23:29:43] 2025-10-13 03:28:51,742 | INFO     | intersect: -6894546167.606404
[2025-10-12 23:29:43] 2025-10-13 03:28:51,744 | INFO     | chi2: 3.8076078313481947
[2025-10-12 23:29:43] 2025-10-13 03:28:51,745 | INFO     | sum of square deviations: 74979467514.70618
[2025-10-12 23:29:43] 2025-10-13 03:28:51,761 | INFO     | sum of deviations: 341612423679.7285
[2025-10-12 23:29:43] 2025-10-13 03:28:51,761 | INFO     | mean x: 1760306785.540931
[2025-10-12 23:29:43] 2025-10-13 03:28:51,762 | INFO     | mean y: 2530628.2263242374
[2025-10-12 23:29:43] 2025-10-13 03:28:51,762 | INFO     | -- intersect: -8017567238.040392
[2025-10-12 23:29:43] 2025-10-13 03:28:51,762 | INFO     | intersect: -8017567238.040392
[2025-10-12 23:29:43] 2025-10-13 03:28:51,763 | INFO     | chi2: 3.0064606832915115
[2025-10-12 23:29:43] 2025-10-13 03:28:51,763 | INFO     | current chi2=3.0064606832915115 (change=21.04069493346466 %)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,763 | INFO     | right removable region: 622
[2025-10-12 23:29:43] 2025-10-13 03:28:51,765 | INFO     | sum of square deviations: 74979299764.62262
[2025-10-12 23:29:43] 2025-10-13 03:28:51,774 | INFO     | time since job start (38491s) is within the limit (172800.0s)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,794 | INFO     | sum of deviations: 133992800357.67903
[2025-10-12 23:29:43] 2025-10-13 03:28:51,794 | INFO     | mean x: 1760307090.542536
[2025-10-12 23:29:43] 2025-10-13 03:28:51,795 | INFO     | mean y: 2541208.8234349918
[2025-10-12 23:29:43] 2025-10-13 03:28:51,795 | INFO     | -- intersect: -3143240057.3622804
[2025-10-12 23:29:43] 2025-10-13 03:28:51,795 | INFO     | intersect: -3143240057.3622804
[2025-10-12 23:29:43] 2025-10-13 03:28:51,796 | INFO     | chi2: 1.1988019013730629
[2025-10-12 23:29:43] 2025-10-13 03:28:51,797 | INFO     | current chi2=1.1988019013730629 (change=68.51561519799185 %)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,798 | INFO     | sum of square deviations: 73188400976.73123
[2025-10-12 23:29:43] 2025-10-13 03:28:51,805 | INFO     | monitor loop #1432: job 0:6838990455 is in state 'finished'
[2025-10-12 23:29:43] 2025-10-13 03:28:51,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,814 | INFO     | sum of deviations: 75520196395.13284
[2025-10-12 23:29:43] 2025-10-13 03:28:51,815 | INFO     | mean x: 1760307243.0453074
[2025-10-12 23:29:43] 2025-10-13 03:28:51,815 | INFO     | mean y: 2546184.4595469255
[2025-10-12 23:29:43] 2025-10-13 03:28:51,815 | INFO     | -- intersect: -1813844759.1384916
[2025-10-12 23:29:43] 2025-10-13 03:28:51,815 | INFO     | intersect: -1813844759.1384916
[2025-10-12 23:29:43] 2025-10-13 03:28:51,817 | INFO     | chi2: 0.9177399576319495
[2025-10-12 23:29:43] 2025-10-13 03:28:51,817 | INFO     | current chi2=0.9177399576319495 (change=23.44523673337484 %)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,817 | INFO     | left removable region: 20
[2025-10-12 23:29:43] 2025-10-13 03:28:51,818 | INFO     | sum of square deviations: 67649856257.60291
[2025-10-12 23:29:43] 2025-10-13 03:28:51,834 | INFO     | sum of deviations: 74867684671.57309
[2025-10-12 23:29:43] 2025-10-13 03:28:51,835 | INFO     | mean x: 1760307365.0481727
[2025-10-12 23:29:43] 2025-10-13 03:28:51,835 | INFO     | mean y: 2553486.5664451825
[2025-10-12 23:29:43] 2025-10-13 03:28:51,835 | INFO     | -- intersect: -1945567973.2875497
[2025-10-12 23:29:43] 2025-10-13 03:28:51,835 | INFO     | intersect: -1945567973.2875497
[2025-10-12 23:29:43] 2025-10-13 03:28:51,837 | INFO     | chi2: 0.008689113733132045
[2025-10-12 23:29:43] 2025-10-13 03:28:51,837 | INFO     | -- intersect: -1945567973.2875497
[2025-10-12 23:29:43] 2025-10-13 03:28:51,838 | INFO     | current memory leak: 1.11 B/s (using 602 data points, chi2=0.01)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,839 | INFO     | could have reported an average CPU frequency of 1749 MHz (24 samples)
[2025-10-12 23:29:43] 2025-10-13 03:28:51,839 | INFO     | ..............................
[2025-10-12 23:29:43] 2025-10-13 03:28:51,839 | INFO     | . Timing measurements:
[2025-10-12 23:29:43] 2025-10-13 03:28:51,839 | INFO     | . get job = 0 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,839 | INFO     | . initial setup = 5 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | . payload setup = 51 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | . stage-in = 0 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | . payload execution = 38315 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | . stage-out = 5 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | . log creation = 0 s
[2025-10-12 23:29:43] 2025-10-13 03:28:51,840 | INFO     | ..............................
[2025-10-12 23:29:43] 2025-10-13 03:28:52,231 | INFO     | 
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | job summary report
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | --------------------------------------------------
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | PanDA job id: 6838990455
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | task id: 46676269
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | errors: (none)
[2025-10-12 23:29:43] 2025-10-13 03:28:52,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | pilot state: finished 
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | transexitcode: 0
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | exeerrorcode: 0
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | exeerrordiag: 
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | exitcode: 0
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | exitmsg: OK
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | cpuconsumptiontime: 70849 s
[2025-10-12 23:29:43] 2025-10-13 03:28:52,233 | INFO     | nevents: 400
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | neventsw: 0
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | pid: 2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | pgrp: 2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | corecount: 9
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | event service: False
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | sizes: {0: 2348629, 1: 2348685, 2: 2348741, 3: 2348940, 14: 2348940, 25: 2348968, 37: 2349124, 39: 2349414, 47: 2349442, 38372: 2389183, 38379: 2398181, 38380: 239
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | --------------------------------------------------
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | 
[2025-10-12 23:29:43] 2025-10-13 03:28:52,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 23:29:43] 2025-10-13 03:28:52,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:29:43] 2025-10-13 03:28:52,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,342 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:29:43] 2025-10-13 03:28:52,343 | INFO     | job 6838990455 has completed (purged errors)
[2025-10-12 23:29:43] 2025-10-13 03:28:52,343 | INFO     | overall cleanup function is called
[2025-10-12 23:29:43] 2025-10-13 03:28:53,368 | INFO     | --- collectZombieJob: --- 10, [2127916]
[2025-10-12 23:29:43] 2025-10-13 03:28:53,368 | INFO     | zombie collector waiting for pid 2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:53,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:29:43] 2025-10-13 03:28:53,369 | INFO     | collected zombie processes
[2025-10-12 23:29:43] 2025-10-13 03:28:53,369 | INFO     | will attempt to kill all subprocesses of pid=2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:56,488 | INFO     | PID=2097177 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:29:43] 2025-10-13 03:28:56,488 | INFO     | .. there are 64 such processes running
[2025-10-12 23:29:43] 2025-10-13 03:28:56,593 | INFO     | process IDs to be killed: [2127916] (in reverse order)
[2025-10-12 23:29:43] 2025-10-13 03:28:56,941 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:29:43] 2025-10-13 03:28:56,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:29:43] 2025-10-13 03:28:57,035 | INFO     | did not find any defunct processes belonging to 2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:57,165 | INFO     | did not find any defunct processes belonging to 2127916
[2025-10-12 23:29:43] 2025-10-13 03:28:57,180 | INFO     | ready for new job
[2025-10-12 23:29:43] 2025-10-13 03:28:57,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:29:43] 2025-10-13 03:28:57,200 | INFO     | ***************************************
[2025-10-12 23:29:43] 2025-10-13 03:28:57,201 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:29:43] 2025-10-13 03:28:57,201 | INFO     | ***************************************
[2025-10-12 23:29:43] 2025-10-13 03:28:57,201 | INFO     | 
[2025-10-12 23:29:43] 2025-10-13 03:28:57,222 | INFO     | architecture information:
[2025-10-12 23:29:43] 2025-10-13 03:28:57,238 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:29:43] 2025-10-13 03:28:57,359 | INFO     | cat /etc/os-release:
[2025-10-12 23:29:43] NAME="CentOS Linux"
[2025-10-12 23:29:43] VERSION="7 (Core)"
[2025-10-12 23:29:43] ID="centos"
[2025-10-12 23:29:43] ID_LIKE="rhel fedora"
[2025-10-12 23:29:43] VERSION_ID="7"
[2025-10-12 23:29:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:29:43] ANSI_COLOR="0;31"
[2025-10-12 23:29:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:29:43] HOME_URL="https://www.centos.org/"
[2025-10-12 23:29:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:29:43] 
[2025-10-12 23:29:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:29:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:29:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:29:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:29:43] 
[2025-10-12 23:29:43] 2025-10-13 03:28:57,360 | INFO     | ***************************************
[2025-10-12 23:29:43] 2025-10-13 03:28:57,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 23:29:43] 2025-10-13 03:28:57,987 | INFO     | sufficient remaining disk space (105338896384 B)
[2025-10-12 23:29:43] 2025-10-13 03:28:57,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:29:43] 2025-10-13 03:28:57,988 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:29:43] 2025-10-13 03:28:57,988 | INFO     | update_server=False
[2025-10-12 23:29:43] 2025-10-13 03:28:57,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:29:43] 2025-10-13 03:28:57,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:29:43] 2025-10-13 03:28:57,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:29:43] 2025-10-13 03:28:57,994 | INFO     | aborting loop
[2025-10-12 23:29:43] 2025-10-13 03:28:58,327 | INFO     | all payload control threads have been joined
[2025-10-12 23:29:43] 2025-10-13 03:28:58,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:29:43] 2025-10-13 03:28:58,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:29:43] 2025-10-13 03:28:58,850 | INFO     | all data control threads have been joined
[2025-10-12 23:29:43] 2025-10-13 03:28:58,995 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:58,996 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,000 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,112 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,144 | INFO     | all job control threads have been joined
[2025-10-12 23:29:43] 2025-10-13 03:28:59,332 | INFO     | [payload] control thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,580 | INFO     | [job] validate thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,591 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,856 | INFO     | [data] control thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:28:59,891 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:00,152 | INFO     | [job] control thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:00,201 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:00,376 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:00,468 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:00,469 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:02,694 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:29:43] 2025-10-13 03:29:29,726 | INFO     | PID=2097177 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:29:43] 2025-10-13 03:29:29,726 | INFO     | .. there are 64 such processes running
[2025-10-12 23:29:43] 2025-10-13 03:29:29,727 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:29:43] 2025-10-13 03:29:29,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:29:43] 2025-10-13 03:29:29,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:29:43] 2025-10-13 03:29:36,270 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:29:43] 2025-10-13 03:29:36,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237310232384)>', '<ExcThread(monitor, started 140236512290560)>']
[2025-10-12 23:29:43] 2025-10-13 03:29:36,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:29:43] 2025-10-13 03:29:36,770 | INFO     | [monitor] control thread has ended
[2025-10-12 23:29:43] 2025-10-13 03:29:41,741 | INFO     | all workflow threads have been joined
[2025-10-12 23:29:43] 2025-10-13 03:29:41,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:29:43] 2025-10-13 03:29:41,742 | INFO     | traces error code: 0
[2025-10-12 23:29:43] 2025-10-13 03:29:41,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:29:43] 2025-10-13 03:29:41,968 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:29:43] 2025-10-13 03:29:41,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:29:43] 2025-10-13 03:29:41,976 [wrapper] pilotpid: 2097177
[2025-10-12 23:29:43] 2025-10-13 03:29:41,980 [wrapper] Pilot exit status: 0
[2025-10-12 23:29:43] 2025-10-13 03:29:42,076 [wrapper] pandaids: 6838990455 6838990455 6838990455
[2025-10-12 23:29:43] 2025-10-13 03:29:42,468 [wrapper] cleanup supervisor_pilot  284029 2097179
[2025-10-12 23:29:43] 2025-10-13 03:29:42,551 [wrapper] Test setup, not cleaning
[2025-10-12 23:29:43] 2025-10-13 03:29:42,562 [wrapper] apfmon messages muted
[2025-10-12 23:29:43] 2025-10-13 03:29:42,600 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:29:43] 2025-10-13 03:29:42,626 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:29:43]  *** Error codes and diagnostics ***
[2025-10-12 23:29:43]     "exeErrorCode": 0,
[2025-10-12 23:29:43]     "exeErrorDiag": "",
[2025-10-12 23:29:43]     "pilotErrorCode": 0,
[2025-10-12 23:29:43]     "pilotErrorDiag": "",
[2025-10-12 23:29:43]  *** Listing of results directory ***
[2025-10-12 23:29:43] total 629040
[2025-10-12 23:29:43] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:20 queuedata.json
[2025-10-12 23:29:43] -rwx------. 1 boincer umatlas     36292 Oct 11 18:20 runpilot2-wrapper.sh
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:29:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:31 run_atlas
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:31 job.xml
[2025-10-12 23:29:43] -rw-r--r--. 3 boincer umatlas 221322723 Oct 11 21:31 EVNT.46676267._002657.pool.root.1
[2025-10-12 23:29:43] -rw-r--r--. 3 boincer umatlas 221322723 Oct 11 21:31 ATLAS.root_0
[2025-10-12 23:29:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:31 start_atlas.sh
[2025-10-12 23:29:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:31 shared
[2025-10-12 23:29:43] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:31 input.tar.gz
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:31 boinc_lockfile
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 12:46 pandaJob.out
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas    975528 Oct 12 12:47 agis_schedconf.cvmfs.json
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 23:20 init_data.xml
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas 189081394 Oct 12 23:27 HITS.46676269._066108.pool.root.1
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas       532 Oct 12 23:27 boinc_task_state.xml
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas      1043 Oct 12 23:28 memory_monitor_summary.json
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas    707914 Oct 12 23:28 log.46676269._066108.job.log.tgz.1
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas      7817 Oct 12 23:28 heartbeat.json
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas        97 Oct 12 23:29 pilot_heartbeat.json
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:29 boinc_mmap_file
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas        29 Oct 12 23:29 wrapper_checkpoint.txt
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas      4825 Oct 12 23:29 pilotlog.txt
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas   3545800 Oct 12 23:29 log.46676269._066108.job.log.1
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas       357 Oct 12 23:29 output.list
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:29 runtime_log
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas   4270080 Oct 12 23:29 result.tar.gz
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas       904 Oct 12 23:29 UYhLDmw7wR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmshSMDmfEIVSm.diag
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas      8774 Oct 12 23:29 runtime_log.err
[2025-10-12 23:29:43] -rw-r--r--. 1 boincer umatlas     25905 Oct 12 23:29 stderr.txt
[2025-10-12 23:29:43] HITS file was successfully produced:
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas 189081394 Oct 12 23:27 shared/HITS.pool.root.1
[2025-10-12 23:29:43]  *** Contents of shared directory: ***
[2025-10-12 23:29:43] total 405540
[2025-10-12 23:29:43] -rw-r--r--. 3 boincer umatlas 221322723 Oct 11 21:31 ATLAS.root_0
[2025-10-12 23:29:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:31 start_atlas.sh
[2025-10-12 23:29:43] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:31 input.tar.gz
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas 189081394 Oct 12 23:27 HITS.pool.root.1
[2025-10-12 23:29:43] -rw-------. 1 boincer umatlas   4270080 Oct 12 23:29 result.tar.gz
23:29:44 (2081617): run_atlas exited; CPU time 73599.179079
23:29:44 (2081617): called boinc_finish(0)

</stderr_txt>
]]>

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