Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:37:55 (2628): wrapper (7.7.26015): starting
20:37:55 (2628): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:37:55] Arguments: --nthreads 4
[2025-10-11 20:37:55] Threads: 4
[2025-10-11 20:37:55] Checking for CVMFS
[2025-10-11 20:37:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:37:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:37:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:37:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:37:56] 2.11.2.0 2433 38075 66640 151601 0 58 12149736 20275201 1 130560 0 17784715 99.988 1226643 54464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 20:37:56] CVMFS is ok
[2025-10-11 20:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:37:56] Further information can be found at the LHC@home message board.
[2025-10-11 20:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:37:56] Checking for apptainer binary...
[2025-10-11 20:37:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:37:56] Running /usr/bin/apptainer --version
[2025-10-11 20:37:56] apptainer version 1.3.2-1.el7
[2025-10-11 20:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:37:56] c-205-33.aglt2.org
[2025-10-11 20:37:56] apptainer works
[2025-10-11 20:37:56] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:37:56] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:37:56] Starting ATLAS job with PandaID=6838990386
[2025-10-11 20:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:17:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:17:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 22:17:21]  replicas=None
[2025-10-11 22:17:21]  scope=mc23_13p6TeV
[2025-10-11 22:17:21]  status=None
[2025-10-11 22:17:21]  status_code=0
[2025-10-11 22:17:21]  storage_token=
[2025-10-11 22:17:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838990386/log.46676269._066039.job.log.tgz.1
[2025-10-11 22:17:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/8c/log.46676269._066039.job.log.tgz.1
[2025-10-11 22:17:21]  workdir=None
[2025-10-11 22:17:21] ]
[2025-10-11 22:17:21] 2025-10-12 02:16:39,631 | INFO     | transferring file log.46676269._066039.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838990386/log.46676269._066039.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 22:17:21] 2025-10-12 02:16:39,631 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838990386/log.46676269._066039.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._066039.job
[2025-10-11 22:17:21] 2025-10-12 02:16:39,642 | INFO     | adding to output.list: log.46676269._066039.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/8c/log.46676269._066039.job.log.tg
[2025-10-11 22:17:21] 2025-10-12 02:16:39,642 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 22:17:21] 2025-10-12 02:16:39,642 | INFO     | summary of transferred files:
[2025-10-11 22:17:21] 2025-10-12 02:16:39,643 | INFO     |  -- lfn=log.46676269._066039.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 22:17:21] 2025-10-12 02:16:39,643 | INFO     | stage-out finished correctly
[2025-10-11 22:17:21] 2025-10-12 02:16:40,472 | INFO     | time since job start (5915s) is within the limit (172800.0s)
[2025-10-11 22:17:21] 2025-10-12 02:16:41,750 | WARNING  | process 12668 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 22:17:21] 2025-10-12 02:16:41,751 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838990386/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:17:21] 2025-10-12 02:16:41,778 | INFO     | number of running child processes to parent process 12668: 1
[2025-10-11 22:17:21] 2025-10-12 02:16:41,778 | INFO     | maximum number of monitored processes: 6
[2025-10-11 22:17:21] 2025-10-12 02:16:41,851 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 22:17:21] 2025-10-12 02:16:42,061 | INFO     | job 6838990386 has state=finished
[2025-10-11 22:17:21] 2025-10-12 02:16:42,062 | INFO     | preparing for final server update for job 6838990386 in state='finished'
[2025-10-11 22:17:21] 2025-10-12 02:16:42,062 | INFO     | this job has now completed (state=finished)
[2025-10-11 22:17:21] 2025-10-12 02:16:42,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 22:17:21] 2025-10-12 02:16:42,063 | INFO     | log transfer has been attempted: DONE
[2025-10-11 22:17:21] 2025-10-12 02:16:42,063 | INFO     | job 6838990386 has finished - writing final server update
[2025-10-11 22:17:21] 2025-10-12 02:16:42,063 | INFO     | total number of processed events: 400 (read)
[2025-10-11 22:17:21] 2025-10-12 02:16:42,065 | INFO     | executing command: lscpu
[2025-10-11 22:17:21] 2025-10-12 02:16:42,095 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 22:17:21] 2025-10-12 02:16:42,478 | INFO     | time since job start (5917s) is within the limit (172800.0s)
[2025-10-11 22:17:21] 2025-10-12 02:16:44,279 | INFO     | monitor loop #444: job 0:6838990386 is in state 'finished'
[2025-10-11 22:17:21] 2025-10-12 02:16:44,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:17:21] 2025-10-12 02:16:44,482 | INFO     | time since job start (5919s) is within the limit (172800.0s)
[2025-10-11 22:17:21] 2025-10-12 02:16:45,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 22:17:21] 2025-10-12 02:16:45,763 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 2313.7690000000002
[2025-10-11 22:17:21] 2025-10-12 02:16:45,764 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838990386/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:17:21] 2025-10-12 02:16:45,764 | INFO     | extracted standard info from prmon json
[2025-10-11 22:17:21] 2025-10-12 02:16:45,764 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:17:21] 2025-10-12 02:16:45,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:17:21] 2025-10-12 02:16:45,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:17:21] 2025-10-12 02:16:45,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:17:21] 2025-10-12 02:16:45,766 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:17:21] 2025-10-12 02:16:45,766 | INFO     | sum of square deviations: 226022842.5
[2025-10-11 22:17:21] 2025-10-12 02:16:45,766 | INFO     | sum of deviations: -16017638274.0
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | mean x: 1760232525.5
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | mean y: 2461254.644444444
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | -- intersect: 124745463155.38586
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | intersect: 124745463155.38586
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | chi2: 0.08751939069802836
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | -- intersect: 124745463155.38586
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | current memory leak: -70.87 B/s (using 90 data points, chi2=0.09)
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | could have reported an average CPU frequency of 2802 MHz (7 samples)
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | ..............................
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | . Timing measurements:
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | . get job = 0 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,767 | INFO     | . initial setup = 2 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | . payload setup = 3 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | . stage-in = 0 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | . payload execution = 5893 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | . stage-out = 0 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | . log creation = 0 s
[2025-10-11 22:17:21] 2025-10-12 02:16:45,768 | INFO     | ..............................
[2025-10-11 22:17:21] 2025-10-12 02:16:46,237 | INFO     | 
[2025-10-11 22:17:21] 2025-10-12 02:16:46,237 | INFO     | job summary report
[2025-10-11 22:17:21] 2025-10-12 02:16:46,237 | INFO     | --------------------------------------------------
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | PanDA job id: 6838990386
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | task id: 46676269
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | errors: (none)
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | pilot state: finished 
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | transexitcode: 0
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | exeerrorcode: 0
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | exeerrordiag: 
[2025-10-11 22:17:21] 2025-10-12 02:16:46,238 | INFO     | exitcode: 0
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | exitmsg: OK
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | cpuconsumptiontime: 22695 s
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | nevents: 400
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | neventsw: 0
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | pid: 12668
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | pgrp: 12668
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | corecount: 4
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | event service: False
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5899: 2376011, 5900: 2385009, 5902: 2385065, 5906: 2385387}
[2025-10-11 22:17:21] 2025-10-12 02:16:46,239 | INFO     | --------------------------------------------------
[2025-10-11 22:17:21] 2025-10-12 02:16:46,240 | INFO     | 
[2025-10-11 22:17:21] 2025-10-12 02:16:46,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 22:17:21] 2025-10-12 02:16:46,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:17:21] 2025-10-12 02:16:46,253 | INFO     | job 6838990386 has completed (purged errors)
[2025-10-11 22:17:21] 2025-10-12 02:16:46,253 | INFO     | overall cleanup function is called
[2025-10-11 22:17:21] 2025-10-12 02:16:47,255 | INFO     | --- collectZombieJob: --- 10, [12668]
[2025-10-11 22:17:21] 2025-10-12 02:16:47,255 | INFO     | zombie collector waiting for pid 12668
[2025-10-11 22:17:21] 2025-10-12 02:16:47,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:17:21] 2025-10-12 02:16:47,256 | INFO     | collected zombie processes
[2025-10-11 22:17:21] 2025-10-12 02:16:47,256 | INFO     | will attempt to kill all subprocesses of pid=12668
[2025-10-11 22:17:21] 2025-10-12 02:16:47,288 | INFO     | process IDs to be killed: [12668] (in reverse order)
[2025-10-11 22:17:21] 2025-10-12 02:16:47,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:17:21] 2025-10-12 02:16:47,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:17:21] 2025-10-12 02:16:47,376 | INFO     | did not find any defunct processes belonging to 12668
[2025-10-11 22:17:21] 2025-10-12 02:16:47,377 | INFO     | did not find any defunct processes belonging to 12668
[2025-10-11 22:17:21] 2025-10-12 02:16:47,377 | INFO     | ready for new job
[2025-10-11 22:17:21] 2025-10-12 02:16:47,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | ***************************************
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | ***************************************
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | 
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | architecture information:
[2025-10-11 22:17:21] 2025-10-12 02:16:47,378 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:17:21] 2025-10-12 02:16:47,386 | INFO     | cat /etc/os-release:
[2025-10-11 22:17:21] NAME="CentOS Linux"
[2025-10-11 22:17:21] VERSION="7 (Core)"
[2025-10-11 22:17:21] ID="centos"
[2025-10-11 22:17:21] ID_LIKE="rhel fedora"
[2025-10-11 22:17:21] VERSION_ID="7"
[2025-10-11 22:17:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:17:21] ANSI_COLOR="0;31"
[2025-10-11 22:17:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:17:21] HOME_URL="https://www.centos.org/"
[2025-10-11 22:17:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:17:21] 
[2025-10-11 22:17:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:17:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:17:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:17:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:17:21] 
[2025-10-11 22:17:21] 2025-10-12 02:16:47,386 | INFO     | ***************************************
[2025-10-11 22:17:21] 2025-10-12 02:16:47,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 22:17:21] 2025-10-12 02:16:47,913 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-11 22:17:21] 2025-10-12 02:16:47,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:17:21] 2025-10-12 02:16:47,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:17:21] 2025-10-12 02:16:47,915 | INFO     | update_server=False
[2025-10-11 22:17:21] 2025-10-12 02:16:47,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:17:21] 2025-10-12 02:16:47,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:17:21] 2025-10-12 02:16:47,916 | INFO     | aborting loop
[2025-10-11 22:17:21] 2025-10-12 02:16:47,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:17:21] 2025-10-12 02:16:47,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:17:21] 2025-10-12 02:16:48,020 | INFO     | all job control threads have been joined
[2025-10-11 22:17:21] 2025-10-12 02:16:48,059 | INFO     | all data control threads have been joined
[2025-10-11 22:17:21] 2025-10-12 02:16:48,131 | INFO     | all payload control threads have been joined
[2025-10-11 22:17:21] 2025-10-12 02:16:48,921 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:48,922 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,022 | INFO     | [job] control thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,036 | INFO     | [job] validate thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,065 | INFO     | [data] control thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,083 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,134 | INFO     | [payload] control thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,197 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,731 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,901 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:49,922 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:50,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:17:21] 2025-10-12 02:16:51,826 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:51,923 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:16:58,636 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:17:21] 2025-10-12 02:16:59,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:17:21] 2025-10-12 02:17:15,104 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:17:21] 2025-10-12 02:17:16,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041464489792)>', '<ExcThread(monitor, started 140040428582656)>']
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | INFO     | PID=6317 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:17:21] 2025-10-12 02:17:17,615 | INFO     | [monitor] control thread has ended
[2025-10-11 22:17:21] 2025-10-12 02:17:21,208 | INFO     | all workflow threads have been joined
[2025-10-11 22:17:21] 2025-10-12 02:17:21,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:17:21] 2025-10-12 02:17:21,209 | INFO     | traces error code: 0
[2025-10-11 22:17:21] 2025-10-12 02:17:21,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:17:21] 2025-10-12 02:17:21,273 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:17:21] 2025-10-12 02:17:21,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:17:21] 2025-10-12 02:17:21,277 [wrapper] pilotpid: 6317
[2025-10-11 22:17:21] 2025-10-12 02:17:21,279 [wrapper] Pilot exit status: 0
[2025-10-11 22:17:21] 2025-10-12 02:17:21,284 [wrapper] pandaids: 6838990386
[2025-10-11 22:17:21] 2025-10-12 02:17:21,298 [wrapper] cleanup supervisor_pilot 11442 6318
[2025-10-11 22:17:21] 2025-10-12 02:17:21,300 [wrapper] Test setup, not cleaning
[2025-10-11 22:17:21] 2025-10-12 02:17:21,302 [wrapper] apfmon messages muted
[2025-10-11 22:17:21] 2025-10-12 02:17:21,304 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:17:21] 2025-10-12 02:17:21,305 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:17:21]  *** Error codes and diagnostics ***
[2025-10-11 22:17:21]     "exeErrorCode": 0,
[2025-10-11 22:17:21]     "exeErrorDiag": "",
[2025-10-11 22:17:21]     "pilotErrorCode": 0,
[2025-10-11 22:17:21]     "pilotErrorDiag": "",
[2025-10-11 22:17:21]  *** Listing of results directory ***
[2025-10-11 22:17:21] total 407180
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 18:20 queuedata.json
[2025-10-11 22:17:21] -rwx------ 1 boincer umatlas     36292 Oct 11 18:20 runpilot2-wrapper.sh
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas       100 Oct 11 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:17:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 20:37 run_atlas
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas       105 Oct 11 20:37 job.xml
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas 220698080 Oct 11 20:37 EVNT.46676267._002655.pool.root.1
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:37 start_atlas.sh
[2025-10-11 22:17:21] drwxrwx--x 2 boincer umatlas      4096 Oct 11 20:37 shared
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 20:37 input.tar.gz
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas         0 Oct 11 20:37 boinc_lockfile
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 20:37 pandaJob.out
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas    975496 Oct 11 20:38 agis_schedconf.cvmfs.json
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas   1560580 Oct 11 20:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:17:21] drwx------ 5 boincer umatlas      4096 Oct 11 20:38 pilot3
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas      6239 Oct 11 22:12 init_data.xml
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas 190092839 Oct 11 22:16 HITS.46676269._066039.pool.root.1
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas       529 Oct 11 22:16 boinc_task_state.xml
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas      1044 Oct 11 22:16 memory_monitor_summary.json
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas    276866 Oct 11 22:16 log.46676269._066039.job.log.tgz.1
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas      7834 Oct 11 22:16 heartbeat.json
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas        95 Oct 11 22:17 pilot_heartbeat.json
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 22:17 boinc_mmap_file
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas        27 Oct 11 22:17 wrapper_checkpoint.txt
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas      4817 Oct 11 22:17 pilotlog.txt
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas    850476 Oct 11 22:17 log.46676269._066039.job.log.1
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas       357 Oct 11 22:17 output.list
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas       620 Oct 11 22:17 runtime_log
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas   1146880 Oct 11 22:17 result.tar.gz
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 22:17 runtime_log.err
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas       656 Oct 11 22:17 h5ZLDm17wR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxnhNDmRNfI6m.diag
[2025-10-11 22:17:21] -rw-r--r-- 1 boincer umatlas     21836 Oct 11 22:17 stderr.txt
[2025-10-11 22:17:21] HITS file was successfully produced:
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas 190092839 Oct 11 22:16 shared/HITS.pool.root.1
[2025-10-11 22:17:21]  *** Contents of shared directory: ***
[2025-10-11 22:17:21] total 402872
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas 220698080 Oct 11 20:37 ATLAS.root_0
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:37 start_atlas.sh
[2025-10-11 22:17:21] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 20:37 input.tar.gz
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas 190092839 Oct 11 22:16 HITS.pool.root.1
[2025-10-11 22:17:21] -rw------- 1 boincer umatlas   1146880 Oct 11 22:17 result.tar.gz
22:17:23 (2628): run_atlas exited; CPU time 22714.689395
22:17:23 (2628): called boinc_finish(0)

</stderr_txt>
]]>

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