Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:12 (1509363): wrapper (7.7.26015): starting
16:26:12 (1509363): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 16:26:12] Arguments: --nthreads 6
[2025-10-12 16:26:12] Threads: 6
[2025-10-12 16:26:12] Checking for CVMFS
[2025-10-12 16:26:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:26:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:26:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:26:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:26:13] 2.11.5.0 3102357 3520 85372 151612 2 188 42681904 52428800 929 130560 0 8128834 99.997 123248 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 16:26:13] CVMFS is ok
[2025-10-12 16:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:26:13] Checking for apptainer binary...
[2025-10-12 16:26:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:26:13] Running /usr/bin/apptainer --version
[2025-10-12 16:26:13] apptainer version 1.3.6-1.el9
[2025-10-12 16:26:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:26:13] testio002
[2025-10-12 16:26:13] apptainer works
[2025-10-12 16:26:13] Set ATHENA_PROC_NUMBER=6
[2025-10-12 16:26:13] Set ATHENA_CORE_NUMBER=6
[2025-10-12 16:26:13] Starting ATLAS job with PandaID=6838634024
[2025-10-12 16:26:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:33:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:33:33]  status=None
[2025-10-12 17:33:33]  status_code=0
[2025-10-12 17:33:33]  storage_token=
[2025-10-12 17:33:33]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6838634024/log.46676269._061544.job.log.tgz.1
[2025-10-12 17:33:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/cc/log.46676269._061544.job.log.tgz.1
[2025-10-12 17:33:33]  workdir=None
[2025-10-12 17:33:33] ]
[2025-10-12 17:33:33] 2025-10-12 08:32:56,333 | INFO     | transferring file log.46676269._061544.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6838634024/log.46676269._061544.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 17:33:33] 2025-10-12 08:32:56,333 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6838634024/log.46676269._061544.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._061544.job
[2025-10-12 17:33:33] 2025-10-12 08:32:56,339 | INFO     | adding to output.list: log.46676269._061544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/cc/log.46676269._061544.job.log.tg
[2025-10-12 17:33:33] 2025-10-12 08:32:56,339 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:33:33] 2025-10-12 08:32:56,339 | INFO     | summary of transferred files:
[2025-10-12 17:33:33] 2025-10-12 08:32:56,339 | INFO     |  -- lfn=log.46676269._061544.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:33:33] 2025-10-12 08:32:56,339 | INFO     | stage-out finished correctly
[2025-10-12 17:33:33] 2025-10-12 08:32:56,493 | WARNING  | process 1519942 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 17:33:33] 2025-10-12 08:32:56,493 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6838634024/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:33:33] 2025-10-12 08:32:56,524 | INFO     | number of running child processes to parent process 1519942: 1
[2025-10-12 17:33:33] 2025-10-12 08:32:56,524 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:33:33] 2025-10-12 08:32:56,645 | INFO     | time since job start (3995s) is within the limit (172800.0s)
[2025-10-12 17:33:33] 2025-10-12 08:32:57,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:33:33] 2025-10-12 08:32:57,319 | INFO     | job 6838634024 has state=finished
[2025-10-12 17:33:33] 2025-10-12 08:32:57,320 | INFO     | preparing for final server update for job 6838634024 in state='finished'
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | job 6838634024 has finished - writing final server update
[2025-10-12 17:33:33] 2025-10-12 08:32:58,250 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:33:33] 2025-10-12 08:32:58,251 | INFO     | executing command: lscpu
[2025-10-12 17:33:33] 2025-10-12 08:32:58,258 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:33:33] 2025-10-12 08:32:58,650 | INFO     | time since job start (3997s) is within the limit (172800.0s)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,026 | INFO     | monitor loop #303: job 0:6838634024 is in state 'finished'
[2025-10-12 17:33:33] 2025-10-12 08:32:59,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,627 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 17:33:33] 2025-10-12 08:32:59,629 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4421.7430625
[2025-10-12 17:33:33] 2025-10-12 08:32:59,630 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6838634024/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,631 | INFO     | extracted standard info from prmon json
[2025-10-12 17:33:33] 2025-10-12 08:32:59,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:33:33] 2025-10-12 08:32:59,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:33:33] 2025-10-12 08:32:59,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:33:33] 2025-10-12 08:32:59,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | sum of square deviations: 63666310.0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | sum of deviations: -3904464209.9999995
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | mean x: 1760256074.0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | mean y: 2561131.0169491526
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | -- intersect: 107953796900.2662
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | intersect: 107953796900.2662
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | chi2: 0.045202564567150966
[2025-10-12 17:33:33] 2025-10-12 08:32:59,632 | INFO     | -- intersect: 107953796900.2662
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | current memory leak: -61.33 B/s (using 59 data points, chi2=0.05)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | could have reported an average CPU frequency of 4261 MHz (6 samples)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | ..............................
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . Timing measurements:
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . get job = 0 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . initial setup = 4 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . payload setup = 2 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . stage-in = 0 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . payload execution = 3975 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . stage-out = 0 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | . log creation = 0 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,633 | INFO     | ..............................
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | 
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | job summary report
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | --------------------------------------------------
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | PanDA job id: 6838634024
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | task id: 46676269
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | errors: (none)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | pilot state: finished 
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | transexitcode: 0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,661 | INFO     | exeerrorcode: 0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | exeerrordiag: 
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | exitcode: 0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | exitmsg: OK
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | cpuconsumptiontime: 21659 s
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | nevents: 400
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | neventsw: 0
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | pid: 1519942
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | pgrp: 1519942
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | corecount: 6
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | event service: False
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | sizes: {0: 2348686, 1: 2348885, 3: 2349147, 11: 2349175, 3981: 2375095, 3982: 2384093, 3983: 2384277, 3985: 2384471}
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | --------------------------------------------------
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | 
[2025-10-12 17:33:33] 2025-10-12 08:32:59,662 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | job 6838634024 has completed (purged errors)
[2025-10-12 17:33:33] 2025-10-12 08:32:59,668 | INFO     | overall cleanup function is called
[2025-10-12 17:33:33] 2025-10-12 08:33:00,674 | INFO     | --- collectZombieJob: --- 10, [1519942]
[2025-10-12 17:33:33] 2025-10-12 08:33:00,674 | INFO     | zombie collector waiting for pid 1519942
[2025-10-12 17:33:33] 2025-10-12 08:33:00,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:33:33] 2025-10-12 08:33:00,674 | INFO     | collected zombie processes
[2025-10-12 17:33:33] 2025-10-12 08:33:00,674 | INFO     | will attempt to kill all subprocesses of pid=1519942
[2025-10-12 17:33:33] 2025-10-12 08:33:00,705 | INFO     | process IDs to be killed: [1519942] (in reverse order)
[2025-10-12 17:33:33] 2025-10-12 08:33:00,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:33:33] 2025-10-12 08:33:00,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:33:33] 2025-10-12 08:33:00,720 | INFO     | did not find any defunct processes belonging to 1519942
[2025-10-12 17:33:33] 2025-10-12 08:33:00,721 | INFO     | did not find any defunct processes belonging to 1519942
[2025-10-12 17:33:33] 2025-10-12 08:33:00,721 | INFO     | ready for new job
[2025-10-12 17:33:33] 2025-10-12 08:33:00,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:33:33] 2025-10-12 08:33:00,721 | INFO     | ***************************************
[2025-10-12 17:33:33] 2025-10-12 08:33:00,722 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:33:33] 2025-10-12 08:33:00,722 | INFO     | ***************************************
[2025-10-12 17:33:33] 2025-10-12 08:33:00,722 | INFO     | 
[2025-10-12 17:33:33] 2025-10-12 08:33:00,722 | INFO     | architecture information:
[2025-10-12 17:33:33] 2025-10-12 08:33:00,722 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:33:33] 2025-10-12 08:33:00,726 | INFO     | cat /etc/os-release:
[2025-10-12 17:33:33] NAME="CentOS Linux"
[2025-10-12 17:33:33] VERSION="7 (Core)"
[2025-10-12 17:33:33] ID="centos"
[2025-10-12 17:33:33] ID_LIKE="rhel fedora"
[2025-10-12 17:33:33] VERSION_ID="7"
[2025-10-12 17:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:33:33] ANSI_COLOR="0;31"
[2025-10-12 17:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:33:33] HOME_URL="https://www.centos.org/"
[2025-10-12 17:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:33:33] 
[2025-10-12 17:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:33:33] 
[2025-10-12 17:33:33] 2025-10-12 08:33:00,727 | INFO     | ***************************************
[2025-10-12 17:33:33] 2025-10-12 08:33:01,229 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | INFO     | sufficient remaining disk space (301492862976 B)
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | INFO     | update_server=False
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:33:33] 2025-10-12 08:33:01,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:33:33] 2025-10-12 08:33:01,529 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:33:33] 2025-10-12 08:33:01,529 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:33:33] 2025-10-12 08:33:01,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:33:33] 2025-10-12 08:33:01,529 | INFO     | will abort loop
[2025-10-12 17:33:33] 2025-10-12 08:33:01,850 | INFO     | all payload control threads have been joined
[2025-10-12 17:33:33] 2025-10-12 08:33:01,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:33:33] 2025-10-12 08:33:02,219 | INFO     | all data control threads have been joined
[2025-10-12 17:33:33] 2025-10-12 08:33:02,238 | INFO     | all job control threads have been joined
[2025-10-12 17:33:33] 2025-10-12 08:33:02,240 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,240 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,249 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,494 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,534 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,855 | INFO     | [payload] control thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,862 | INFO     | [job] validate thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:02,922 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,026 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,083 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,221 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,224 | INFO     | [data] control thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,243 | INFO     | [job] control thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:03,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:33:33] 2025-10-12 08:33:03,878 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:07,329 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:12,187 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:33:33] 2025-10-12 08:33:13,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:33:33] 2025-10-12 08:33:27,780 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:33:33] 2025-10-12 08:33:28,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707480872768)>', '<ExcThread(monitor, started 139706620700416)>']
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | INFO     | PID=1513163 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | INFO     | .. there are 2 such processes running
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:33:33] 2025-10-12 08:33:31,788 | INFO     | [monitor] control thread has ended
[2025-10-12 17:33:33] 2025-10-12 08:33:33,078 | INFO     | all workflow threads have been joined
[2025-10-12 17:33:33] 2025-10-12 08:33:33,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:33:33] 2025-10-12 08:33:33,078 | INFO     | traces error code: 0
[2025-10-12 17:33:33] 2025-10-12 08:33:33,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:33:33] 2025-10-12 08:33:33,150 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:33:33] 2025-10-12 08:33:33,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:33:33] 2025-10-12 08:33:33,151 [wrapper] pilotpid: 1513163
[2025-10-12 17:33:33] 2025-10-12 08:33:33,153 [wrapper] Pilot exit status: 0
[2025-10-12 17:33:33] 2025-10-12 08:33:33,157 [wrapper] pandaids: 6838634024
[2025-10-12 17:33:33] 2025-10-12 08:33:33,169 [wrapper] cleanup supervisor_pilot 1534151 1513164
[2025-10-12 17:33:33] 2025-10-12 08:33:33,171 [wrapper] Test setup, not cleaning
[2025-10-12 17:33:33] 2025-10-12 08:33:33,172 [wrapper] apfmon messages muted
[2025-10-12 17:33:33] 2025-10-12 08:33:33,173 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:33:33] 2025-10-12 08:33:33,174 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:33:33]  *** Error codes and diagnostics ***
[2025-10-12 17:33:33]     "exeErrorCode": 0,
[2025-10-12 17:33:33]     "exeErrorDiag": "",
[2025-10-12 17:33:33]     "pilotErrorCode": 0,
[2025-10-12 17:33:33]     "pilotErrorDiag": "",
[2025-10-12 17:33:33]  *** Listing of results directory ***
[2025-10-12 17:33:33] total 410392
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc    557409 Oct 12 02:07 pilot3.tar.gz
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc      5112 Oct 12 02:10 queuedata.json
[2025-10-12 17:33:33] -rwx------. 1 boinc boinc     36292 Oct 12 02:10 runpilot2-wrapper.sh
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:33:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:26 run_atlas
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:26 job.xml
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:26 start_atlas.sh
[2025-10-12 17:33:33] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:26 shared
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:26 input.tar.gz
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc      9628 Oct 12 16:26 init_data.xml
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc 222862973 Oct 12 16:26 EVNT.46676267._002471.pool.root.1
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:26 boinc_lockfile
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:26 pandaJob.out
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc    975520 Oct 12 16:26 agis_schedconf.cvmfs.json
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc   1560580 Oct 12 16:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:33:33] drwx------. 5 boinc boinc      4096 Oct 12 16:26 pilot3
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc 191677398 Oct 12 17:32 HITS.46676269._061544.pool.root.1
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc        95 Oct 12 17:32 pilot_heartbeat.json
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc      1028 Oct 12 17:32 memory_monitor_summary.json
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc    297527 Oct 12 17:32 log.46676269._061544.job.log.tgz.1
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc       529 Oct 12 17:32 boinc_task_state.xml
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc      7797 Oct 12 17:32 heartbeat.json
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc      8192 Oct 12 17:33 boinc_mmap_file
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc        27 Oct 12 17:33 wrapper_checkpoint.txt
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc      5082 Oct 12 17:33 pilotlog.txt
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc    606521 Oct 12 17:33 log.46676269._061544.job.log.1
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc       357 Oct 12 17:33 output.list
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc       620 Oct 12 17:33 runtime_log
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc    921600 Oct 12 17:33 result.tar.gz
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc       642 Oct 12 17:33 z2UNDm4HsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN2gNDmzLX0cm.diag
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc      8661 Oct 12 17:33 runtime_log.err
[2025-10-12 17:33:33] -rw-r--r--. 1 boinc boinc     21670 Oct 12 17:33 stderr.txt
[2025-10-12 17:33:33] HITS file was successfully produced:
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc 191677398 Oct 12 17:32 shared/HITS.pool.root.1
[2025-10-12 17:33:33]  *** Contents of shared directory: ***
[2025-10-12 17:33:33] total 406304
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:26 start_atlas.sh
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:26 input.tar.gz
[2025-10-12 17:33:33] -rw-r--r--. 2 boinc boinc 222862973 Oct 12 16:26 ATLAS.root_0
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc 191677398 Oct 12 17:32 HITS.pool.root.1
[2025-10-12 17:33:33] -rw-------. 1 boinc boinc    921600 Oct 12 17:33 result.tar.gz
17:33:34 (1509363): run_atlas exited; CPU time 21683.701760
17:33:34 (1509363): called boinc_finish(0)

</stderr_txt>
]]>

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