Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:44:11 (4075473): wrapper (7.7.26015): starting
17:44:11 (4075473): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:44:12] Arguments: --nthreads 8
[2025-10-11 17:44:12] Threads: 8
[2025-10-11 17:44:12] Checking for CVMFS
[2025-10-11 17:44:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:44:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:44:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:44:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:44:13] 2.11.3.0 1859 29216 204164 151601 3 463 32073628 45568000 20047 130560 0 185478316 99.844 85711513 19435 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-11 17:44:13] CVMFS is ok
[2025-10-11 17:44:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:44:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:44:13] Further information can be found at the LHC@home message board.
[2025-10-11 17:44:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:44:13] Checking for apptainer binary...
[2025-10-11 17:44:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:44:13] Running /usr/bin/apptainer --version
[2025-10-11 17:44:13] apptainer version 1.4.1-1.el9
[2025-10-11 17:44:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:44:13] wns0005.triumf.lcg
[2025-10-11 17:44:13] apptainer works
[2025-10-11 17:44:13] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:44:13] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:44:13] Starting ATLAS job with PandaID=6838990361
[2025-10-11 17:44:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:49:50]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:49:50] 2025-10-12 00:49:16,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . Timing measurements:
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . get job = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . initial setup = 4 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload setup = 18 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . stage-in = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload execution = 84 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . stage-out = 1 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . log creation = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990361/pilotlog.txt
[2025-10-11 17:49:50] 2025-10-12 00:49:16,347 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 17:49:50] - Log from pilotlog.txt -
[2025-10-11 17:49:50] 2025-10-12 00:49:16,231 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838990361/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | INFO     | extracted standard info from prmon json
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | wrong length of table data, x=[1760229955.0], y=[1033.0] (must be same and length>=4)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . Timing measurements:
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . get job = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . initial setup = 4 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload setup = 18 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . stage-in = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload execution = 84 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . stage-out = 1 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . log creation = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990361/pilotlog.txt
[2025-10-11 17:49:50] 2025-10-12 00:49:16,348 | WARNING  | 
[2025-10-11 17:49:50] [begin log extracts]
[2025-10-11 17:49:50] - Log from pilotlog.txt -
[2025-10-11 17:49:50] 2025-10-12 00:49:16,231 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838990361/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | INFO     | extracted standard info from prmon json
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:49:50] 2025-10-12 00:49:16,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:49:50] 2025-10-12 00:49:16,233 | WARNING  | wrong length of table data, x=[1760229955.0], y=[1033.0] (must be same and length>=4)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . Timing measurements:
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . get job = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . initial setup = 4 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload setup = 18 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . stage-in = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,239 | INFO     | . payload execution = 84 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . stage-out = 1 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | . log creation = 0 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | ..............................
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:49:50] 2025-10-12 00:49:16,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838990361/pilotlog.txt
[2025-10-11 17:49:50] [end log extracts]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,348 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,349 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | 
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | job summary report
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | --------------------------------------------------
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | PanDA job id: 6838990361
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | task id: 46676269
[2025-10-11 17:49:50] 2025-10-12 00:49:16,578 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 17:46:46,111 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | pilot state: failed 
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | transexitcode: 65
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | exeerrorcode: 65
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | exitcode: 65
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | nevents: 0
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | neventsw: 0
[2025-10-11 17:49:50] 2025-10-12 00:49:16,579 | INFO     | pid: 4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | pgrp: 4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | corecount: 8
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | event service: False
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | sizes: {0: 2348627, 1: 2348882, 12: 2348882, 13: 2349172, 23: 2349228, 106: 2372514, 107: 2372618, 108: 2376938, 109: 2376966, 245: 2377160}
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | --------------------------------------------------
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | 
[2025-10-11 17:49:50] 2025-10-12 00:49:16,580 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:49:50] 2025-10-12 00:49:16,714 | INFO     | job 6838990361 has completed (purged errors)
[2025-10-11 17:49:50] 2025-10-12 00:49:16,715 | INFO     | overall cleanup function is called
[2025-10-11 17:49:50] 2025-10-12 00:49:16,718 | INFO     | PID=4079189 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:49:50] 2025-10-12 00:49:16,718 | INFO     | .. there are 33 such processes running
[2025-10-11 17:49:50] 2025-10-12 00:49:17,733 | INFO     | --- collectZombieJob: --- 10, [4085912]
[2025-10-11 17:49:50] 2025-10-12 00:49:17,733 | INFO     | zombie collector waiting for pid 4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:17,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:49:50] 2025-10-12 00:49:17,733 | INFO     | collected zombie processes
[2025-10-11 17:49:50] 2025-10-12 00:49:17,733 | INFO     | will attempt to kill all subprocesses of pid=4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:18,465 | INFO     | process IDs to be killed: [4085912] (in reverse order)
[2025-10-11 17:49:50] 2025-10-12 00:49:18,818 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:49:50] 2025-10-12 00:49:18,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:49:50] 2025-10-12 00:49:18,827 | INFO     | did not find any defunct processes belonging to 4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:18,846 | INFO     | did not find any defunct processes belonging to 4085912
[2025-10-11 17:49:50] 2025-10-12 00:49:18,846 | INFO     | ready for new job
[2025-10-11 17:49:50] 2025-10-12 00:49:18,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:49:50] 2025-10-12 00:49:18,847 | INFO     | ***************************************
[2025-10-11 17:49:50] 2025-10-12 00:49:18,847 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:49:50] 2025-10-12 00:49:18,847 | INFO     | ***************************************
[2025-10-11 17:49:50] 2025-10-12 00:49:18,848 | INFO     | 
[2025-10-11 17:49:50] 2025-10-12 00:49:18,851 | INFO     | architecture information:
[2025-10-11 17:49:50] 2025-10-12 00:49:18,851 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:49:50] 2025-10-12 00:49:18,886 | INFO     | cat /etc/os-release:
[2025-10-11 17:49:50] NAME="CentOS Linux"
[2025-10-11 17:49:50] VERSION="7 (Core)"
[2025-10-11 17:49:50] ID="centos"
[2025-10-11 17:49:50] ID_LIKE="rhel fedora"
[2025-10-11 17:49:50] VERSION_ID="7"
[2025-10-11 17:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:49:50] ANSI_COLOR="0;31"
[2025-10-11 17:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:49:50] HOME_URL="https://www.centos.org/"
[2025-10-11 17:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:49:50] 
[2025-10-11 17:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:49:50] 
[2025-10-11 17:49:50] 2025-10-12 00:49:18,886 | INFO     | ***************************************
[2025-10-11 17:49:50] 2025-10-12 00:49:19,390 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 17:49:50] 2025-10-12 00:49:19,548 | INFO     | sufficient remaining disk space (967628029952 B)
[2025-10-11 17:49:50] 2025-10-12 00:49:19,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:49:50] 2025-10-12 00:49:19,549 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:49:50] 2025-10-12 00:49:19,549 | INFO     | update_server=False
[2025-10-11 17:49:50] 2025-10-12 00:49:19,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:49:50] 2025-10-12 00:49:19,567 | INFO     | all data control threads have been joined
[2025-10-11 17:49:50] 2025-10-12 00:49:19,748 | INFO     | all job control threads have been joined
[2025-10-11 17:49:50] 2025-10-12 00:49:19,879 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:49:50] 2025-10-12 00:49:19,879 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:49:50] 2025-10-12 00:49:19,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:49:50] 2025-10-12 00:49:19,880 | INFO     | will abort loop
[2025-10-11 17:49:50] 2025-10-12 00:49:20,569 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,582 | INFO     | [data] control thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:49:50] 2025-10-12 00:49:20,754 | INFO     | [job] control thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,836 | INFO     | [job] validate thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,886 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:20,964 | INFO     | all payload control threads have been joined
[2025-10-11 17:49:50] 2025-10-12 00:49:21,194 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:21,227 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:21,392 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:21,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:49:50] 2025-10-12 00:49:21,883 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:21,927 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:21,969 | INFO     | [payload] control thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:22,018 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:22,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:49:50] 2025-10-12 00:49:22,605 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:22,715 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:26,226 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:49:50] 2025-10-12 00:49:37,983 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:49:50] 2025-10-12 00:49:38,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761709082432)>', '<ExcThread(monitor, started 139761155028736)>']
[2025-10-11 17:49:50] 2025-10-12 00:49:43,865 | INFO     | all workflow threads have been joined
[2025-10-11 17:49:50] 2025-10-12 00:49:43,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:49:50] 2025-10-12 00:49:43,865 | INFO     | traces error code: 0
[2025-10-11 17:49:50] 2025-10-12 00:49:43,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:49:50] 2025-10-12 00:49:49,386 | INFO     | PID=4079189 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:49:50] 2025-10-12 00:49:49,387 | INFO     | .. there are 33 such processes running
[2025-10-11 17:49:50] 2025-10-12 00:49:49,391 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:49:50] 2025-10-12 00:49:49,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:49:50] 2025-10-12 00:49:49,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:49:50] 2025-10-12 00:49:49,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:49:50] 2025-10-12 00:49:49,391 | INFO     | [monitor] control thread has ended
[2025-10-11 17:49:50] 2025-10-12 00:49:49,646 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:49:50] 2025-10-12 00:49:49,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:49:50] 2025-10-12 00:49:49,650 [wrapper] pilotpid: 4079189
[2025-10-11 17:49:50] 2025-10-12 00:49:49,651 [wrapper] Pilot exit status: 0
[2025-10-11 17:49:50] 2025-10-12 00:49:49,738 [wrapper] pandaids: 6838990361
[2025-10-11 17:49:50] 2025-10-12 00:49:50,039 [wrapper] cleanup supervisor_pilot 4079195 4079190
[2025-10-11 17:49:50] 2025-10-12 00:49:50,056 [wrapper] Test setup, not cleaning
[2025-10-11 17:49:50] 2025-10-12 00:49:50,068 [wrapper] apfmon messages muted
[2025-10-11 17:49:50] 2025-10-12 00:49:50,069 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:49:50] 2025-10-12 00:49:50,071 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:49:50]  *** Error codes and diagnostics ***
[2025-10-11 17:49:50]     "exeErrorCode": 65,
[2025-10-11 17:49:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:49:50]     "pilotErrorCode": 1305,
[2025-10-11 17:49:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:49:50]  *** Listing of results directory ***
[2025-10-11 17:49:50] total 222108
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc    557409 Oct 11 15:04 pilot3.tar.gz
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      5112 Oct 11 15:14 queuedata.json
[2025-10-11 17:49:50] -rwx------. 1 boinc boinc     36292 Oct 11 15:17 runpilot2-wrapper.sh
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc       100 Oct 11 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:49:50] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 17:44 run_atlas
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc       105 Oct 11 17:44 job.xml
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      6442 Oct 11 17:44 init_data.xml
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc 223325291 Oct 11 17:44 EVNT.46676267._002654.pool.root.1
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:44 start_atlas.sh
[2025-10-11 17:49:50] drwxrwx--x. 2 boinc boinc      4096 Oct 11 17:44 shared
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc    569683 Oct 11 17:44 input.tar.gz
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc         0 Oct 11 17:44 boinc_lockfile
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      2550 Oct 11 17:44 pandaJob.out
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc    975496 Oct 11 17:44 agis_schedconf.cvmfs.json
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc   1560580 Oct 11 17:44 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:49:50] drwx------. 5 boinc boinc      4096 Oct 11 17:44 pilot3
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc       524 Oct 11 17:46 boinc_task_state.xml
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc       950 Oct 11 17:46 memory_monitor_summary.json
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc     22481 Oct 11 17:46 log.46676269._066014.job.log.tgz.1
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc      8388 Oct 11 17:49 heartbeat.json
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      8192 Oct 11 17:49 boinc_mmap_file
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc        23 Oct 11 17:49 wrapper_checkpoint.txt
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc        95 Oct 11 17:49 pilot_heartbeat.json
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc       823 Oct 11 17:49 pilotlog.txt
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc     95997 Oct 11 17:49 log.46676269._066014.job.log.1
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc       188 Oct 11 17:49 output.list
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc       620 Oct 11 17:49 runtime_log
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc    133120 Oct 11 17:49 result.tar.gz
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      8526 Oct 11 17:49 runtime_log.err
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc       644 Oct 11 17:49 PJ5KDm64wR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWnhNDmas1EHn.diag
[2025-10-11 17:49:50] -rw-r--r--. 1 boinc boinc      2134 Oct 11 17:49 stderr.txt
[2025-10-11 17:49:50] No HITS result produced
[2025-10-11 17:49:50]  *** Contents of shared directory: ***
[2025-10-11 17:49:50] total 218804
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc 223325291 Oct 11 17:44 ATLAS.root_0
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:44 start_atlas.sh
[2025-10-11 17:49:50] -rw-r--r--. 2 boinc boinc    569683 Oct 11 17:44 input.tar.gz
[2025-10-11 17:49:50] -rw-------. 1 boinc boinc    133120 Oct 11 17:49 result.tar.gz
17:49:52 (4075473): run_atlas exited; CPU time 30.096115
17:49:52 (4075473): called boinc_finish(0)

</stderr_txt>
]]>

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