Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 02:37:15 (7844): vboxwrapper version 26210
2025-10-12 02:37:15 (7844): BOINC client version: 8.0.2
2025-10-12 02:37:20 (7844): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-12 02:37:20 (7844): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 02:37:21 (7844): Create VM. (boinc_dd908aa684f7d800, slot#0)
2025-10-12 02:37:21 (7844): Setting Memory Size for VM. (4200MB)
2025-10-12 02:37:22 (7844): Setting CPU Count for VM. (2)
2025-10-12 02:37:22 (7844): Setting Chipset Options for VM.
2025-10-12 02:37:23 (7844): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 02:37:23 (7844): Setting Boot Options for VM.
2025-10-12 02:37:24 (7844): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 02:37:25 (7844): Enabling VM Network Access.
2025-10-12 02:37:25 (7844): Disabling USB Support for VM.
2025-10-12 02:37:25 (7844): Disabling COM Port Support for VM.
2025-10-12 02:37:26 (7844): Disabling LPT Port Support for VM.
2025-10-12 02:37:26 (7844): Disabling Audio Support for VM.
2025-10-12 02:37:26 (7844): Disabling Clipboard Support for VM.
2025-10-12 02:37:27 (7844): Disabling Drag and Drop Support for VM.
2025-10-12 02:37:27 (7844): Adding storage controller(s) to VM.
2025-10-12 02:37:28 (7844): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 02:37:31 (7844): Adding VirtualBox Guest Additions to VM.
2025-10-12 02:37:31 (7844): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 02:37:32 (7844): forwarding host port 54025 to guest port 80
2025-10-12 02:37:32 (7844): Enabling remote desktop for VM.
2025-10-12 02:37:33 (7844): Enabling shared directory for VM.
2025-10-12 02:37:33 (7844): Starting VM using VBoxManage interface. (boinc_dd908aa684f7d800, slot#0)
2025-10-12 02:37:54 (7844): Successfully started VM. (PID = '4332')
2025-10-12 02:37:54 (7844): Reporting VM Process ID to BOINC.
2025-10-12 02:37:54 (7844): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-12 02:37:54 (7844): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 02:37:54 (7844): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 02:37:54 (7844): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 02:37:54 (7844): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 02:37:54 (7844): Detected: Web Application Enabled (http://localhost:54025)
2025-10-12 02:37:54 (7844): Detected: Remote Desktop Enabled (localhost:54026)
2025-10-12 02:37:54 (7844): Preference change detected
2025-10-12 02:37:54 (7844): Setting CPU throttle for VM. (1%)
2025-10-12 02:37:54 (7844): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 02:37:57 (7844): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 02:37:57 (7844): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 02:38:22 (7844): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 02:38:22 (7844): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 02:38:22 (7844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 02:40:17 (7844): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 02:40:17 (7844): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 02:44:34 (7844): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.100801 main     Log opened 2025-10-12T02:44:32.825151000Z
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101256 main     OS Product: Linux
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101392 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101578 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101702 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101706 main     Process ID: 1326
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.101707 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 02:44:34 (7844): Guest Log: 00:00:00.104890 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 02:44:40 (7844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 02:44:40 (7844): Guest Log: [INFO] Mounting shared directory
2025-10-12 02:44:43 (7844): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 02:44:45 (7844): Guest Log: 00:00:10.299070 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 792 334 000ns (GuestNow=1 760 229 884 150 422 000 ns GuestLast=1 760 237 072 942 756 000 ns fSetTimeLastLoop=true )
2025-10-12 02:45:18 (7844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 02:45:18 (7844): Guest Log: [INFO] Detected branch: prod
2025-10-12 02:45:21 (7844): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 02:45:22 (7844): Guest Log: Copying input files
2025-10-12 02:46:16 (7844): Guest Log: Copied input files into RunAtlas.
2025-10-12 02:46:18 (7844): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 02:46:18 (7844): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 02:46:19 (7844): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 02:46:19 (7844): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 02:46:51 (7844): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 02:46:59 (7844): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 02:46:59 (7844): Guest Log: 2.6.3.0 1620 1 30064 151601 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 02:47:26 (7844): Guest Log: copied the webapp to /var/www
2025-10-12 02:47:28 (7844): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-12 02:47:28 (7844): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-12 02:47:31 (7844): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 02:47:33 (7844): Guest Log:  *** Starting ATLAS job. (PandaID=6838851182 taskID=46676269) ***
2025-10-12 03:00:23 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 03:01:23 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 03:03:29 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 03:03:49 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 03:05:08 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 03:05:29 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 03:18:21 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 03:18:42 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 03:33:59 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 03:34:20 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 03:59:43 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 04:00:43 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 04:16:04 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 04:17:47 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 04:24:14 (7844): Status Report: Elapsed Time: '6000.355217'
2025-10-12 04:24:14 (7844): Status Report: CPU Time: '1564.765625'
2025-10-12 04:41:03 (7844): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 04:41:18 (7844): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 04:51:01 (7844): Guest Log:  *** Job finished ***
2025-10-12 04:51:01 (7844): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:11,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:11,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:22,953 | INFO     | [monitor] cgroup control has ended
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:23,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189436999488)>', '<ExcThread(monitor, started 140188848211712)>']
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:23,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:23,406 | INFO     | [monitor] control thread has ended
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:28,190 | INFO     | all workflow threads have been joined
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:28,191 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:28,192 | INFO     | traces error code: 0
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:28,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:32,826 [wrapper] ==== pilot stdout END ====
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:33,249 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:33,665 [wrapper] pilotpid: 6216
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:33,983 [wrapper] Pilot exit status: 0
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:35,754 [wrapper] pandaids: 6838851182
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:38,020 [wrapper] cleanup supervisor_pilot   978 6217
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:38,441 [wrapper] Test setup, not cleaning
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:38,841 [wrapper] apfmon messages muted
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:39,058 [wrapper] ==== wrapper stdout END ====
2025-10-12 04:51:01 (7844): Guest Log: 2025-10-12 02:45:39,467 [wrapper] ==== wrapper stderr END ====
2025-10-12 04:51:02 (7844): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 04:51:02 (7844): Guest Log:     "exeErrorCode": 65,
2025-10-12 04:51:02 (7844): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-10-12 04:51:02 (7844): Guest Log:     "pilotErrorCode": 1305,
2025-10-12 04:51:02 (7844): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-10-12 04:51:02 (7844): Guest Log:  *** Listing of results directory ***
2025-10-12 04:51:02 (7844): Guest Log: total 4904
2025-10-12 04:51:02 (7844): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 11 19:02 pilot3.tar.gz
2025-10-12 04:51:03 (7844): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 11 19:34 runpilot2-wrapper.sh
2025-10-12 04:51:03 (7844): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 11 19:34 queuedata.json
2025-10-12 04:51:03 (7844): Guest Log: -rwxr-xr-x. 1 atlas atlas    8775 Oct 12 00:46 init_data.xml
2025-10-12 04:51:03 (7844): Guest Log: -rwxr-xr-x. 1 atlas atlas  569677 Oct 12 00:46 input.tar.gz
2025-10-12 04:51:03 (7844): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 12 00:46 start_atlas.sh
2025-10-12 04:51:03 (7844): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 12 00:46 EVNT.46676267._002551.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 04:51:03 (7844): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Oct 12 00:47 pandaJob.out
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas  975496 Oct 12 01:02 agis_schedconf.cvmfs.json
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 12 01:02 agis_ddmendpoints.agis.ALL.json
2025-10-12 04:51:03 (7844): Guest Log: drwx------. 5 atlas atlas    4096 Oct 12 01:03 pilot3
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas    1013 Oct 12 02:34 memory_monitor_summary.json
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas   68728 Oct 12 02:35 log.46676269._063484.job.log.tgz.1
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas    8652 Oct 12 02:44 heartbeat.json
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas      95 Oct 12 02:45 pilot_heartbeat.json
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas    4806 Oct 12 02:45 pilotlog.txt
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas  521964 Oct 12 02:45 log.46676269._063484.job.log.1
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas     188 Oct 12 02:45 output.list
2025-10-12 04:51:03 (7844): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 12 02:45 runtime_log
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas  614400 Oct 12 02:45 result.tar.gz
2025-10-12 04:51:03 (7844): Guest Log: -rw-------. 1 atlas atlas     658 Oct 12 02:45 zLlMDmAXuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyNhNDm2Wcerm.diag
2025-10-12 04:51:03 (7844): Guest Log: -rw-r--r--. 1 atlas atlas    8511 Oct 12 02:45 runtime_log.err
2025-10-12 04:51:04 (7844): Guest Log: Looking for outputfile HITS.46676269._063484.pool.root.1
2025-10-12 04:51:04 (7844): Guest Log: No HITS file was produced
2025-10-12 04:51:04 (7844): Guest Log: Successfully finished the ATLAS job!
2025-10-12 04:51:04 (7844): Guest Log: Copying the results back to the shared directory!
2025-10-12 04:51:08 (7844): Guest Log:  *** Contents of shared directory: ***
2025-10-12 04:51:10 (7844): Guest Log: total 220308
2025-10-12 04:51:10 (7844): Guest Log: -rwxrwxrwx. 1 root root 224376817 Oct 12 00:37 ATLAS.root_0
2025-10-12 04:51:10 (7844): Guest Log: -rwxrwxrwx. 1 root root      8775 Oct 12 00:37 init_data.xml
2025-10-12 04:51:10 (7844): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 12 00:36 input.tar.gz
2025-10-12 04:51:10 (7844): Guest Log: -rwxrwxrwx. 1 root root    614400 Oct 12  2025 result.tar.gz
2025-10-12 04:51:10 (7844): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 00:36 start_atlas.sh
2025-10-12 04:51:10 (7844): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 04:51:11 (7844): VM Completion File Detected.
2025-10-12 04:51:11 (7844): Powering off VM.
2025-10-12 04:51:14 (7844): Successfully stopped VM.
2025-10-12 04:51:14 (7844): Deregistering VM. (boinc_dd908aa684f7d800, slot#0)
2025-10-12 04:51:14 (7844): Removing network bandwidth throttle group from VM.
2025-10-12 04:51:15 (7844): Removing VM from VirtualBox.
2025-10-12 04:51:20 (7844): called boinc_finish(0)

</stderr_txt>
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