Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:20 (3056919): wrapper (7.7.26015): starting
11:34:20 (3056919): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 11:34:20] Arguments: --nthreads 6
[2025-10-12 11:34:20] Threads: 6
[2025-10-12 11:34:20] Checking for CVMFS
[2025-10-12 11:34:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:34:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:34:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:34:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:34:20] 2.11.5.0 3651556 3705 71620 151604 1 57 38604481 52428801 1858 130560 0 11366883 99.998 124520 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 11:34:20] CVMFS is ok
[2025-10-12 11:34:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:34:20] Checking for apptainer binary...
[2025-10-12 11:34:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:34:20] Running /usr/bin/apptainer --version
[2025-10-12 11:34:20] apptainer version 1.3.5-1.el9
[2025-10-12 11:34:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:34:20] testio008
[2025-10-12 11:34:20] apptainer works
[2025-10-12 11:34:20] Set ATHENA_PROC_NUMBER=6
[2025-10-12 11:34:20] Set ATHENA_CORE_NUMBER=6
[2025-10-12 11:34:20] Starting ATLAS job with PandaID=6838632124
[2025-10-12 11:34:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:40:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:40:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 12:40:02]  replicas=None
[2025-10-12 12:40:02]  scope=mc23_13p6TeV
[2025-10-12 12:40:02]  status=None
[2025-10-12 12:40:02]  status_code=0
[2025-10-12 12:40:02]  storage_token=
[2025-10-12 12:40:02]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6838632124/log.46676269._060654.job.log.tgz.1
[2025-10-12 12:40:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/6c/log.46676269._060654.job.log.tgz.1
[2025-10-12 12:40:02]  workdir=None
[2025-10-12 12:40:02] ]
[2025-10-12 12:40:02] 2025-10-12 03:39:26,611 | INFO     | transferring file log.46676269._060654.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6838632124/log.46676269._060654.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 12:40:02] 2025-10-12 03:39:26,611 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6838632124/log.46676269._060654.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._060654.job
[2025-10-12 12:40:02] 2025-10-12 03:39:26,619 | INFO     | adding to output.list: log.46676269._060654.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/6c/log.46676269._060654.job.log.tg
[2025-10-12 12:40:02] 2025-10-12 03:39:26,619 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:40:02] 2025-10-12 03:39:26,619 | INFO     | summary of transferred files:
[2025-10-12 12:40:02] 2025-10-12 03:39:26,619 | INFO     |  -- lfn=log.46676269._060654.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:40:02] 2025-10-12 03:39:26,620 | INFO     | stage-out finished correctly
[2025-10-12 12:40:02] 2025-10-12 03:39:26,663 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:40:02] 2025-10-12 03:39:27,112 | INFO     | time since job start (3898s) is within the limit (172800.0s)
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | job 6838632124 has state=finished
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | preparing for final server update for job 6838632124 in state='finished'
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | job 6838632124 has finished - writing final server update
[2025-10-12 12:40:02] 2025-10-12 03:39:28,772 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:40:02] 2025-10-12 03:39:28,773 | INFO     | executing command: lscpu
[2025-10-12 12:40:02] 2025-10-12 03:39:28,784 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:40:02] 2025-10-12 03:39:29,118 | INFO     | time since job start (3900s) is within the limit (172800.0s)
[2025-10-12 12:40:02] 2025-10-12 03:39:29,745 | WARNING  | process 3067424 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:40:02] 2025-10-12 03:39:29,745 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838632124/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:40:02] 2025-10-12 03:39:29,782 | INFO     | number of running child processes to parent process 3067424: 1
[2025-10-12 12:40:02] 2025-10-12 03:39:29,782 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:40:02] 2025-10-12 03:39:30,524 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:40:02] 2025-10-12 03:39:30,525 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4060.7602500000003
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838632124/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | INFO     | extracted standard info from prmon json
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:40:02] 2025-10-12 03:39:30,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:40:02] 2025-10-12 03:39:30,528 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:40:02] 2025-10-12 03:39:30,528 | INFO     | sum of square deviations: 57407588.0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | sum of deviations: -2907112684.9999995
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | mean x: 1760238503.0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | mean y: 2529827.210526316
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | -- intersect: 89140775466.38821
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | intersect: 89140775466.38821
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | chi2: 0.021946785212293766
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | -- intersect: 89140775466.38821
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | current memory leak: -50.64 B/s (using 57 data points, chi2=0.02)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | could have reported an average CPU frequency of 3366 MHz (6 samples)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | ..............................
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . Timing measurements:
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . get job = 0 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . initial setup = 5 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . payload setup = 2 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . stage-in = 0 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . payload execution = 3874 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . stage-out = 0 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | . log creation = 0 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,529 | INFO     | ..............................
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | 
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | job summary report
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | --------------------------------------------------
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | PanDA job id: 6838632124
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | task id: 46676269
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | errors: (none)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | pilot state: finished 
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | transexitcode: 0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | exeerrorcode: 0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,573 | INFO     | exeerrordiag: 
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | exitcode: 0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | exitmsg: OK
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | cpuconsumptiontime: 20595 s
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | nevents: 400
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | neventsw: 0
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | pid: 3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | pgrp: 3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | corecount: 6
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | event service: False
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 3881: 2374992, 3882: 2384045, 3883: 2384045, 3886: 2384367}
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | --------------------------------------------------
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | 
[2025-10-12 12:40:02] 2025-10-12 03:39:30,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | job 6838632124 has completed (purged errors)
[2025-10-12 12:40:02] 2025-10-12 03:39:30,583 | INFO     | overall cleanup function is called
[2025-10-12 12:40:02] 2025-10-12 03:39:31,588 | INFO     | --- collectZombieJob: --- 10, [3067424]
[2025-10-12 12:40:02] 2025-10-12 03:39:31,589 | INFO     | zombie collector waiting for pid 3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:31,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:40:02] 2025-10-12 03:39:31,589 | INFO     | collected zombie processes
[2025-10-12 12:40:02] 2025-10-12 03:39:31,589 | INFO     | will attempt to kill all subprocesses of pid=3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:31,625 | INFO     | process IDs to be killed: [3067424] (in reverse order)
[2025-10-12 12:40:02] 2025-10-12 03:39:31,643 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:40:02] 2025-10-12 03:39:31,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:40:02] 2025-10-12 03:39:31,645 | INFO     | did not find any defunct processes belonging to 3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:31,647 | INFO     | did not find any defunct processes belonging to 3067424
[2025-10-12 12:40:02] 2025-10-12 03:39:31,647 | INFO     | ready for new job
[2025-10-12 12:40:02] 2025-10-12 03:39:31,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:40:02] 2025-10-12 03:39:31,647 | INFO     | ***************************************
[2025-10-12 12:40:02] 2025-10-12 03:39:31,648 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:40:02] 2025-10-12 03:39:31,648 | INFO     | ***************************************
[2025-10-12 12:40:02] 2025-10-12 03:39:31,648 | INFO     | 
[2025-10-12 12:40:02] 2025-10-12 03:39:31,648 | INFO     | architecture information:
[2025-10-12 12:40:02] 2025-10-12 03:39:31,648 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:40:02] 2025-10-12 03:39:31,655 | INFO     | cat /etc/os-release:
[2025-10-12 12:40:02] NAME="CentOS Linux"
[2025-10-12 12:40:02] VERSION="7 (Core)"
[2025-10-12 12:40:02] ID="centos"
[2025-10-12 12:40:02] ID_LIKE="rhel fedora"
[2025-10-12 12:40:02] VERSION_ID="7"
[2025-10-12 12:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:40:02] ANSI_COLOR="0;31"
[2025-10-12 12:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:40:02] HOME_URL="https://www.centos.org/"
[2025-10-12 12:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:40:02] 
[2025-10-12 12:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:40:02] 
[2025-10-12 12:40:02] 2025-10-12 03:39:31,655 | INFO     | ***************************************
[2025-10-12 12:40:02] 2025-10-12 03:39:32,157 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | INFO     | sufficient remaining disk space (281199771648 B)
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | INFO     | update_server=False
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:40:02] 2025-10-12 03:39:32,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:40:02] 2025-10-12 03:39:32,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:40:02] 2025-10-12 03:39:32,245 | INFO     | all data control threads have been joined
[2025-10-12 12:40:02] 2025-10-12 03:39:32,283 | INFO     | all payload control threads have been joined
[2025-10-12 12:40:02] 2025-10-12 03:39:32,284 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:40:02] 2025-10-12 03:39:32,285 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:40:02] 2025-10-12 03:39:32,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:40:02] 2025-10-12 03:39:32,285 | INFO     | will abort loop
[2025-10-12 12:40:02] 2025-10-12 03:39:32,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:40:02] 2025-10-12 03:39:33,170 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,170 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,250 | INFO     | [data] control thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,289 | INFO     | [payload] control thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,289 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,349 | INFO     | all job control threads have been joined
[2025-10-12 12:40:02] 2025-10-12 03:39:33,354 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,754 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,773 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:33,931 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:34,020 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:34,084 | INFO     | [job] validate thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:34,175 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:34,355 | INFO     | [job] control thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:34,769 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:35,848 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:40:02] 2025-10-12 03:39:36,716 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:43,062 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:40:02] 2025-10-12 03:39:44,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:40:02] 2025-10-12 03:39:44,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025569875776)>', '<ExcThread(monitor, started 140025220015872)>']
[2025-10-12 12:40:02] 2025-10-12 03:39:49,279 | INFO     | all workflow threads have been joined
[2025-10-12 12:40:02] 2025-10-12 03:39:49,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:40:02] 2025-10-12 03:39:49,280 | INFO     | traces error code: 0
[2025-10-12 12:40:02] 2025-10-12 03:39:49,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:40:02] 2025-10-12 03:40:02,266 | INFO     | PID=3060696 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:40:02] 2025-10-12 03:40:02,270 | INFO     | .. there are 3 such processes running
[2025-10-12 12:40:02] 2025-10-12 03:40:02,271 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:40:02] 2025-10-12 03:40:02,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:40:02] 2025-10-12 03:40:02,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:40:02] 2025-10-12 03:40:02,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:40:02] 2025-10-12 03:40:02,271 | INFO     | [monitor] control thread has ended
[2025-10-12 12:40:02] 2025-10-12 03:40:02,354 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:40:02] 2025-10-12 03:40:02,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:40:02] 2025-10-12 03:40:02,358 [wrapper] pilotpid: 3060696
[2025-10-12 12:40:02] 2025-10-12 03:40:02,360 [wrapper] Pilot exit status: 0
[2025-10-12 12:40:02] 2025-10-12 03:40:02,367 [wrapper] pandaids: 6838632124
[2025-10-12 12:40:02] 2025-10-12 03:40:02,387 [wrapper] cleanup supervisor_pilot 3123039 3060697
[2025-10-12 12:40:02] 2025-10-12 03:40:02,390 [wrapper] Test setup, not cleaning
[2025-10-12 12:40:02] 2025-10-12 03:40:02,393 [wrapper] apfmon messages muted
[2025-10-12 12:40:02] 2025-10-12 03:40:02,395 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:40:02] 2025-10-12 03:40:02,397 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:40:02]  *** Error codes and diagnostics ***
[2025-10-12 12:40:02]     "exeErrorCode": 0,
[2025-10-12 12:40:02]     "exeErrorDiag": "",
[2025-10-12 12:40:02]     "pilotErrorCode": 0,
[2025-10-12 12:40:02]     "pilotErrorDiag": "",
[2025-10-12 12:40:02]  *** Listing of results directory ***
[2025-10-12 12:40:02] total 412268
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc    557409 Oct 12 00:50 pilot3.tar.gz
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc      5112 Oct 12 01:08 queuedata.json
[2025-10-12 12:40:02] -rwx------. 1 boinc boinc     36292 Oct 12 01:09 runpilot2-wrapper.sh
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc       100 Oct 12 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:40:02] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 11:34 run_atlas
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc       105 Oct 12 11:34 job.xml
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc      9509 Oct 12 11:34 init_data.xml
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc 223714634 Oct 12 11:34 EVNT.46676267._002435.pool.root.1
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc     15120 Oct 12 11:34 start_atlas.sh
[2025-10-12 12:40:02] drwxrwx--x. 2 boinc boinc        68 Oct 12 11:34 shared
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc    569687 Oct 12 11:34 input.tar.gz
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc         0 Oct 12 11:34 boinc_lockfile
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc      2550 Oct 12 11:34 pandaJob.out
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc    975496 Oct 12 11:34 agis_schedconf.cvmfs.json
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc   1560580 Oct 12 11:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:40:02] drwx------. 5 boinc boinc      4096 Oct 12 11:34 pilot3
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc 192836136 Oct 12 12:39 HITS.46676269._060654.pool.root.1
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc       529 Oct 12 12:39 boinc_task_state.xml
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc      1020 Oct 12 12:39 memory_monitor_summary.json
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc    276892 Oct 12 12:39 log.46676269._060654.job.log.tgz.1
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc      7767 Oct 12 12:39 heartbeat.json
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc      8192 Oct 12 12:39 boinc_mmap_file
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc        27 Oct 12 12:39 wrapper_checkpoint.txt
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc        95 Oct 12 12:40 pilot_heartbeat.json
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc       822 Oct 12 12:40 pilotlog.txt
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc    584814 Oct 12 12:40 log.46676269._060654.job.log.1
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc       357 Oct 12 12:40 output.list
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc       620 Oct 12 12:40 runtime_log
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc    880640 Oct 12 12:40 result.tar.gz
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc      8661 Oct 12 12:40 runtime_log.err
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc       641 Oct 12 12:40 ipEODmMLrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVsgNDmYmuOTn.diag
[2025-10-12 12:40:02] -rw-r--r--. 1 boinc boinc     21516 Oct 12 12:40 stderr.txt
[2025-10-12 12:40:02] HITS file was successfully produced:
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc 192836136 Oct 12 12:39 shared/HITS.pool.root.1
[2025-10-12 12:40:02]  *** Contents of shared directory: ***
[2025-10-12 12:40:02] total 408228
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc 223714634 Oct 12 11:34 ATLAS.root_0
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc     15120 Oct 12 11:34 start_atlas.sh
[2025-10-12 12:40:02] -rw-r--r--. 2 boinc boinc    569687 Oct 12 11:34 input.tar.gz
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc 192836136 Oct 12 12:39 HITS.pool.root.1
[2025-10-12 12:40:02] -rw-------. 1 boinc boinc    880640 Oct 12 12:40 result.tar.gz
12:40:04 (3056919): run_atlas exited; CPU time 20621.469127
12:40:04 (3056919): called boinc_finish(0)

</stderr_txt>
]]>

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