Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:44 (4108572): wrapper (7.7.26015): starting
20:56:44 (4108572): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 20:56:44] Arguments: --nthreads 11
[2025-10-11 20:56:44] Threads: 11
[2025-10-11 20:56:44] Checking for CVMFS
[2025-10-11 20:56:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:56:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:56:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:56:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:56:46] 2.13.2.0 5415 4986 126964 151601 0 508 33399924 40960000 12594 16776704 0 8233079 99.864 1683989 34691 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 20:56:46] CVMFS is ok
[2025-10-11 20:56:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:56:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:56:46] Further information can be found at the LHC@home message board.
[2025-10-11 20:56:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:56:46] Checking for apptainer binary...
[2025-10-11 20:56:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:56:46] Running /usr/bin/apptainer --version
[2025-10-11 20:56:46] apptainer version 1.4.3-1.el9
[2025-10-11 20:56:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:56:47] c-210-33-1.aglt2.org
[2025-10-11 20:56:47] apptainer works
[2025-10-11 20:56:47] Set ATHENA_PROC_NUMBER=11
[2025-10-11 20:56:47] Set ATHENA_CORE_NUMBER=11
[2025-10-11 20:56:48] Starting ATLAS job with PandaID=6838851568
[2025-10-11 20:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:02:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:02:18] 2025-10-12 05:01:45,152 | INFO     | intersect: -23553514476.02323
[2025-10-12 01:02:18] 2025-10-12 05:01:45,152 | INFO     | chi2: 1.7292304527810534
[2025-10-12 01:02:18] 2025-10-12 05:01:45,152 | INFO     | current chi2=1.7292304527810534 (change=-0.017042802767355078 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,152 | INFO     | right removable region: 232
[2025-10-12 01:02:18] 2025-10-12 05:01:45,153 | INFO     | sum of square deviations: 3922381864.9356446
[2025-10-12 01:02:18] 2025-10-12 05:01:45,155 | INFO     | sum of deviations: 7868998650.240339
[2025-10-12 01:02:18] 2025-10-12 05:01:45,155 | INFO     | mean x: 1760238164.5751073
[2025-10-12 01:02:18] 2025-10-12 05:01:45,155 | INFO     | mean y: 2650517.3862660946
[2025-10-12 01:02:18] 2025-10-12 05:01:45,155 | INFO     | -- intersect: -3528701660.474752
[2025-10-12 01:02:18] 2025-10-12 05:01:45,155 | INFO     | intersect: -3528701660.474752
[2025-10-12 01:02:18] 2025-10-12 05:01:45,156 | INFO     | chi2: 0.07594391358324089
[2025-10-12 01:02:18] 2025-10-12 05:01:45,156 | INFO     | current chi2=0.07594391358324089 (change=95.60747635270427 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,156 | INFO     | sum of square deviations: 3675210778.2456264
[2025-10-12 01:02:18] 2025-10-12 05:01:45,159 | INFO     | sum of deviations: -884549846.9824536
[2025-10-12 01:02:18] 2025-10-12 05:01:45,159 | INFO     | mean x: 1760238317.0877192
[2025-10-12 01:02:18] 2025-10-12 05:01:45,159 | INFO     | mean y: 2655898.149122807
[2025-10-12 01:02:18] 2025-10-12 05:01:45,159 | INFO     | -- intersect: 426310112.2826157
[2025-10-12 01:02:18] 2025-10-12 05:01:45,159 | INFO     | intersect: 426310112.2826157
[2025-10-12 01:02:18] 2025-10-12 05:01:45,160 | INFO     | chi2: 0.024725030409099864
[2025-10-12 01:02:18] 2025-10-12 05:01:45,160 | INFO     | current chi2=0.024725030409099864 (change=67.4430388921172 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,161 | INFO     | sum of square deviations: 3438700174.215225
[2025-10-12 01:02:18] 2025-10-12 05:01:45,162 | INFO     | sum of deviations: 3096502522.7399073
[2025-10-12 01:02:18] 2025-10-12 05:01:45,163 | INFO     | mean x: 1760238469.5829597
[2025-10-12 01:02:18] 2025-10-12 05:01:45,163 | INFO     | mean y: 2653325.878923767
[2025-10-12 01:02:18] 2025-10-12 05:01:45,163 | INFO     | -- intersect: -1582417365.2380743
[2025-10-12 01:02:18] 2025-10-12 05:01:45,163 | INFO     | intersect: -1582417365.2380743
[2025-10-12 01:02:18] 2025-10-12 05:01:45,164 | INFO     | chi2: 0.014707849105411844
[2025-10-12 01:02:18] 2025-10-12 05:01:45,164 | INFO     | current chi2=0.014707849105411844 (change=40.51433360422186 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,164 | INFO     | sum of square deviations: 3212521292.1651416
[2025-10-12 01:02:18] 2025-10-12 05:01:45,166 | INFO     | sum of deviations: 5774798298.697247
[2025-10-12 01:02:18] 2025-10-12 05:01:45,167 | INFO     | mean x: 1760238622.0917432
[2025-10-12 01:02:18] 2025-10-12 05:01:45,167 | INFO     | mean y: 2651543.1651376146
[2025-10-12 01:02:18] 2025-10-12 05:01:45,167 | INFO     | -- intersect: -3161536979.0860777
[2025-10-12 01:02:18] 2025-10-12 05:01:45,167 | INFO     | intersect: -3161536979.0860777
[2025-10-12 01:02:18] 2025-10-12 05:01:45,168 | INFO     | chi2: 0.0028325012300953753
[2025-10-12 01:02:18] 2025-10-12 05:01:45,168 | INFO     | current chi2=0.0028325012300953753 (change=80.74156724212558 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,168 | INFO     | sum of square deviations: 2996508365.464801
[2025-10-12 01:02:18] 2025-10-12 05:01:45,170 | INFO     | sum of deviations: 4625000935.281689
[2025-10-12 01:02:18] 2025-10-12 05:01:45,170 | INFO     | mean x: 1760238774.5915494
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | mean y: 2652354.267605634
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | -- intersect: -2714211737.497481
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | intersect: -2714211737.497481
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | chi2: 0.002416218124147323
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | current chi2=0.002416218124147323 (change=14.696661082616206 %)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,171 | INFO     | left removable region: 50
[2025-10-12 01:02:18] 2025-10-12 05:01:45,172 | INFO     | sum of square deviations: 1869361912.0934007
[2025-10-12 01:02:18] 2025-10-12 05:01:45,173 | INFO     | sum of deviations: 1002601262.8461546
[2025-10-12 01:02:18] 2025-10-12 05:01:45,174 | INFO     | mean x: 1760239354.1263735
[2025-10-12 01:02:18] 2025-10-12 05:01:45,174 | INFO     | mean y: 2655376.6153846155
[2025-10-12 01:02:18] 2025-10-12 05:01:45,174 | INFO     | -- intersect: -941419811.7906282
[2025-10-12 01:02:18] 2025-10-12 05:01:45,174 | INFO     | intersect: -941419811.7906282
[2025-10-12 01:02:18] 2025-10-12 05:01:45,175 | INFO     | chi2: 0.0012563180548704831
[2025-10-12 01:02:18] 2025-10-12 05:01:45,175 | INFO     | -- intersect: -941419811.7906282
[2025-10-12 01:02:18] 2025-10-12 05:01:45,175 | INFO     | current memory leak: 0.54 B/s (using 182 data points, chi2=0.00)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | could have reported an average CPU frequency of 2558 MHz (11 samples)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | ..............................
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | . Timing measurements:
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | . get job = 0 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | . initial setup = 3 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,176 | INFO     | . payload setup = 29 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,177 | INFO     | . stage-in = 0 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,177 | INFO     | . payload execution = 14533 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,177 | INFO     | . stage-out = 2 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,177 | INFO     | . log creation = 0 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,177 | INFO     | ..............................
[2025-10-12 01:02:18] 2025-10-12 05:01:45,326 | INFO     | 
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | job summary report
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | --------------------------------------------------
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | PanDA job id: 6838851568
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | task id: 46676269
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | errors: (none)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | pilot state: finished 
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | transexitcode: 0
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | exeerrorcode: 0
[2025-10-12 01:02:18] 2025-10-12 05:01:45,327 | INFO     | exeerrordiag: 
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | exitcode: 0
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | exitmsg: OK
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | cpuconsumptiontime: 48237 s
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | nevents: 400
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | neventsw: 0
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | pid: 4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | pgrp: 4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | corecount: 11
[2025-10-12 01:02:18] 2025-10-12 05:01:45,328 | INFO     | event service: False
[2025-10-12 01:02:18] 2025-10-12 05:01:45,329 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 25: 2349203, 34: 2349231, 14567: 2380297, 14569: 2389295, 14572: 2389351, 14583: 2389545}
[2025-10-12 01:02:18] 2025-10-12 05:01:45,329 | INFO     | --------------------------------------------------
[2025-10-12 01:02:18] 2025-10-12 05:01:45,329 | INFO     | 
[2025-10-12 01:02:18] 2025-10-12 05:01:45,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 01:02:18] 2025-10-12 05:01:45,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:02:18] 2025-10-12 05:01:45,377 | INFO     | job 6838851568 has completed (purged errors)
[2025-10-12 01:02:18] 2025-10-12 05:01:45,377 | INFO     | overall cleanup function is called
[2025-10-12 01:02:18] 2025-10-12 05:01:46,429 | INFO     | --- collectZombieJob: --- 10, [4120361]
[2025-10-12 01:02:18] 2025-10-12 05:01:46,430 | INFO     | zombie collector waiting for pid 4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:46,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:02:18] 2025-10-12 05:01:46,430 | INFO     | collected zombie processes
[2025-10-12 01:02:18] 2025-10-12 05:01:46,430 | INFO     | will attempt to kill all subprocesses of pid=4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:47,065 | INFO     | process IDs to be killed: [4120361] (in reverse order)
[2025-10-12 01:02:18] 2025-10-12 05:01:47,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:02:18] 2025-10-12 05:01:47,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:02:18] 2025-10-12 05:01:47,192 | INFO     | did not find any defunct processes belonging to 4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:47,200 | INFO     | did not find any defunct processes belonging to 4120361
[2025-10-12 01:02:18] 2025-10-12 05:01:47,200 | INFO     | ready for new job
[2025-10-12 01:02:18] 2025-10-12 05:01:47,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:02:18] 2025-10-12 05:01:47,203 | INFO     | ***************************************
[2025-10-12 01:02:18] 2025-10-12 05:01:47,203 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:02:18] 2025-10-12 05:01:47,203 | INFO     | ***************************************
[2025-10-12 01:02:18] 2025-10-12 05:01:47,203 | INFO     | 
[2025-10-12 01:02:18] 2025-10-12 05:01:47,206 | INFO     | architecture information:
[2025-10-12 01:02:18] 2025-10-12 05:01:47,206 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:02:18] 2025-10-12 05:01:47,222 | INFO     | cat /etc/os-release:
[2025-10-12 01:02:18] NAME="CentOS Linux"
[2025-10-12 01:02:18] VERSION="7 (Core)"
[2025-10-12 01:02:18] ID="centos"
[2025-10-12 01:02:18] ID_LIKE="rhel fedora"
[2025-10-12 01:02:18] VERSION_ID="7"
[2025-10-12 01:02:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:02:18] ANSI_COLOR="0;31"
[2025-10-12 01:02:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:02:18] HOME_URL="https://www.centos.org/"
[2025-10-12 01:02:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:02:18] 
[2025-10-12 01:02:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:02:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:02:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:02:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:02:18] 
[2025-10-12 01:02:18] 2025-10-12 05:01:47,223 | INFO     | ***************************************
[2025-10-12 01:02:18] 2025-10-12 05:01:47,726 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 01:02:18] 2025-10-12 05:01:47,777 | INFO     | sufficient remaining disk space (73557606400 B)
[2025-10-12 01:02:18] 2025-10-12 05:01:47,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:02:18] 2025-10-12 05:01:47,777 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:02:18] 2025-10-12 05:01:47,778 | INFO     | update_server=False
[2025-10-12 01:02:18] 2025-10-12 05:01:47,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:02:18] 2025-10-12 05:01:47,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:02:18] 2025-10-12 05:01:47,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:02:18] 2025-10-12 05:01:47,794 | INFO     | aborting loop
[2025-10-12 01:02:18] 2025-10-12 05:01:47,979 | INFO     | all job control threads have been joined
[2025-10-12 01:02:18] 2025-10-12 05:01:48,025 | INFO     | all data control threads have been joined
[2025-10-12 01:02:18] 2025-10-12 05:01:48,264 | INFO     | all payload control threads have been joined
[2025-10-12 01:02:18] 2025-10-12 05:01:48,798 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:48,827 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:48,843 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:48,893 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:48,986 | INFO     | [job] control thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:48,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:02:18] 2025-10-12 05:01:49,031 | INFO     | [data] control thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:49,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:49,158 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:49,241 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:49,271 | INFO     | [payload] control thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:49,797 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:50,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:50,211 | INFO     | [job] validate thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:50,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:02:18] 2025-10-12 05:01:50,330 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:51,321 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:01:53,004 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:02:18] 2025-10-12 05:02:07,136 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:02:18] 2025-10-12 05:02:07,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501002553152)>', '<ExcThread(monitor, started 140500518561536)>']
[2025-10-12 01:02:18] 2025-10-12 05:02:12,355 | INFO     | all workflow threads have been joined
[2025-10-12 01:02:18] 2025-10-12 05:02:12,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:02:18] 2025-10-12 05:02:12,356 | INFO     | traces error code: 0
[2025-10-12 01:02:18] 2025-10-12 05:02:12,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:02:18] 2025-10-12 05:02:18,403 | INFO     | PID=4112478 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:02:18] 2025-10-12 05:02:18,404 | INFO     | .. there are 11 such processes running
[2025-10-12 01:02:18] 2025-10-12 05:02:18,405 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:02:18] 2025-10-12 05:02:18,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:02:18] 2025-10-12 05:02:18,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:02:18] 2025-10-12 05:02:18,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:02:18] 2025-10-12 05:02:18,405 | INFO     | [monitor] control thread has ended
[2025-10-12 01:02:18] 2025-10-12 05:02:18,616 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:02:18] 2025-10-12 05:02:18,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:02:18] 2025-10-12 05:02:18,624 [wrapper] pilotpid: 4112478
[2025-10-12 01:02:18] 2025-10-12 05:02:18,628 [wrapper] Pilot exit status: 0
[2025-10-12 01:02:18] 2025-10-12 05:02:18,643 [wrapper] pandaids: 6838851568
[2025-10-12 01:02:18] 2025-10-12 05:02:18,696 [wrapper] cleanup supervisor_pilot  266751 4112479
[2025-10-12 01:02:18] 2025-10-12 05:02:18,700 [wrapper] Test setup, not cleaning
[2025-10-12 01:02:18] 2025-10-12 05:02:18,704 [wrapper] apfmon messages muted
[2025-10-12 01:02:18] 2025-10-12 05:02:18,707 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:02:18] 2025-10-12 05:02:18,710 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:02:18]  *** Error codes and diagnostics ***
[2025-10-12 01:02:18]     "exeErrorCode": 0,
[2025-10-12 01:02:18]     "exeErrorDiag": "",
[2025-10-12 01:02:18]     "pilotErrorCode": 0,
[2025-10-12 01:02:18]     "pilotErrorDiag": "",
[2025-10-12 01:02:18]  *** Listing of results directory ***
[2025-10-12 01:02:18] total 417736
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:43 queuedata.json
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-12 01:02:18] -rwx------. 1 boincer umatlas     36292 Oct 11 15:45 runpilot2-wrapper.sh
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas       100 Oct 11 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:02:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 20:56 run_atlas
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas       105 Oct 11 20:56 job.xml
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas 223345732 Oct 11 20:56 EVNT.46676267._002561.pool.root.1
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:56 start_atlas.sh
[2025-10-12 01:02:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 20:56 shared
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 20:56 input.tar.gz
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas         0 Oct 11 20:56 boinc_lockfile
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 20:56 pandaJob.out
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas    975496 Oct 11 20:57 agis_schedconf.cvmfs.json
[2025-10-12 01:02:18] drwx------. 5 boincer umatlas      4096 Oct 11 20:57 pilot3
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 00:57 init_data.xml
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas 195780970 Oct 12 01:00 HITS.46676269._063741.pool.root.1
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas       531 Oct 12 01:00 boinc_task_state.xml
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas      1044 Oct 12 01:01 memory_monitor_summary.json
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas    501707 Oct 12 01:01 log.46676269._063741.job.log.tgz.1
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas      7826 Oct 12 01:01 heartbeat.json
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:02 boinc_mmap_file
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas        28 Oct 12 01:02 wrapper_checkpoint.txt
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas        95 Oct 12 01:02 pilot_heartbeat.json
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas       823 Oct 12 01:02 pilotlog.txt
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas   1867383 Oct 12 01:02 log.46676269._063741.job.log.1
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas       357 Oct 12 01:02 output.list
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:02 runtime_log
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas   2385920 Oct 12 01:02 result.tar.gz
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas      8716 Oct 12 01:02 runtime_log.err
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas       658 Oct 12 01:02 FEfNDmkhuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgTSMDmYHrjRn.diag
[2025-10-12 01:02:18] -rw-r--r--. 1 boincer umatlas     21073 Oct 12 01:02 stderr.txt
[2025-10-12 01:02:18] HITS file was successfully produced:
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas 195780970 Oct 12 01:00 shared/HITS.pool.root.1
[2025-10-12 01:02:18]  *** Contents of shared directory: ***
[2025-10-12 01:02:18] total 412220
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas 223345732 Oct 11 20:56 ATLAS.root_0
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:56 start_atlas.sh
[2025-10-12 01:02:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 20:56 input.tar.gz
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas 195780970 Oct 12 01:00 HITS.pool.root.1
[2025-10-12 01:02:18] -rw-------. 1 boincer umatlas   2385920 Oct 12 01:02 result.tar.gz
01:02:20 (4108572): run_atlas exited; CPU time 48548.556912
01:02:20 (4108572): called boinc_finish(0)

</stderr_txt>
]]>

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