Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:54 (2738353): wrapper (7.7.26015): starting
12:52:54 (2738353): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 12:52:54] Arguments: --nthreads 3
[2025-10-12 12:52:54] Threads: 3
[2025-10-12 12:52:54] Checking for CVMFS
[2025-10-12 12:52:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:52:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:52:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:52:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:52:54] 2.9.2.0 1520902 4105 85420 151617 1 57 23124508 36864001 0 130560 0 3217705 99.991 140231 941 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 12:52:54] CVMFS is ok
[2025-10-12 12:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:52:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:52:54] Further information can be found at the LHC@home message board.
[2025-10-12 12:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:52:54] Checking for apptainer binary...
[2025-10-12 12:52:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:52:54] Running /usr/bin/apptainer --version
[2025-10-12 12:52:54] apptainer version 1.4.1-1.1
[2025-10-12 12:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:52:54] magicA250a
[2025-10-12 12:52:54] apptainer works
[2025-10-12 12:52:54] Set ATHENA_PROC_NUMBER=3
[2025-10-12 12:52:54] Set ATHENA_CORE_NUMBER=3
[2025-10-12 12:52:54] Starting ATLAS job with PandaID=6838851159
[2025-10-12 12:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:17:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:17:29] 2025-10-12 12:16:58,915 | INFO     | cat /etc/os-release:
[2025-10-12 14:17:29] NAME="CentOS Linux"
[2025-10-12 14:17:29] VERSION="7 (Core)"
[2025-10-12 14:17:29] ID="centos"
[2025-10-12 14:17:29] ID_LIKE="rhel fedora"
[2025-10-12 14:17:29] VERSION_ID="7"
[2025-10-12 14:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:17:29] ANSI_COLOR="0;31"
[2025-10-12 14:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:17:29] HOME_URL="https://www.centos.org/"
[2025-10-12 14:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:17:29] 
[2025-10-12 14:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:17:29] 
[2025-10-12 14:17:29] 2025-10-12 12:16:58,915 | INFO     | ***************************************
[2025-10-12 14:17:29] 2025-10-12 12:16:59,418 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | INFO     | sufficient remaining disk space (336841408512 B)
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | INFO     | update_server=False
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:17:29] 2025-10-12 12:16:59,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:17:29] 2025-10-12 12:16:59,782 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:17:29] 2025-10-12 12:16:59,782 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:17:29] 2025-10-12 12:16:59,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:17:29] 2025-10-12 12:16:59,782 | INFO     | will abort loop
[2025-10-12 14:17:29] 2025-10-12 12:16:59,960 | INFO     | all job control threads have been joined
[2025-10-12 14:17:29] 2025-10-12 12:17:00,255 | INFO     | all data control threads have been joined
[2025-10-12 14:17:29] 2025-10-12 12:17:00,434 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:00,434 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:00,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:17:29] 2025-10-12 12:17:00,649 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:00,764 | INFO     | all payload control threads have been joined
[2025-10-12 14:17:29] 2025-10-12 12:17:00,788 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:00,964 | INFO     | [job] control thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,068 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,141 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,260 | INFO     | [data] control thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,309 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,316 | INFO     | [job] validate thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,460 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:01,769 | INFO     | [payload] control thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:02,037 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:02,626 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:02,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:17:29] 2025-10-12 12:17:06,208 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:17:29] 2025-10-12 12:17:06,815 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:10,258 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:17:29] 2025-10-12 12:17:11,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:17:29] 2025-10-12 12:17:12,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626083161920)>', '<ExcThread(monitor, started 140625592698624)>']
[2025-10-12 14:17:29] 2025-10-12 12:17:17,964 | INFO     | all workflow threads have been joined
[2025-10-12 14:17:29] 2025-10-12 12:17:17,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:17:29] 2025-10-12 12:17:17,965 | INFO     | traces error code: 0
[2025-10-12 14:17:29] 2025-10-12 12:17:17,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:17:29] 2025-10-12 12:17:29,431 | INFO     | PID=2742072 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:17:29] 2025-10-12 12:17:29,431 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:17:29] 2025-10-12 12:17:29,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:17:29] 2025-10-12 12:17:29,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:17:29] 2025-10-12 12:17:29,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:17:29] 2025-10-12 12:17:29,432 | INFO     | [monitor] control thread has ended
[2025-10-12 14:17:29] 2025-10-12 12:17:29,478 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:17:29] 2025-10-12 12:17:29,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:17:29] 2025-10-12 12:17:29,482 [wrapper] pilotpid: 2742072
[2025-10-12 14:17:29] 2025-10-12 12:17:29,485 [wrapper] Pilot exit status: 0
[2025-10-12 14:17:29] 2025-10-12 12:17:29,491 [wrapper] pandaids: 6838851159
[2025-10-12 14:17:29] 2025-10-12 12:17:29,507 [wrapper] cleanup supervisor_pilot 2760659 2742073
[2025-10-12 14:17:29] 2025-10-12 12:17:29,509 [wrapper] Test setup, not cleaning
[2025-10-12 14:17:29] 2025-10-12 12:17:29,511 [wrapper] apfmon messages muted
[2025-10-12 14:17:29] 2025-10-12 12:17:29,514 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:17:29] 2025-10-12 12:17:29,516 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:17:29]  *** Error codes and diagnostics ***
[2025-10-12 14:17:29]     "exeErrorCode": 0,
[2025-10-12 14:17:29]     "exeErrorDiag": "",
[2025-10-12 14:17:29]     "pilotErrorCode": 0,
[2025-10-12 14:17:29]     "pilotErrorDiag": "",
[2025-10-12 14:17:29]  *** Listing of results directory ***
[2025-10-12 14:17:29] total 412564
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc    557409 Oct 11 21:02 pilot3.tar.gz
[2025-10-12 14:17:29] -rwx------ 1 boinc boinc     36292 Oct 11 21:29 runpilot2-wrapper.sh
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      5112 Oct 11 21:29 queuedata.json
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:17:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:52 run_atlas
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:52 job.xml
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc 219703319 Oct 12 12:52 EVNT.46676267._002550.pool.root.1
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc    569673 Oct 12 12:52 input.tar.gz
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:52 start_atlas.sh
[2025-10-12 14:17:29] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:52 shared
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:52 boinc_setup_complete
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      6442 Oct 12 12:52 init_data.xml
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:52 boinc_lockfile
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      2549 Oct 12 12:52 pandaJob.out
[2025-10-12 14:17:29] -rw------- 1 boinc boinc    975520 Oct 12 12:52 agis_schedconf.cvmfs.json
[2025-10-12 14:17:29] -rw------- 1 boinc boinc   1560580 Oct 12 12:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:17:29] drwx------ 5 boinc boinc      4096 Oct 12 12:53 pilot3
[2025-10-12 14:17:29] -rw------- 1 boinc boinc 196899755 Oct 12 14:16 HITS.46676269._063461.pool.root.1
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:16 boinc_task_state.xml
[2025-10-12 14:17:29] -rw------- 1 boinc boinc      1037 Oct 12 14:16 memory_monitor_summary.json
[2025-10-12 14:17:29] -rw------- 1 boinc boinc    246571 Oct 12 14:16 log.46676269._063461.job.log.tgz.1
[2025-10-12 14:17:29] -rw------- 1 boinc boinc      7769 Oct 12 14:16 heartbeat.json
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:17 boinc_mmap_file
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:17 wrapper_checkpoint.txt
[2025-10-12 14:17:29] -rw------- 1 boinc boinc       747 Oct 12 14:17 pilotlog.txt
[2025-10-12 14:17:29] -rw------- 1 boinc boinc        95 Oct 12 14:17 pilot_heartbeat.json
[2025-10-12 14:17:29] -rw------- 1 boinc boinc    738382 Oct 12 14:17 log.46676269._063461.job.log.1
[2025-10-12 14:17:29] -rw------- 1 boinc boinc       357 Oct 12 14:17 output.list
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:17 runtime_log
[2025-10-12 14:17:29] -rw------- 1 boinc boinc   1003520 Oct 12 14:17 result.tar.gz
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      8797 Oct 12 14:17 runtime_log.err
[2025-10-12 14:17:29] -rw------- 1 boinc boinc       662 Oct 12 14:17 G5jMDm5SuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZNhNDmsbCi8m.diag
[2025-10-12 14:17:29] -rw-r--r-- 1 boinc boinc      9114 Oct 12 14:17 stderr.txt
[2025-10-12 14:17:29] HITS file was successfully produced:
[2025-10-12 14:17:29] -rw------- 1 boinc boinc 196899755 Oct 12 14:16 shared/HITS.pool.root.1
[2025-10-12 14:17:29]  *** Contents of shared directory: ***
[2025-10-12 14:17:29] total 408408
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc 219703319 Oct 12 12:52 ATLAS.root_0
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc    569673 Oct 12 12:52 input.tar.gz
[2025-10-12 14:17:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:52 start_atlas.sh
[2025-10-12 14:17:29] -rw------- 1 boinc boinc 196899755 Oct 12 14:16 HITS.pool.root.1
[2025-10-12 14:17:29] -rw------- 1 boinc boinc   1003520 Oct 12 14:17 result.tar.gz
14:17:31 (2738353): run_atlas exited; CPU time 14412.481169
14:17:31 (2738353): called boinc_finish(0)

</stderr_txt>
]]>

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