Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:54:38 (2391339): wrapper (7.7.26015): starting
11:54:38 (2391339): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 11:54:38] Arguments: --nthreads 2
[2025-10-12 11:54:38] Threads: 2
[2025-10-12 11:54:38] Checking for CVMFS
[2025-10-12 11:54:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:54:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:54:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:54:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:54:38] 2.9.2.0 1442214 4094 60336 151615 0 57 27396334 36864001 0 130560 0 2491681 99.988 138384 794 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 11:54:38] CVMFS is ok
[2025-10-12 11:54:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:54:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:54:38] Further information can be found at the LHC@home message board.
[2025-10-12 11:54:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:54:38] Checking for apptainer binary...
[2025-10-12 11:54:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:54:38] Running /usr/bin/apptainer --version
[2025-10-12 11:54:38] apptainer version 1.4.1-1.1
[2025-10-12 11:54:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:54:38] belleA267a
[2025-10-12 11:54:38] apptainer works
[2025-10-12 11:54:38] Set ATHENA_PROC_NUMBER=2
[2025-10-12 11:54:38] Set ATHENA_CORE_NUMBER=2
[2025-10-12 11:54:38] Starting ATLAS job with PandaID=6838454850
[2025-10-12 11:54:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:58:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | -- intersect: -20095456795.593197
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | intersect: -20095456795.593197
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | chi2: 1.4831562920581007
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | sum of deviations: 5853195403.000001
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | mean x: 1760266397.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | mean y: 2291648.6086956523
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | -- intersect: -21846746172.066624
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | intersect: -21846746172.066624
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | chi2: 1.4853048809879192
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | current chi2=1.4853048809879192 (change=-0.1448659821843198 %)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | right removable region: 114
[2025-10-12 13:58:08] 2025-10-12 11:57:19,178 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | sum of deviations: -7333409874.000001
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | mean x: 1760266702.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | mean y: 2323328.5304347826
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | -- intersect: 27376768639.546303
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | intersect: 27376768639.546303
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | chi2: 0.09031572834839845
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | current chi2=0.09031572834839845 (change=93.91057241694523 %)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | sum of deviations: -2807985732.9999986
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | mean x: 1760266854.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | mean y: 2311592.5454545454
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | -- intersect: 11979443218.466848
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | intersect: 11979443218.466848
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | chi2: 0.046374801515935725
[2025-10-12 13:58:08] 2025-10-12 11:57:19,179 | INFO     | current chi2=0.046374801515935725 (change=48.65257429243986 %)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | sum of deviations: -68177260.00000016
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | mean x: 1760267007.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | mean y: 2303980.438095238
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | -- intersect: 336661553.7877253
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | intersect: 336661553.7877253
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | chi2: 0.0026309000564634956
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | current chi2=0.0026309000564634956 (change=94.32687586693078 %)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | sum of deviations: -362097098.00000006
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | mean x: 1760267159.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | mean y: 2304893.46
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | -- intersect: 2058047033.6282868
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | intersect: 2058047033.6282868
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | chi2: 0.002205458819186634
[2025-10-12 13:58:08] 2025-10-12 11:57:19,180 | INFO     | current chi2=0.002205458819186634 (change=16.170938771758124 %)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | left removable region: 40
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | sum of deviations: -693652136.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | mean x: 1760267586.5
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | mean y: 2305876.0135135134
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | -- intersect: 9721408167.847246
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | intersect: 9721408167.847246
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | chi2: 0.00113271452043658
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | -- intersect: 9721408167.847246
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | current memory leak: -5.52 B/s (using 74 data points, chi2=0.00)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | could have reported an average CPU frequency of 4465 MHz (8 samples)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | ..............................
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . Timing measurements:
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . get job = 0 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . initial setup = 1 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . payload setup = 6 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . stage-in = 0 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . payload execution = 7308 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . stage-out = 0 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | . log creation = 0 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,181 | INFO     | ..............................
[2025-10-12 13:58:08] 2025-10-12 11:57:19,568 | INFO     | 
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | job summary report
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | --------------------------------------------------
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | PanDA job id: 6838454850
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | task id: 46676269
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | errors: (none)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:58:08] 2025-10-12 11:57:19,569 | INFO     | pilot state: finished 
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | transexitcode: 0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | exeerrorcode: 0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | exeerrordiag: 
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | exitcode: 0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | exitmsg: OK
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | cpuconsumptiontime: 14213 s
[2025-10-12 13:58:08] 2025-10-12 11:57:19,570 | INFO     | nevents: 400
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | neventsw: 0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | pid: 2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | pgrp: 2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | corecount: 2
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | event service: False
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | sizes: {0: 2348860, 7: 2349122, 10: 2349150, 7318: 2376780, 7319: 2385784, 7320: 2385840, 7329: 2386162}
[2025-10-12 13:58:08] 2025-10-12 11:57:19,571 | INFO     | --------------------------------------------------
[2025-10-12 13:58:08] 2025-10-12 11:57:19,572 | INFO     | 
[2025-10-12 13:58:08] 2025-10-12 11:57:19,572 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 13:58:08] 2025-10-12 11:57:19,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | job 6838454850 has completed (purged errors)
[2025-10-12 13:58:08] 2025-10-12 11:57:19,584 | INFO     | overall cleanup function is called
[2025-10-12 13:58:08] 2025-10-12 11:57:20,589 | INFO     | --- collectZombieJob: --- 10, [2401459]
[2025-10-12 13:58:08] 2025-10-12 11:57:20,589 | INFO     | zombie collector waiting for pid 2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:20,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:58:08] 2025-10-12 11:57:20,590 | INFO     | collected zombie processes
[2025-10-12 13:58:08] 2025-10-12 11:57:20,590 | INFO     | will attempt to kill all subprocesses of pid=2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:20,622 | INFO     | process IDs to be killed: [2401459] (in reverse order)
[2025-10-12 13:58:08] 2025-10-12 11:57:20,644 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:58:08] 2025-10-12 11:57:20,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:58:08] 2025-10-12 11:57:20,647 | INFO     | did not find any defunct processes belonging to 2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:20,650 | INFO     | did not find any defunct processes belonging to 2401459
[2025-10-12 13:58:08] 2025-10-12 11:57:20,651 | INFO     | ready for new job
[2025-10-12 13:58:08] 2025-10-12 11:57:20,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:58:08] 2025-10-12 11:57:20,653 | INFO     | ***************************************
[2025-10-12 13:58:08] 2025-10-12 11:57:20,653 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:58:08] 2025-10-12 11:57:20,653 | INFO     | ***************************************
[2025-10-12 13:58:08] 2025-10-12 11:57:20,653 | INFO     | 
[2025-10-12 13:58:08] 2025-10-12 11:57:20,654 | INFO     | architecture information:
[2025-10-12 13:58:08] 2025-10-12 11:57:20,655 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:58:08] 2025-10-12 11:57:20,681 | INFO     | cat /etc/os-release:
[2025-10-12 13:58:08] NAME="CentOS Linux"
[2025-10-12 13:58:08] VERSION="7 (Core)"
[2025-10-12 13:58:08] ID="centos"
[2025-10-12 13:58:08] ID_LIKE="rhel fedora"
[2025-10-12 13:58:08] VERSION_ID="7"
[2025-10-12 13:58:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:58:08] ANSI_COLOR="0;31"
[2025-10-12 13:58:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:58:08] HOME_URL="https://www.centos.org/"
[2025-10-12 13:58:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:58:08] 
[2025-10-12 13:58:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:58:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:58:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:58:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:58:08] 
[2025-10-12 13:58:08] 2025-10-12 11:57:20,682 | INFO     | ***************************************
[2025-10-12 13:58:08] 2025-10-12 11:57:21,186 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 13:58:08] 2025-10-12 11:57:21,197 | INFO     | sufficient remaining disk space (333128400896 B)
[2025-10-12 13:58:08] 2025-10-12 11:57:21,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:58:08] 2025-10-12 11:57:21,197 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:58:08] 2025-10-12 11:57:21,198 | INFO     | update_server=False
[2025-10-12 13:58:08] 2025-10-12 11:57:21,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:58:08] 2025-10-12 11:57:21,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:58:08] 2025-10-12 11:57:21,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:58:08] 2025-10-12 11:57:21,198 | INFO     | aborting loop
[2025-10-12 13:58:08] 2025-10-12 11:57:21,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:58:08] 2025-10-12 11:57:22,198 | INFO     | all data control threads have been joined
[2025-10-12 13:58:08] 2025-10-12 11:57:22,203 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:22,203 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:22,204 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:22,257 | INFO     | all payload control threads have been joined
[2025-10-12 13:58:08] 2025-10-12 11:57:22,334 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:22,560 | INFO     | all job control threads have been joined
[2025-10-12 13:58:08] 2025-10-12 11:57:22,798 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:22,955 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,025 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,204 | INFO     | [data] control thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,263 | INFO     | [payload] control thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,566 | INFO     | [job] control thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,646 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,668 | INFO     | [job] validate thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,686 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:23,732 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:24,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:58:08] 2025-10-12 11:57:28,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:31,314 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:58:08] 2025-10-12 11:57:32,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:58:08] 2025-10-12 11:57:51,006 | INFO     | PID=2395046 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:58:08] 2025-10-12 11:57:51,006 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:58:08] 2025-10-12 11:57:51,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:58:08] 2025-10-12 11:57:51,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:58:08] 2025-10-12 11:58:02,079 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:58:08] 2025-10-12 11:58:03,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147693524800)>', '<ExcThread(monitor, started 140146888386304)>']
[2025-10-12 13:58:08] 2025-10-12 11:58:04,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:58:08] 2025-10-12 11:58:04,075 | INFO     | [monitor] control thread has ended
[2025-10-12 13:58:08] 2025-10-12 11:58:08,374 | INFO     | all workflow threads have been joined
[2025-10-12 13:58:08] 2025-10-12 11:58:08,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:58:08] 2025-10-12 11:58:08,375 | INFO     | traces error code: 0
[2025-10-12 13:58:08] 2025-10-12 11:58:08,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:58:08] 2025-10-12 11:58:08,418 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:58:08] 2025-10-12 11:58:08,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:58:08] 2025-10-12 11:58:08,423 [wrapper] pilotpid: 2395046
[2025-10-12 13:58:08] 2025-10-12 11:58:08,425 [wrapper] Pilot exit status: 0
[2025-10-12 13:58:08] 2025-10-12 11:58:08,432 [wrapper] pandaids: 6838454850
[2025-10-12 13:58:08] 2025-10-12 11:58:08,445 [wrapper] cleanup supervisor_pilot 2416216 2395047
[2025-10-12 13:58:08] 2025-10-12 11:58:08,447 [wrapper] Test setup, not cleaning
[2025-10-12 13:58:08] 2025-10-12 11:58:08,449 [wrapper] apfmon messages muted
[2025-10-12 13:58:08] 2025-10-12 11:58:08,451 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:58:08] 2025-10-12 11:58:08,453 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:58:08]  *** Error codes and diagnostics ***
[2025-10-12 13:58:08]     "exeErrorCode": 0,
[2025-10-12 13:58:08]     "exeErrorDiag": "",
[2025-10-12 13:58:08]     "pilotErrorCode": 0,
[2025-10-12 13:58:08]     "pilotErrorDiag": "",
[2025-10-12 13:58:08]  *** Listing of results directory ***
[2025-10-12 13:58:08] total 410460
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:50 queuedata.json
[2025-10-12 13:58:08] -rwx------ 1 boinc boinc     36292 Oct 11 16:50 runpilot2-wrapper.sh
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:58:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:54 run_atlas
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:54 job.xml
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc 219581804 Oct 12 11:54 EVNT.46676267._002403.pool.root.1
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:54 input.tar.gz
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:54 start_atlas.sh
[2025-10-12 13:58:08] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:54 shared
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:54 boinc_setup_complete
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc      6209 Oct 12 11:54 init_data.xml
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:54 boinc_lockfile
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:54 pandaJob.out
[2025-10-12 13:58:08] -rw------- 1 boinc boinc    975536 Oct 12 11:54 agis_schedconf.cvmfs.json
[2025-10-12 13:58:08] -rw------- 1 boinc boinc   1560580 Oct 12 11:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:58:08] drwx------ 5 boinc boinc      4096 Oct 12 11:54 pilot3
[2025-10-12 13:58:08] -rw------- 1 boinc boinc 194141026 Oct 12 13:56 HITS.46676269._059536.pool.root.1
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc       530 Oct 12 13:56 boinc_task_state.xml
[2025-10-12 13:58:08] -rw------- 1 boinc boinc      1019 Oct 12 13:57 memory_monitor_summary.json
[2025-10-12 13:58:08] -rw------- 1 boinc boinc    275333 Oct 12 13:57 log.46676269._059536.job.log.tgz.1
[2025-10-12 13:58:08] -rw------- 1 boinc boinc      7760 Oct 12 13:57 heartbeat.json
[2025-10-12 13:58:08] -rw------- 1 boinc boinc        95 Oct 12 13:57 pilot_heartbeat.json
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:58 boinc_mmap_file
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:58 wrapper_checkpoint.txt
[2025-10-12 13:58:08] -rw------- 1 boinc boinc      4824 Oct 12 13:58 pilotlog.txt
[2025-10-12 13:58:08] -rw------- 1 boinc boinc   1062986 Oct 12 13:58 log.46676269._059536.job.log.1
[2025-10-12 13:58:08] -rw------- 1 boinc boinc       357 Oct 12 13:58 output.list
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:58 runtime_log
[2025-10-12 13:58:08] -rw------- 1 boinc boinc   1361920 Oct 12 13:58 result.tar.gz
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc      8797 Oct 12 13:58 runtime_log.err
[2025-10-12 13:58:08] -rw------- 1 boinc boinc       663 Oct 12 13:58 DGgNDmx6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmX5RMDm3qqgDo.diag
[2025-10-12 13:58:08] -rw-r--r-- 1 boinc boinc     20876 Oct 12 13:58 stderr.txt
[2025-10-12 13:58:08] HITS file was successfully produced:
[2025-10-12 13:58:08] -rw------- 1 boinc boinc 194141026 Oct 12 13:56 shared/HITS.pool.root.1
[2025-10-12 13:58:08]  *** Contents of shared directory: ***
[2025-10-12 13:58:08] total 405944
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc 219581804 Oct 12 11:54 ATLAS.root_0
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:54 input.tar.gz
[2025-10-12 13:58:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:54 start_atlas.sh
[2025-10-12 13:58:08] -rw------- 1 boinc boinc 194141026 Oct 12 13:56 HITS.pool.root.1
[2025-10-12 13:58:08] -rw------- 1 boinc boinc   1361920 Oct 12 13:58 result.tar.gz
13:58:10 (2391339): run_atlas exited; CPU time 14239.714057
13:58:10 (2391339): called boinc_finish(0)

</stderr_txt>
]]>

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