Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:29:18 (1888618): wrapper (7.7.26015): starting
22:29:18 (1888618): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:29:18] Arguments: --nthreads 8
[2025-10-11 22:29:18] Threads: 8
[2025-10-11 22:29:18] Checking for CVMFS
[2025-10-11 22:29:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:29:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:29:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:29:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:29:19] 2.13.2.0 133490 115376 151804 151604 0 292 35282165 39288832 8757 16776704 0 65784798 99.730 42383352 34697 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:29:19] CVMFS is ok
[2025-10-11 22:29:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:29:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:29:20] Further information can be found at the LHC@home message board.
[2025-10-11 22:29:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:29:20] Checking for apptainer binary...
[2025-10-11 22:29:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:29:20] Running /usr/bin/apptainer --version
[2025-10-11 22:29:20] apptainer version 1.4.3-1.el9
[2025-10-11 22:29:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:29:21] c-210-28.aglt2.org
[2025-10-11 22:29:21] apptainer works
[2025-10-11 22:29:21] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:29:21] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:29:21] Starting ATLAS job with PandaID=6838633148
[2025-10-11 22:29:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:56:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:56:41] 2025-10-12 12:56:02,945 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 08:56:41] 2025-10-12 12:56:02,953 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1801000000005
[2025-10-12 08:56:41] 2025-10-12 12:56:02,960 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838633148/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:56:41] 2025-10-12 12:56:02,961 | INFO     | extracted standard info from prmon json
[2025-10-12 08:56:41] 2025-10-12 12:56:02,962 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:56:41] 2025-10-12 12:56:02,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:56:41] 2025-10-12 12:56:02,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:56:41] 2025-10-12 12:56:02,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:56:41] 2025-10-12 12:56:02,976 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:56:41] 2025-10-12 12:56:02,977 | INFO     | sum of square deviations: 72125287794.8685
[2025-10-12 08:56:41] 2025-10-12 12:56:02,988 | INFO     | sum of deviations: -193658371370.7562
[2025-10-12 08:56:41] 2025-10-12 12:56:02,989 | INFO     | mean x: 1760254976.0146341
[2025-10-12 08:56:41] 2025-10-12 12:56:02,989 | INFO     | mean y: 2542237.5284552844
[2025-10-12 08:56:41] 2025-10-12 12:56:02,989 | INFO     | -- intersect: 4728875015.870822
[2025-10-12 08:56:41] 2025-10-12 12:56:02,989 | INFO     | intersect: 4728875015.870822
[2025-10-12 08:56:41] 2025-10-12 12:56:02,990 | INFO     | chi2: 3.0381363191714548
[2025-10-12 08:56:41] 2025-10-12 12:56:02,992 | INFO     | sum of square deviations: 70380674509.96886
[2025-10-12 08:56:41] 2025-10-12 12:56:03,003 | INFO     | sum of deviations: -154205829652.66373
[2025-10-12 08:56:41] 2025-10-12 12:56:03,004 | INFO     | mean x: 1760254823.529508
[2025-10-12 08:56:41] 2025-10-12 12:56:03,004 | INFO     | mean y: 2545663.2868852457
[2025-10-12 08:56:41] 2025-10-12 12:56:03,004 | INFO     | -- intersect: 3859308295.250912
[2025-10-12 08:56:41] 2025-10-12 12:56:03,004 | INFO     | intersect: 3859308295.250912
[2025-10-12 08:56:41] 2025-10-12 12:56:03,005 | INFO     | chi2: 2.3545695708932106
[2025-10-12 08:56:41] 2025-10-12 12:56:03,005 | INFO     | current chi2=2.3545695708932106 (change=22.499541708012067 %)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,006 | INFO     | right removable region: 609
[2025-10-12 08:56:41] 2025-10-12 12:56:03,007 | INFO     | sum of square deviations: 70379956231.90811
[2025-10-12 08:56:41] 2025-10-12 12:56:03,018 | INFO     | sum of deviations: -295755849602.0129
[2025-10-12 08:56:41] 2025-10-12 12:56:03,019 | INFO     | mean x: 1760255128.5311475
[2025-10-12 08:56:41] 2025-10-12 12:56:03,019 | INFO     | mean y: 2551127.790163934
[2025-10-12 08:56:41] 2025-10-12 12:56:03,019 | INFO     | -- intersect: 7399625222.8576355
[2025-10-12 08:56:41] 2025-10-12 12:56:03,019 | INFO     | intersect: 7399625222.8576355
[2025-10-12 08:56:41] 2025-10-12 12:56:03,020 | INFO     | chi2: 1.4719911196056121
[2025-10-12 08:56:41] 2025-10-12 12:56:03,020 | INFO     | current chi2=1.4719911196056121 (change=51.54953678948 %)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,021 | INFO     | sum of square deviations: 68663071597.79481
[2025-10-12 08:56:41] 2025-10-12 12:56:03,032 | INFO     | sum of deviations: -272144991236.66107
[2025-10-12 08:56:41] 2025-10-12 12:56:03,033 | INFO     | mean x: 1760255281.0446281
[2025-10-12 08:56:41] 2025-10-12 12:56:03,033 | INFO     | mean y: 2549026.9504132234
[2025-10-12 08:56:41] 2025-10-12 12:56:03,033 | INFO     | -- intersect: 6979292812.026898
[2025-10-12 08:56:41] 2025-10-12 12:56:03,033 | INFO     | intersect: 6979292812.026898
[2025-10-12 08:56:41] 2025-10-12 12:56:03,034 | INFO     | chi2: 1.4396718757337519
[2025-10-12 08:56:41] 2025-10-12 12:56:03,034 | INFO     | current chi2=1.4396718757337519 (change=2.1956140523809333 %)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,035 | INFO     | left removable region: 20
[2025-10-12 08:56:41] 2025-10-12 12:56:03,036 | INFO     | sum of square deviations: 63358322084.41768
[2025-10-12 08:56:41] 2025-10-12 12:56:03,046 | INFO     | sum of deviations: -170390181710.9762
[2025-10-12 08:56:41] 2025-10-12 12:56:03,046 | INFO     | mean x: 1760255403.0662138
[2025-10-12 08:56:41] 2025-10-12 12:56:03,047 | INFO     | mean y: 2546787.5891341255
[2025-10-12 08:56:41] 2025-10-12 12:56:03,047 | INFO     | -- intersect: 4736419594.172573
[2025-10-12 08:56:41] 2025-10-12 12:56:03,047 | INFO     | intersect: 4736419594.172573
[2025-10-12 08:56:41] 2025-10-12 12:56:03,048 | INFO     | chi2: 0.6326731090079991
[2025-10-12 08:56:41] 2025-10-12 12:56:03,048 | INFO     | -- intersect: 4736419594.172573
[2025-10-12 08:56:41] 2025-10-12 12:56:03,048 | INFO     | current memory leak: -2.69 B/s (using 589 data points, chi2=0.63)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,049 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | ..............................
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | . Timing measurements:
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | . get job = 0 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | . initial setup = 4 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | . payload setup = 9 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,050 | INFO     | . stage-in = 0 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,051 | INFO     | . payload execution = 37499 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,051 | INFO     | . stage-out = 5 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,051 | INFO     | . log creation = 0 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,051 | INFO     | ..............................
[2025-10-12 08:56:41] 2025-10-12 12:56:03,201 | INFO     | 
[2025-10-12 08:56:41] 2025-10-12 12:56:03,201 | INFO     | job summary report
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | --------------------------------------------------
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | PanDA job id: 6838633148
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | task id: 46676269
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | errors: (none)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | pilot state: finished 
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | transexitcode: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | exeerrorcode: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:03,202 | INFO     | exeerrordiag: 
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | exitcode: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | exitmsg: OK
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | cpuconsumptiontime: 53973 s
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | nevents: 400
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | neventsw: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | pid: 1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | pgrp: 1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | corecount: 8
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | event service: False
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 14: 2349174, 23: 2349202, 37515: 2389804, 37523: 2398802, 37525: 2398858, 37534: 2399052}
[2025-10-12 08:56:41] 2025-10-12 12:56:03,203 | INFO     | --------------------------------------------------
[2025-10-12 08:56:41] 2025-10-12 12:56:03,204 | INFO     | 
[2025-10-12 08:56:41] 2025-10-12 12:56:03,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:56:41] 2025-10-12 12:56:03,266 | INFO     | time since job start (37567s) is within the limit (172800.0s)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | job 6838633148 has completed (purged errors)
[2025-10-12 08:56:41] 2025-10-12 12:56:03,323 | INFO     | overall cleanup function is called
[2025-10-12 08:56:41] 2025-10-12 12:56:04,333 | INFO     | --- collectZombieJob: --- 10, [1900092]
[2025-10-12 08:56:41] 2025-10-12 12:56:04,333 | INFO     | zombie collector waiting for pid 1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:04,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:56:41] 2025-10-12 12:56:04,334 | INFO     | collected zombie processes
[2025-10-12 08:56:41] 2025-10-12 12:56:04,334 | INFO     | will attempt to kill all subprocesses of pid=1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:05,716 | INFO     | PID=1892307 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:56:41] 2025-10-12 12:56:05,716 | INFO     | .. there are 7 such processes running
[2025-10-12 08:56:41] 2025-10-12 12:56:05,755 | INFO     | process IDs to be killed: [1900092] (in reverse order)
[2025-10-12 08:56:41] 2025-10-12 12:56:05,842 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:56:41] 2025-10-12 12:56:05,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:56:41] 2025-10-12 12:56:05,903 | INFO     | did not find any defunct processes belonging to 1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:05,945 | INFO     | did not find any defunct processes belonging to 1900092
[2025-10-12 08:56:41] 2025-10-12 12:56:05,945 | INFO     | ready for new job
[2025-10-12 08:56:41] 2025-10-12 12:56:05,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:56:41] 2025-10-12 12:56:05,958 | INFO     | ***************************************
[2025-10-12 08:56:41] 2025-10-12 12:56:05,959 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:56:41] 2025-10-12 12:56:05,959 | INFO     | ***************************************
[2025-10-12 08:56:41] 2025-10-12 12:56:05,959 | INFO     | 
[2025-10-12 08:56:41] 2025-10-12 12:56:05,997 | INFO     | architecture information:
[2025-10-12 08:56:41] 2025-10-12 12:56:05,998 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:56:41] 2025-10-12 12:56:06,017 | INFO     | cat /etc/os-release:
[2025-10-12 08:56:41] NAME="CentOS Linux"
[2025-10-12 08:56:41] VERSION="7 (Core)"
[2025-10-12 08:56:41] ID="centos"
[2025-10-12 08:56:41] ID_LIKE="rhel fedora"
[2025-10-12 08:56:41] VERSION_ID="7"
[2025-10-12 08:56:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:56:41] ANSI_COLOR="0;31"
[2025-10-12 08:56:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:56:41] HOME_URL="https://www.centos.org/"
[2025-10-12 08:56:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:56:41] 
[2025-10-12 08:56:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:56:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:56:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:56:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:56:41] 
[2025-10-12 08:56:41] 2025-10-12 12:56:06,018 | INFO     | ***************************************
[2025-10-12 08:56:41] 2025-10-12 12:56:06,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:56:41] 2025-10-12 12:56:06,728 | INFO     | sufficient remaining disk space (53028585472 B)
[2025-10-12 08:56:41] 2025-10-12 12:56:06,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:56:41] 2025-10-12 12:56:06,729 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:56:41] 2025-10-12 12:56:06,729 | INFO     | update_server=False
[2025-10-12 08:56:41] 2025-10-12 12:56:06,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:56:41] 2025-10-12 12:56:06,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:56:41] 2025-10-12 12:56:06,730 | INFO     | aborting loop
[2025-10-12 08:56:41] 2025-10-12 12:56:07,404 | INFO     | all payload control threads have been joined
[2025-10-12 08:56:41] 2025-10-12 12:56:07,599 | INFO     | all data control threads have been joined
[2025-10-12 08:56:41] 2025-10-12 12:56:07,735 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:07,742 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:07,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:07,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:56:41] 2025-10-12 12:56:08,015 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,020 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,147 | INFO     | all job control threads have been joined
[2025-10-12 08:56:41] 2025-10-12 12:56:08,181 | INFO     | [job] validate thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:56:41] 2025-10-12 12:56:08,410 | INFO     | [payload] control thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,498 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,612 | INFO     | [data] control thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,626 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,776 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:08,837 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:09,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:56:41] 2025-10-12 12:56:09,153 | INFO     | [job] control thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:09,229 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:09,966 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:12,798 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:56:41] 2025-10-12 12:56:13,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:56:41] 2025-10-12 12:56:14,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485761742656)>', '<ExcThread(monitor, started 140485259671296)>']
[2025-10-12 08:56:41] 2025-10-12 12:56:19,451 | INFO     | all workflow threads have been joined
[2025-10-12 08:56:41] 2025-10-12 12:56:19,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:56:41] 2025-10-12 12:56:19,452 | INFO     | traces error code: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:19,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:56:41] 2025-10-12 12:56:38,414 | INFO     | PID=1892307 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:56:41] 2025-10-12 12:56:38,414 | INFO     | .. there are 7 such processes running
[2025-10-12 08:56:41] 2025-10-12 12:56:38,415 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:56:41] 2025-10-12 12:56:38,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:56:41] 2025-10-12 12:56:38,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:56:41] 2025-10-12 12:56:38,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:56:41] 2025-10-12 12:56:38,415 | INFO     | [monitor] control thread has ended
[2025-10-12 08:56:41] 2025-10-12 12:56:41,092 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:56:41] 2025-10-12 12:56:41,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:56:41] 2025-10-12 12:56:41,250 [wrapper] pilotpid: 1892307
[2025-10-12 08:56:41] 2025-10-12 12:56:41,320 [wrapper] Pilot exit status: 0
[2025-10-12 08:56:41] 2025-10-12 12:56:41,526 [wrapper] pandaids: 6838633148
[2025-10-12 08:56:41] 2025-10-12 12:56:41,589 [wrapper] cleanup supervisor_pilot 2752478 1892308
[2025-10-12 08:56:41] 2025-10-12 12:56:41,593 [wrapper] Test setup, not cleaning
[2025-10-12 08:56:41] 2025-10-12 12:56:41,597 [wrapper] apfmon messages muted
[2025-10-12 08:56:41] 2025-10-12 12:56:41,600 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:56:41] 2025-10-12 12:56:41,604 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:56:41]  *** Error codes and diagnostics ***
[2025-10-12 08:56:41]     "exeErrorCode": 0,
[2025-10-12 08:56:41]     "exeErrorDiag": "",
[2025-10-12 08:56:41]     "pilotErrorCode": 0,
[2025-10-12 08:56:41]     "pilotErrorDiag": "",
[2025-10-12 08:56:41]  *** Listing of results directory ***
[2025-10-12 08:56:41] total 415556
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 08:56:41] -rwx------. 1 boincer umatlas     36292 Oct 11 12:55 runpilot2-wrapper.sh
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:55 queuedata.json
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:56:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:29 run_atlas
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:29 job.xml
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas 221669740 Oct 11 22:29 EVNT.46676267._002464.pool.root.1
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:29 start_atlas.sh
[2025-10-12 08:56:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:29 shared
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 22:29 input.tar.gz
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:29 boinc_lockfile
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 22:29 pandaJob.out
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas    975496 Oct 11 22:29 agis_schedconf.cvmfs.json
[2025-10-12 08:56:41] drwx------. 5 boincer umatlas      4096 Oct 11 22:29 pilot3
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 08:47 init_data.xml
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas 189904137 Oct 12 08:54 HITS.46676269._061357.pool.root.1
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:54 boinc_task_state.xml
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas      1042 Oct 12 08:55 memory_monitor_summary.json
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas    716385 Oct 12 08:55 log.46676269._061357.job.log.tgz.1
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas        95 Oct 12 08:55 pilot_heartbeat.json
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas      7829 Oct 12 08:56 heartbeat.json
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:56 boinc_mmap_file
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas        28 Oct 12 08:56 wrapper_checkpoint.txt
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas       822 Oct 12 08:56 pilotlog.txt
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas   4312564 Oct 12 08:56 log.46676269._061357.job.log.1
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas       357 Oct 12 08:56 output.list
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:56 runtime_log
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas   5048320 Oct 12 08:56 result.tar.gz
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas       658 Oct 12 08:56 UCZNDmw3rR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQGSMDmF0XxVn.diag
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 08:56 runtime_log.err
[2025-10-12 08:56:41] -rw-r--r--. 1 boincer umatlas     21277 Oct 12 08:56 stderr.txt
[2025-10-12 08:56:41] HITS file was successfully produced:
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas 189904137 Oct 12 08:54 shared/HITS.pool.root.1
[2025-10-12 08:56:41]  *** Contents of shared directory: ***
[2025-10-12 08:56:41] total 407444
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas 221669740 Oct 11 22:29 ATLAS.root_0
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:29 start_atlas.sh
[2025-10-12 08:56:41] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 22:29 input.tar.gz
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas 189904137 Oct 12 08:54 HITS.pool.root.1
[2025-10-12 08:56:41] -rw-------. 1 boincer umatlas   5048320 Oct 12 08:56 result.tar.gz
08:56:43 (1888618): run_atlas exited; CPU time 54827.334392
08:56:43 (1888618): called boinc_finish(0)

</stderr_txt>
]]>

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