Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:47:05 (1054670): wrapper (7.7.26015): starting
06:47:05 (1054670): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 06:47:05] Arguments: --nthreads 4
[2025-10-12 06:47:05] Threads: 4
[2025-10-12 06:47:05] Checking for CVMFS
[2025-10-12 06:47:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:47:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:47:05] 2.13.2.0 428253 3894 52860 151608 1 188 2067987 4096000 2766 130560 0 13047303 99.997 255742 2588 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 06:47:05] CVMFS is ok
[2025-10-12 06:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:47:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 06:47:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 06:47:05] Further information can be found at the LHC@home message board.
[2025-10-12 06:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:47:05] Checking for apptainer binary...
[2025-10-12 06:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:47:05] Running /usr/bin/apptainer --version
[2025-10-12 06:47:05] apptainer version 1.4.2
[2025-10-12 06:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:47:05] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-12 06:47:05] apptainer works
[2025-10-12 06:47:05] Set ATHENA_PROC_NUMBER=4
[2025-10-12 06:47:05] Set ATHENA_CORE_NUMBER=4
[2025-10-12 06:47:05] Starting ATLAS job with PandaID=6838632272
[2025-10-12 06:47:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:06:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:06:44]  workdir=None
[2025-10-12 08:06:44] ]
[2025-10-12 08:06:44] 2025-10-12 06:05:03,735 | INFO     | transferring file log.46676269._060802.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-6838632272/log.46676269._060802.job.log.tgz.1 to /var/lib/boin
[2025-10-12 08:06:44] 2025-10-12 06:05:03,735 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-6838632272/log.46676269._060802.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4667
[2025-10-12 08:06:44] 2025-10-12 06:05:03,784 | INFO     | adding to output.list: log.46676269._060802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/6d/log.46676269._060802.job.log.tg
[2025-10-12 08:06:44] 2025-10-12 06:05:03,785 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 08:06:44] 2025-10-12 06:05:03,785 | INFO     | summary of transferred files:
[2025-10-12 08:06:44] 2025-10-12 06:05:03,785 | INFO     |  -- lfn=log.46676269._060802.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 08:06:44] 2025-10-12 06:05:03,785 | INFO     | stage-out finished correctly
[2025-10-12 08:06:44] 2025-10-12 06:05:04,172 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:06:44] 2025-10-12 06:05:04,718 | INFO     | time since job start (4672s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:05,105 | INFO     | monitor loop #358: job 0:6838632272 is in state 'finished'
[2025-10-12 08:06:44] 2025-10-12 06:05:05,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:06:44] 2025-10-12 06:05:05,528 | INFO     | job 6838632272 has state=finished
[2025-10-12 08:06:44] 2025-10-12 06:05:05,528 | INFO     | preparing for final server update for job 6838632272 in state='finished'
[2025-10-12 08:06:44] 2025-10-12 06:05:05,529 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:06:44] 2025-10-12 06:05:05,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:06:44] 2025-10-12 06:05:05,529 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:06:44] 2025-10-12 06:05:05,529 | INFO     | job 6838632272 has finished - writing final server update
[2025-10-12 08:06:44] 2025-10-12 06:05:05,529 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:06:44] 2025-10-12 06:05:05,545 | INFO     | executing command: lscpu
[2025-10-12 08:06:44] 2025-10-12 06:05:05,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:06:44] 2025-10-12 06:05:05,822 | INFO     | PID=1058517 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:06:44] 2025-10-12 06:05:05,822 | INFO     | .. there are 4 such processes running
[2025-10-12 08:06:44] 2025-10-12 06:05:06,823 | INFO     | time since job start (4674s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:07,608 | INFO     | monitor loop #359: job 0:6838632272 is in state 'finished'
[2025-10-12 08:06:44] 2025-10-12 06:05:07,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:06:44] 2025-10-12 06:05:08,828 | INFO     | time since job start (4676s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:10,112 | INFO     | monitor loop #360: job 0:6838632272 is in state 'finished'
[2025-10-12 08:06:44] 2025-10-12 06:05:10,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:06:44] 2025-10-12 06:05:10,834 | INFO     | time since job start (4678s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:12,615 | INFO     | monitor loop #361: job 0:6838632272 is in state 'finished'
[2025-10-12 08:06:44] 2025-10-12 06:05:12,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:06:44] 2025-10-12 06:05:12,838 | INFO     | time since job start (4680s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:14,843 | INFO     | time since job start (4682s) is within the limit (172800.0s)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,031 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 08:06:44] 2025-10-12 06:05:15,033 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4587.862343749999
[2025-10-12 08:06:44] 2025-10-12 06:05:15,036 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6838632272/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,037 | INFO     | extracted standard info from prmon json
[2025-10-12 08:06:44] 2025-10-12 06:05:15,037 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:06:44] 2025-10-12 06:05:15,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:06:44] 2025-10-12 06:05:15,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:06:44] 2025-10-12 06:05:15,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | sum of deviations: -4659399508.500001
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | mean x: 1760246862.5
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | mean y: 2373961.1285714284
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | -- intersect: 77131715717.20157
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | intersect: 77131715717.20157
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | chi2: 0.019577448792231496
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | -- intersect: 77131715717.20157
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | current memory leak: -43.82 B/s (using 70 data points, chi2=0.02)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | could have reported an average CPU frequency of 4587 MHz (6 samples)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | ..............................
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | . Timing measurements:
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | . get job = 0 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | . initial setup = 1 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | . payload setup = 3 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,038 | INFO     | . stage-in = 0 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,039 | INFO     | . payload execution = 4650 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,039 | INFO     | . stage-out = 0 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,039 | INFO     | . log creation = 0 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,039 | INFO     | ..............................
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | 
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | job summary report
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | --------------------------------------------------
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | PanDA job id: 6838632272
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | task id: 46676269
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | errors: (none)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | pilot state: finished 
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | transexitcode: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | exeerrorcode: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | exeerrordiag: 
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | exitcode: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | exitmsg: OK
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | cpuconsumptiontime: 17977 s
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | nevents: 400
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | neventsw: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | pid: 1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | pgrp: 1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | corecount: 4
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | event service: False
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | sizes: {0: 2348865, 2: 2349127, 11: 2349155, 4657: 2375478, 4658: 2384548, 4669: 2384686}
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | --------------------------------------------------
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | 
[2025-10-12 08:06:44] 2025-10-12 06:05:15,082 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | job 6838632272 has completed (purged errors)
[2025-10-12 08:06:44] 2025-10-12 06:05:15,114 | INFO     | overall cleanup function is called
[2025-10-12 08:06:44] 2025-10-12 06:05:16,120 | INFO     | --- collectZombieJob: --- 10, [1065171]
[2025-10-12 08:06:44] 2025-10-12 06:05:16,120 | INFO     | zombie collector waiting for pid 1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:16,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:06:44] 2025-10-12 06:05:16,121 | INFO     | collected zombie processes
[2025-10-12 08:06:44] 2025-10-12 06:05:16,121 | INFO     | will attempt to kill all subprocesses of pid=1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:16,196 | INFO     | process IDs to be killed: [1065171] (in reverse order)
[2025-10-12 08:06:44] 2025-10-12 06:05:16,248 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:06:44] 2025-10-12 06:05:16,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:06:44] 2025-10-12 06:05:16,251 | INFO     | did not find any defunct processes belonging to 1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:16,253 | INFO     | did not find any defunct processes belonging to 1065171
[2025-10-12 08:06:44] 2025-10-12 06:05:16,253 | INFO     | ready for new job
[2025-10-12 08:06:44] 2025-10-12 06:05:16,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:06:44] 2025-10-12 06:05:16,254 | INFO     | ***************************************
[2025-10-12 08:06:44] 2025-10-12 06:05:16,254 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:06:44] 2025-10-12 06:05:16,254 | INFO     | ***************************************
[2025-10-12 08:06:44] 2025-10-12 06:05:16,254 | INFO     | 
[2025-10-12 08:06:44] 2025-10-12 06:05:16,255 | INFO     | architecture information:
[2025-10-12 08:06:44] 2025-10-12 06:05:16,256 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:06:44] 2025-10-12 06:05:16,280 | INFO     | cat /etc/os-release:
[2025-10-12 08:06:44] NAME="CentOS Linux"
[2025-10-12 08:06:44] VERSION="7 (Core)"
[2025-10-12 08:06:44] ID="centos"
[2025-10-12 08:06:44] ID_LIKE="rhel fedora"
[2025-10-12 08:06:44] VERSION_ID="7"
[2025-10-12 08:06:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:06:44] ANSI_COLOR="0;31"
[2025-10-12 08:06:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:06:44] HOME_URL="https://www.centos.org/"
[2025-10-12 08:06:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:06:44] 
[2025-10-12 08:06:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:06:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:06:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:06:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:06:44] 
[2025-10-12 08:06:44] 2025-10-12 06:05:16,280 | INFO     | ***************************************
[2025-10-12 08:06:44] 2025-10-12 06:05:16,783 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2025-10-12 08:06:44] 2025-10-12 06:05:16,851 | INFO     | sufficient remaining disk space (1766274891776 B)
[2025-10-12 08:06:44] 2025-10-12 06:05:16,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:06:44] 2025-10-12 06:05:16,852 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:06:44] 2025-10-12 06:05:16,852 | INFO     | update_server=False
[2025-10-12 08:06:44] 2025-10-12 06:05:16,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:06:44] 2025-10-12 06:05:16,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:06:44] 2025-10-12 06:05:16,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:06:44] 2025-10-12 06:05:16,853 | INFO     | aborting loop
[2025-10-12 08:06:44] 2025-10-12 06:05:16,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:06:44] 2025-10-12 06:05:17,080 | INFO     | all payload control threads have been joined
[2025-10-12 08:06:44] 2025-10-12 06:05:17,598 | INFO     | all data control threads have been joined
[2025-10-12 08:06:44] 2025-10-12 06:05:17,857 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:17,858 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:17,858 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:17,858 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:17,885 | INFO     | all job control threads have been joined
[2025-10-12 08:06:44] 2025-10-12 06:05:17,904 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,085 | INFO     | [payload] control thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,124 | INFO     | [job] validate thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,181 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,323 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,447 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,603 | INFO     | [data] control thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,858 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,890 | INFO     | [job] control thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:18,982 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:19,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:06:44] 2025-10-12 06:05:19,877 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:06:44] 2025-10-12 06:05:23,236 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:26,914 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:06:44] 2025-10-12 06:05:27,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:06:44] 2025-10-12 06:05:29,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139214418442048)>', '<ExcThread(monitor, started 139213580269312)>']
[2025-10-12 08:06:44] 2025-10-12 06:05:34,669 | INFO     | all workflow threads have been joined
[2025-10-12 08:06:44] 2025-10-12 06:05:34,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:06:44] 2025-10-12 06:05:34,670 | INFO     | traces error code: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:34,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:06:44] 2025-10-12 06:05:47,940 | INFO     | PID=1058517 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:06:44] 2025-10-12 06:05:47,940 | INFO     | .. there are 4 such processes running
[2025-10-12 08:06:44] 2025-10-12 06:05:47,941 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:06:44] 2025-10-12 06:05:47,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:06:44] 2025-10-12 06:05:47,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:06:44] 2025-10-12 06:05:47,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:06:44] 2025-10-12 06:05:47,941 | INFO     | [monitor] control thread has ended
[2025-10-12 08:06:44] 2025-10-12 06:05:48,032 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:06:44] 2025-10-12 06:05:48,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:06:44] 2025-10-12 06:05:48,039 [wrapper] pilotpid: 1058517
[2025-10-12 08:06:44] 2025-10-12 06:05:48,043 [wrapper] Pilot exit status: 0
[2025-10-12 08:06:44] 2025-10-12 06:05:48,082 [wrapper] pandaids: 6838632272
[2025-10-12 08:06:44] 2025-10-12 06:05:48,122 [wrapper] cleanup supervisor_pilot 1148616 1058518
[2025-10-12 08:06:44] 2025-10-12 06:05:48,128 [wrapper] Test setup, not cleaning
[2025-10-12 08:06:44] 2025-10-12 06:05:48,139 [wrapper] apfmon messages muted
[2025-10-12 08:06:44] 2025-10-12 06:05:48,145 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:06:44] 2025-10-12 06:05:48,157 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:06:44]  *** Error codes and diagnostics ***
[2025-10-12 08:06:44]     "exeErrorCode": 0,
[2025-10-12 08:06:44]     "exeErrorDiag": "",
[2025-10-12 08:06:44]     "pilotErrorCode": 0,
[2025-10-12 08:06:44]     "pilotErrorDiag": "",
[2025-10-12 08:06:44]  *** Listing of results directory ***
[2025-10-12 08:06:44] total 408004
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:50 pilot3.tar.gz
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:18 queuedata.json
[2025-10-12 08:06:44] -rwx------ 1 boinc boinc     36292 Oct 11 18:19 runpilot2-wrapper.sh
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc       100 Oct 12 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:06:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 06:47 run_atlas
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc       105 Oct 12 06:47 job.xml
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc 219205603 Oct 12 06:47 EVNT.46676267._002442.pool.root.1
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 08:06:44] drwxrwx--x 2 boinc boinc      4096 Oct 12 06:47 shared
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc    569682 Oct 12 06:47 input.tar.gz
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:47 boinc_lockfile
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc      2550 Oct 12 06:47 pandaJob.out
[2025-10-12 08:06:44] -rw------- 1 boinc boinc    975512 Oct 12 06:47 agis_schedconf.cvmfs.json
[2025-10-12 08:06:44] -rw------- 1 boinc boinc   1560580 Oct 12 06:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:06:44] drwx------ 5 boinc boinc      4096 Oct 12 06:47 pilot3
[2025-10-12 08:06:44] -rw------- 1 boinc boinc 192738182 Oct 12 08:04 HITS.46676269._060802.pool.root.1
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc       529 Oct 12 08:04 boinc_task_state.xml
[2025-10-12 08:06:44] -rw------- 1 boinc boinc      1026 Oct 12 08:04 memory_monitor_summary.json
[2025-10-12 08:06:44] -rw------- 1 boinc boinc    258643 Oct 12 08:05 log.46676269._060802.job.log.tgz.1
[2025-10-12 08:06:44] -rw------- 1 boinc boinc      7783 Oct 12 08:05 heartbeat.json
[2025-10-12 08:06:44] -rw------- 1 boinc boinc       822 Oct 12 08:05 pilotlog.txt
[2025-10-12 08:06:44] -rw------- 1 boinc boinc        95 Oct 12 08:05 pilot_heartbeat.json
[2025-10-12 08:06:44] -rw------- 1 boinc boinc    710177 Oct 12 08:05 log.46676269._060802.job.log.1
[2025-10-12 08:06:44] -rw------- 1 boinc boinc       357 Oct 12 08:05 output.list
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc       620 Oct 12 08:05 runtime_log
[2025-10-12 08:06:44] -rw------- 1 boinc boinc    993280 Oct 12 08:05 result.tar.gz
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc      8855 Oct 12 08:05 runtime_log.err
[2025-10-12 08:06:44] -rw------- 1 boinc boinc       657 Oct 12 08:05 6VRKDmVUrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ugNDmgfXl3m.diag
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc      9521 Oct 12 08:06 init_data.xml
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc        27 Oct 12 08:06 wrapper_checkpoint.txt
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc      8192 Oct 12 08:06 boinc_mmap_file
[2025-10-12 08:06:44] -rw-r--r-- 1 boinc boinc     22408 Oct 12 08:06 stderr.txt
[2025-10-12 08:06:44] HITS file was successfully produced:
[2025-10-12 08:06:44] -rw------- 1 boinc boinc 192738182 Oct 12 08:04 shared/HITS.pool.root.1
[2025-10-12 08:06:44]  *** Contents of shared directory: ***
[2025-10-12 08:06:44] total 403848
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc 219205603 Oct 12 06:47 ATLAS.root_0
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 08:06:44] -rw-r--r-- 2 boinc boinc    569682 Oct 12 06:47 input.tar.gz
[2025-10-12 08:06:44] -rw------- 1 boinc boinc 192738182 Oct 12 08:04 HITS.pool.root.1
[2025-10-12 08:06:44] -rw------- 1 boinc boinc    993280 Oct 12 08:05 result.tar.gz
08:06:46 (1054670): run_atlas exited; CPU time 17992.502265
08:06:46 (1054670): called boinc_finish(0)

</stderr_txt>
]]>

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