Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:26:09 (25927): wrapper (7.7.26015): starting
20:26:09 (25927): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 20:26:09] Arguments: --nthreads 8
[2025-10-11 20:26:09] Threads: 8
[2025-10-11 20:26:09] Checking for CVMFS
[2025-10-11 20:26:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:26:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:26:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:26:10] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/shared.storage.igwn.org: Permission denied
[2025-10-11 20:26:10] 
[2025-10-11 20:26:10] CVMFS is ok
[2025-10-11 20:26:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:26:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:26:10] Further information can be found at the LHC@home message board.
[2025-10-11 20:26:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:26:10] Checking for apptainer binary...
[2025-10-11 20:26:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:26:10] Running /usr/bin/apptainer --version
[2025-10-11 20:26:10] apptainer version 1.3.2-1.el7
[2025-10-11 20:26:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:26:11] c-9-30.aglt2.org
[2025-10-11 20:26:11] apptainer works
[2025-10-11 20:26:11] Set ATHENA_PROC_NUMBER=8
[2025-10-11 20:26:11] Set ATHENA_CORE_NUMBER=8
[2025-10-11 20:26:11] Starting ATLAS job with PandaID=6838850710
[2025-10-11 20:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:08:44]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:08:44] 2025-10-12 03:07:45,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:08:44] 2025-10-12 03:07:45,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:08:44] 2025-10-12 03:07:45,669 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:08:44] 2025-10-12 03:07:45,670 | INFO     | sum of square deviations: 1246386160.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,671 | INFO     | sum of deviations: -18106997463.999996
[2025-10-11 23:08:44] 2025-10-12 03:07:45,671 | INFO     | mean x: 1760233627.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,671 | INFO     | mean y: 2507830.0943396227
[2025-10-11 23:08:44] 2025-10-12 03:07:45,672 | INFO     | -- intersect: 25574474884.138424
[2025-10-11 23:08:44] 2025-10-12 03:07:45,672 | INFO     | intersect: 25574474884.138424
[2025-10-11 23:08:44] 2025-10-12 03:07:45,672 | INFO     | chi2: 2.4186657894370134
[2025-10-11 23:08:44] 2025-10-12 03:07:45,673 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 23:08:44] 2025-10-12 03:07:45,674 | INFO     | sum of deviations: -6563929613.500005
[2025-10-11 23:08:44] 2025-10-12 03:07:45,674 | INFO     | mean x: 1760233474.5
[2025-10-11 23:08:44] 2025-10-12 03:07:45,674 | INFO     | mean y: 2522914.201298701
[2025-10-11 23:08:44] 2025-10-12 03:07:45,674 | INFO     | -- intersect: 10205147749.102959
[2025-10-11 23:08:44] 2025-10-12 03:07:45,674 | INFO     | intersect: 10205147749.102959
[2025-10-11 23:08:44] 2025-10-12 03:07:45,675 | INFO     | chi2: 1.6042212596977892
[2025-10-11 23:08:44] 2025-10-12 03:07:45,675 | INFO     | current chi2=1.6042212596977892 (change=33.673297621198024 %)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,675 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,676 | INFO     | sum of deviations: -5998260356.999997
[2025-10-11 23:08:44] 2025-10-12 03:07:45,676 | INFO     | mean x: 1760233322.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,677 | INFO     | mean y: 2523722.4697986576
[2025-10-11 23:08:44] 2025-10-12 03:07:45,677 | INFO     | -- intersect: 10296374868.397251
[2025-10-11 23:08:44] 2025-10-12 03:07:45,677 | INFO     | intersect: 10296374868.397251
[2025-10-11 23:08:44] 2025-10-12 03:07:45,677 | INFO     | chi2: 1.6040292874095077
[2025-10-11 23:08:44] 2025-10-12 03:07:45,677 | INFO     | current chi2=1.6040292874095077 (change=0.01196669643423496 %)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,678 | INFO     | right removable region: 148
[2025-10-11 23:08:44] 2025-10-12 03:07:45,678 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 23:08:44] 2025-10-12 03:07:45,679 | INFO     | sum of deviations: -41923809525.99999
[2025-10-11 23:08:44] 2025-10-12 03:07:45,679 | INFO     | mean x: 1760233779.5
[2025-10-11 23:08:44] 2025-10-12 03:07:45,679 | INFO     | mean y: 2539240.025974026
[2025-10-11 23:08:44] 2025-10-12 03:07:45,680 | INFO     | -- intersect: 65166701494.032104
[2025-10-11 23:08:44] 2025-10-12 03:07:45,680 | INFO     | intersect: 65166701494.032104
[2025-10-11 23:08:44] 2025-10-12 03:07:45,680 | INFO     | chi2: 0.9515339674872045
[2025-10-11 23:08:44] 2025-10-12 03:07:45,680 | INFO     | current chi2=0.9515339674872045 (change=60.65872467197336 %)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,681 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,682 | INFO     | sum of deviations: -38024080929.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,682 | INFO     | mean x: 1760233932.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,682 | INFO     | mean y: 2533655.590604027
[2025-10-11 23:08:44] 2025-10-12 03:07:45,682 | INFO     | -- intersect: 65257181068.43154
[2025-10-11 23:08:44] 2025-10-12 03:07:45,682 | INFO     | intersect: 65257181068.43154
[2025-10-11 23:08:44] 2025-10-12 03:07:45,683 | INFO     | chi2: 0.9512859637915978
[2025-10-11 23:08:44] 2025-10-12 03:07:45,683 | INFO     | current chi2=0.9512859637915978 (change=0.02606356725883992 %)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,683 | INFO     | left removable region: 20
[2025-10-11 23:08:44] 2025-10-12 03:07:45,683 | INFO     | sum of square deviations: 650252192.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,684 | INFO     | sum of deviations: -16898740086.0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,684 | INFO     | mean x: 1760233901.5
[2025-10-11 23:08:44] 2025-10-12 03:07:45,685 | INFO     | mean y: 2537439.109375
[2025-10-11 23:08:44] 2025-10-12 03:07:45,685 | INFO     | -- intersect: 45747458498.92831
[2025-10-11 23:08:44] 2025-10-12 03:07:45,685 | INFO     | intersect: 45747458498.92831
[2025-10-11 23:08:44] 2025-10-12 03:07:45,685 | INFO     | chi2: 0.08343474040648828
[2025-10-11 23:08:44] 2025-10-12 03:07:45,685 | INFO     | -- intersect: 45747458498.92831
[2025-10-11 23:08:44] 2025-10-12 03:07:45,686 | INFO     | current memory leak: -25.99 B/s (using 128 data points, chi2=0.08)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,686 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,686 | INFO     | ..............................
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . Timing measurements:
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . get job = 0 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . initial setup = 2 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . payload setup = 5 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . stage-in = 0 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . payload execution = 9651 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,687 | INFO     | . stage-out = 1 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,688 | INFO     | . log creation = 0 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,688 | INFO     | ..............................
[2025-10-11 23:08:44] 2025-10-12 03:07:45,811 | INFO     | 
[2025-10-11 23:08:44] 2025-10-12 03:07:45,811 | INFO     | job summary report
[2025-10-11 23:08:44] 2025-10-12 03:07:45,811 | INFO     | --------------------------------------------------
[2025-10-11 23:08:44] 2025-10-12 03:07:45,811 | INFO     | PanDA job id: 6838850710
[2025-10-11 23:08:44] 2025-10-12 03:07:45,811 | INFO     | task id: 46676269
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | errors: (none)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | pilot state: finished 
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | transexitcode: 0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | exeerrorcode: 0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,812 | INFO     | exeerrordiag: 
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | exitcode: 0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | exitmsg: OK
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | cpuconsumptiontime: 72948 s
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | nevents: 400
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | neventsw: 0
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | pid: 39480
[2025-10-11 23:08:44] 2025-10-12 03:07:45,813 | INFO     | pgrp: 39480
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | corecount: 8
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | event service: False
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 9660: 2377738, 9661: 2386736, 9663: 2386920, 9668: 2387178}
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | --------------------------------------------------
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | 
[2025-10-11 23:08:44] 2025-10-12 03:07:45,814 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 23:08:44] 2025-10-12 03:07:45,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,839 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,839 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | job 6838850710 has completed (purged errors)
[2025-10-11 23:08:44] 2025-10-12 03:07:45,841 | INFO     | overall cleanup function is called
[2025-10-11 23:08:44] 2025-10-12 03:07:46,848 | INFO     | --- collectZombieJob: --- 10, [39480]
[2025-10-11 23:08:44] 2025-10-12 03:07:46,849 | INFO     | zombie collector waiting for pid 39480
[2025-10-11 23:08:44] 2025-10-12 03:07:46,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:08:44] 2025-10-12 03:07:46,849 | INFO     | collected zombie processes
[2025-10-11 23:08:44] 2025-10-12 03:07:46,849 | INFO     | will attempt to kill all subprocesses of pid=39480
[2025-10-11 23:08:44] 2025-10-12 03:07:47,152 | INFO     | process IDs to be killed: [39480] (in reverse order)
[2025-10-11 23:08:44] 2025-10-12 03:07:47,236 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:08:44] 2025-10-12 03:07:47,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:08:44] 2025-10-12 03:07:47,244 | INFO     | did not find any defunct processes belonging to 39480
[2025-10-11 23:08:44] 2025-10-12 03:07:47,248 | INFO     | did not find any defunct processes belonging to 39480
[2025-10-11 23:08:44] 2025-10-12 03:07:47,249 | INFO     | ready for new job
[2025-10-11 23:08:44] 2025-10-12 03:07:47,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:08:44] 2025-10-12 03:07:47,250 | INFO     | ***************************************
[2025-10-11 23:08:44] 2025-10-12 03:07:47,250 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:08:44] 2025-10-12 03:07:47,250 | INFO     | ***************************************
[2025-10-11 23:08:44] 2025-10-12 03:07:47,250 | INFO     | 
[2025-10-11 23:08:44] 2025-10-12 03:07:47,251 | INFO     | architecture information:
[2025-10-11 23:08:44] 2025-10-12 03:07:47,252 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:08:44] 2025-10-12 03:07:47,261 | INFO     | cat /etc/os-release:
[2025-10-11 23:08:44] NAME="CentOS Linux"
[2025-10-11 23:08:44] VERSION="7 (Core)"
[2025-10-11 23:08:44] ID="centos"
[2025-10-11 23:08:44] ID_LIKE="rhel fedora"
[2025-10-11 23:08:44] VERSION_ID="7"
[2025-10-11 23:08:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:08:44] ANSI_COLOR="0;31"
[2025-10-11 23:08:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:08:44] HOME_URL="https://www.centos.org/"
[2025-10-11 23:08:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:08:44] 
[2025-10-11 23:08:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:08:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:08:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:08:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:08:44] 
[2025-10-11 23:08:44] 2025-10-12 03:07:47,262 | INFO     | ***************************************
[2025-10-11 23:08:44] 2025-10-12 03:07:47,765 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 23:08:44] 2025-10-12 03:07:47,780 | INFO     | sufficient remaining disk space (104999157760 B)
[2025-10-11 23:08:44] 2025-10-12 03:07:47,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:08:44] 2025-10-12 03:07:47,780 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:08:44] 2025-10-12 03:07:47,781 | INFO     | update_server=False
[2025-10-11 23:08:44] 2025-10-12 03:07:47,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:08:44] 2025-10-12 03:07:47,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:08:44] 2025-10-12 03:07:47,873 | INFO     | all payload control threads have been joined
[2025-10-11 23:08:44] 2025-10-12 03:07:48,055 | INFO     | all data control threads have been joined
[2025-10-11 23:08:44] 2025-10-12 03:07:48,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:08:44] 2025-10-12 03:07:48,276 | INFO     | aborting loop
[2025-10-11 23:08:44] 2025-10-12 03:07:48,782 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:48,785 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:48,852 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:48,879 | INFO     | [payload] control thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:48,887 | INFO     | all job control threads have been joined
[2025-10-11 23:08:44] 2025-10-12 03:07:48,927 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:08:44] 2025-10-12 03:07:49,061 | INFO     | [data] control thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,281 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,521 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,569 | INFO     | [job] validate thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,729 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,893 | INFO     | [job] control thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:49,977 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:51,015 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:51,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:08:44] 2025-10-12 03:07:55,165 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:07:58,764 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:08:44] 2025-10-12 03:07:59,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:08:44] 2025-10-12 03:08:17,386 | INFO     | PID=29957 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:08:44] 2025-10-12 03:08:17,386 | INFO     | .. there are 4 such processes running
[2025-10-11 23:08:44] 2025-10-12 03:08:17,387 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:08:44] 2025-10-12 03:08:17,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:08:44] 2025-10-12 03:08:17,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:08:44] 2025-10-12 03:08:37,626 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:08:44] 2025-10-12 03:08:39,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325363418944)>', '<ExcThread(monitor, started 140324626228992)>']
[2025-10-11 23:08:44] 2025-10-12 03:08:39,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:08:44] 2025-10-12 03:08:39,516 | INFO     | [monitor] control thread has ended
[2025-10-11 23:08:44] 2025-10-12 03:08:44,211 | INFO     | all workflow threads have been joined
[2025-10-11 23:08:44] 2025-10-12 03:08:44,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:08:44] 2025-10-12 03:08:44,212 | INFO     | traces error code: 0
[2025-10-11 23:08:44] 2025-10-12 03:08:44,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:08:44] 2025-10-12 03:08:44,338 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:08:44] 2025-10-12 03:08:44,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:08:44] 2025-10-12 03:08:44,346 [wrapper] pilotpid: 29957
[2025-10-11 23:08:44] 2025-10-12 03:08:44,348 [wrapper] Pilot exit status: 0
[2025-10-11 23:08:44] 2025-10-12 03:08:44,358 [wrapper] pandaids: 6838850710
[2025-10-11 23:08:44] 2025-10-12 03:08:44,407 [wrapper] cleanup supervisor_pilot 37119 29958
[2025-10-11 23:08:44] 2025-10-12 03:08:44,409 [wrapper] Test setup, not cleaning
[2025-10-11 23:08:44] 2025-10-12 03:08:44,411 [wrapper] apfmon messages muted
[2025-10-11 23:08:44] 2025-10-12 03:08:44,413 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:08:44] 2025-10-12 03:08:44,416 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:08:44]  *** Error codes and diagnostics ***
[2025-10-11 23:08:44]     "exeErrorCode": 0,
[2025-10-11 23:08:44]     "exeErrorDiag": "",
[2025-10-11 23:08:44]     "pilotErrorCode": 0,
[2025-10-11 23:08:44]     "pilotErrorDiag": "",
[2025-10-11 23:08:44]  *** Listing of results directory ***
[2025-10-11 23:08:44] total 406648
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 15:02 pilot3.tar.gz
[2025-10-11 23:08:44] -rwx------ 1 boincer umatlas     36292 Oct 11 15:22 runpilot2-wrapper.sh
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 15:22 queuedata.json
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas       100 Oct 11 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:08:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 20:26 run_atlas
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas       105 Oct 11 20:26 job.xml
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas 218087732 Oct 11 20:26 EVNT.46676267._002547.pool.root.1
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:26 start_atlas.sh
[2025-10-11 23:08:44] drwxrwx--x 2 boincer umatlas      4096 Oct 11 20:26 shared
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 20:26 input.tar.gz
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas         0 Oct 11 20:26 boinc_lockfile
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 20:26 pandaJob.out
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas    975496 Oct 11 20:26 agis_schedconf.cvmfs.json
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas   1560580 Oct 11 20:26 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:08:44] drwx------ 5 boincer umatlas      4096 Oct 11 20:26 pilot3
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas      6034 Oct 11 23:03 init_data.xml
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas 190930947 Oct 11 23:07 HITS.46676269._063386.pool.root.1
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:07 boinc_task_state.xml
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas      1045 Oct 11 23:07 memory_monitor_summary.json
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas    392411 Oct 11 23:07 log.46676269._063386.job.log.tgz.1
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas      7834 Oct 11 23:07 heartbeat.json
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas        95 Oct 11 23:08 pilot_heartbeat.json
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:08 boinc_mmap_file
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:08 wrapper_checkpoint.txt
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas      4894 Oct 11 23:08 pilotlog.txt
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas   1351669 Oct 11 23:08 log.46676269._063386.job.log.1
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas       357 Oct 11 23:08 output.list
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:08 runtime_log
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas   1761280 Oct 11 23:08 result.tar.gz
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas      8693 Oct 11 23:08 runtime_log.err
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas       657 Oct 11 23:08 r5gKDm4LuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMRSMDm550jDo.diag
[2025-10-11 23:08:44] -rw-r--r-- 1 boincer umatlas     20595 Oct 11 23:08 stderr.txt
[2025-10-11 23:08:44] HITS file was successfully produced:
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas 190930947 Oct 11 23:07 shared/HITS.pool.root.1
[2025-10-11 23:08:44]  *** Contents of shared directory: ***
[2025-10-11 23:08:44] total 401740
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas 218087732 Oct 11 20:26 ATLAS.root_0
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 20:26 start_atlas.sh
[2025-10-11 23:08:44] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 20:26 input.tar.gz
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas 190930947 Oct 11 23:07 HITS.pool.root.1
[2025-10-11 23:08:44] -rw------- 1 boincer umatlas   1761280 Oct 11 23:08 result.tar.gz
23:08:46 (25927): run_atlas exited; CPU time 73246.807596
23:08:46 (25927): called boinc_finish(0)

</stderr_txt>
]]>

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