Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:29 (3414689): wrapper (7.7.26015): starting
20:17:29 (3414689): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 20:17:29] Arguments: --nthreads 8
[2025-10-11 20:17:29] Threads: 8
[2025-10-11 20:17:29] Checking for CVMFS
[2025-10-11 20:17:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:17:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:17:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:17:30] 2.13.1.0 4140 3506 72860 151601 4 1 34336803 39288833 3664 16776704 0 12070661 99.997 119244 33741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 20:17:30] CVMFS is ok
[2025-10-11 20:17:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:17:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:17:30] Further information can be found at the LHC@home message board.
[2025-10-11 20:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:17:30] Checking for apptainer binary...
[2025-10-11 20:17:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:17:30] Running /usr/bin/apptainer --version
[2025-10-11 20:17:30] apptainer version 1.4.3-1.el9
[2025-10-11 20:17:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:17:30] c-210-16.aglt2.org
[2025-10-11 20:17:30] apptainer works
[2025-10-11 20:17:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 20:17:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 20:17:30] Starting ATLAS job with PandaID=6838773227
[2025-10-11 20:17:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:02:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:02:56] 2025-10-12 02:02:15,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:02:56] 2025-10-12 02:02:15,600 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:02:56] 2025-10-12 02:02:15,600 | INFO     | sum of square deviations: 338804492.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,601 | INFO     | sum of deviations: -14920495202.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,601 | INFO     | mean x: 1760231396.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,601 | INFO     | mean y: 2588570.8155339807
[2025-10-11 22:02:56] 2025-10-12 02:02:15,601 | INFO     | -- intersect: 77520817279.62427
[2025-10-11 22:02:56] 2025-10-12 02:02:15,601 | INFO     | intersect: 77520817279.62427
[2025-10-11 22:02:56] 2025-10-12 02:02:15,602 | INFO     | chi2: 2.233914569796039
[2025-10-11 22:02:56] 2025-10-12 02:02:15,602 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | sum of deviations: -6670564994.499999
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | mean x: 1760231243.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | mean y: 2614476.5408163266
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | -- intersect: 40239181234.386894
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | intersect: 40239181234.386894
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | chi2: 1.4671250098212913
[2025-10-11 22:02:56] 2025-10-12 02:02:15,603 | INFO     | current chi2=1.4671250098212913 (change=34.3249276557947 %)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,604 | INFO     | sum of square deviations: 249388862.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,604 | INFO     | sum of deviations: -5401926919.000001
[2025-10-11 22:02:56] 2025-10-12 02:02:15,604 | INFO     | mean x: 1760231091.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | mean y: 2619041.505376344
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | -- intersect: 38130383200.16953
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | intersect: 38130383200.16953
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | chi2: 1.4690826329505824
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | current chi2=1.4690826329505824 (change=-0.13343260568705712 %)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | right removable region: 92
[2025-10-11 22:02:56] 2025-10-12 02:02:15,605 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,606 | INFO     | sum of deviations: -28900912328.000004
[2025-10-11 22:02:56] 2025-10-12 02:02:15,606 | INFO     | mean x: 1760231548.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,606 | INFO     | mean y: 2632805.1224489794
[2025-10-11 22:02:56] 2025-10-12 02:02:15,606 | INFO     | -- intersect: 174331747460.51593
[2025-10-11 22:02:56] 2025-10-12 02:02:15,607 | INFO     | intersect: 174331747460.51593
[2025-10-11 22:02:56] 2025-10-12 02:02:15,607 | INFO     | chi2: 0.884937064600253
[2025-10-11 22:02:56] 2025-10-12 02:02:15,607 | INFO     | current chi2=0.884937064600253 (change=60.386262009963545 %)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,607 | INFO     | sum of square deviations: 249388862.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | sum of deviations: -26416393430.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | mean x: 1760231701.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | mean y: 2623715.1505376343
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | -- intersect: 186454307117.0104
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | intersect: 186454307117.0104
[2025-10-11 22:02:56] 2025-10-12 02:02:15,608 | INFO     | chi2: 0.8749305347833596
[2025-10-11 22:02:56] 2025-10-12 02:02:15,609 | INFO     | current chi2=0.8749305347833596 (change=1.1307617476067198 %)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,609 | INFO     | left removable region: 20
[2025-10-11 22:02:56] 2025-10-12 02:02:15,609 | INFO     | sum of square deviations: 115715658.0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,609 | INFO     | sum of deviations: -10081638329.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,609 | INFO     | mean x: 1760231670.5
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | mean y: 2628389.513888889
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | -- intersect: 153361468367.00952
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | intersect: 153361468367.00952
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | chi2: 0.04082836305296535
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | -- intersect: 153361468367.00952
[2025-10-11 22:02:56] 2025-10-12 02:02:15,610 | INFO     | current memory leak: -87.12 B/s (using 72 data points, chi2=0.04)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | could have reported an average CPU frequency of 2620 MHz (7 samples)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | ..............................
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | . Timing measurements:
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | . get job = 0 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | . initial setup = 2 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | . payload setup = 5 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,611 | INFO     | . stage-in = 0 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,612 | INFO     | . payload execution = 6242 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,612 | INFO     | . stage-out = 0 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,612 | INFO     | . log creation = 0 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,612 | INFO     | ..............................
[2025-10-11 22:02:56] 2025-10-12 02:02:15,718 | INFO     | 
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | job summary report
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | --------------------------------------------------
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | PanDA job id: 6838773227
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | task id: 46676269
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | errors: (none)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | pilot state: finished 
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | transexitcode: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,719 | INFO     | exeerrorcode: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | exeerrordiag: 
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | exitcode: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | exitmsg: OK
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | cpuconsumptiontime: 44994 s
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | nevents: 400
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | neventsw: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | pid: 3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | pgrp: 3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:15,720 | INFO     | corecount: 8
[2025-10-11 22:02:56] 2025-10-12 02:02:15,721 | INFO     | event service: False
[2025-10-11 22:02:56] 2025-10-12 02:02:15,721 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6251: 2376204, 6252: 2376203, 6254: 2385257, 6256: 2385441, 6260: 2385635}
[2025-10-11 22:02:56] 2025-10-12 02:02:15,721 | INFO     | --------------------------------------------------
[2025-10-11 22:02:56] 2025-10-12 02:02:15,721 | INFO     | 
[2025-10-11 22:02:56] 2025-10-12 02:02:15,721 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 22:02:56] 2025-10-12 02:02:15,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:02:56] 2025-10-12 02:02:15,742 | INFO     | job 6838773227 has completed (purged errors)
[2025-10-11 22:02:56] 2025-10-12 02:02:15,742 | INFO     | overall cleanup function is called
[2025-10-11 22:02:56] 2025-10-12 02:02:16,750 | INFO     | --- collectZombieJob: --- 10, [3424668]
[2025-10-11 22:02:56] 2025-10-12 02:02:16,750 | INFO     | zombie collector waiting for pid 3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:16,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:02:56] 2025-10-12 02:02:16,751 | INFO     | collected zombie processes
[2025-10-11 22:02:56] 2025-10-12 02:02:16,751 | INFO     | will attempt to kill all subprocesses of pid=3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:16,975 | INFO     | process IDs to be killed: [3424668] (in reverse order)
[2025-10-11 22:02:56] 2025-10-12 02:02:17,037 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:02:56] 2025-10-12 02:02:17,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:02:56] 2025-10-12 02:02:17,043 | INFO     | did not find any defunct processes belonging to 3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:17,049 | INFO     | did not find any defunct processes belonging to 3424668
[2025-10-11 22:02:56] 2025-10-12 02:02:17,049 | INFO     | ready for new job
[2025-10-11 22:02:56] 2025-10-12 02:02:17,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:02:56] 2025-10-12 02:02:17,051 | INFO     | ***************************************
[2025-10-11 22:02:56] 2025-10-12 02:02:17,051 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:02:56] 2025-10-12 02:02:17,052 | INFO     | ***************************************
[2025-10-11 22:02:56] 2025-10-12 02:02:17,052 | INFO     | 
[2025-10-11 22:02:56] 2025-10-12 02:02:17,054 | INFO     | architecture information:
[2025-10-11 22:02:56] 2025-10-12 02:02:17,054 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:02:56] 2025-10-12 02:02:17,068 | INFO     | cat /etc/os-release:
[2025-10-11 22:02:56] NAME="CentOS Linux"
[2025-10-11 22:02:56] VERSION="7 (Core)"
[2025-10-11 22:02:56] ID="centos"
[2025-10-11 22:02:56] ID_LIKE="rhel fedora"
[2025-10-11 22:02:56] VERSION_ID="7"
[2025-10-11 22:02:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:02:56] ANSI_COLOR="0;31"
[2025-10-11 22:02:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:02:56] HOME_URL="https://www.centos.org/"
[2025-10-11 22:02:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:02:56] 
[2025-10-11 22:02:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:02:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:02:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:02:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:02:56] 
[2025-10-11 22:02:56] 2025-10-12 02:02:17,068 | INFO     | ***************************************
[2025-10-11 22:02:56] 2025-10-12 02:02:17,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 22:02:56] 2025-10-12 02:02:17,586 | INFO     | sufficient remaining disk space (51619299328 B)
[2025-10-11 22:02:56] 2025-10-12 02:02:17,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:02:56] 2025-10-12 02:02:17,587 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:02:56] 2025-10-12 02:02:17,587 | INFO     | update_server=False
[2025-10-11 22:02:56] 2025-10-12 02:02:17,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:02:56] 2025-10-12 02:02:17,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:02:56] 2025-10-12 02:02:17,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:02:56] 2025-10-12 02:02:17,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:02:56] 2025-10-12 02:02:17,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:02:56] 2025-10-12 02:02:17,588 | INFO     | aborting loop
[2025-10-11 22:02:56] 2025-10-12 02:02:18,402 | INFO     | all payload control threads have been joined
[2025-10-11 22:02:56] 2025-10-12 02:02:18,474 | INFO     | all data control threads have been joined
[2025-10-11 22:02:56] 2025-10-12 02:02:18,588 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:18,593 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:18,594 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:18,712 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:18,769 | INFO     | all job control threads have been joined
[2025-10-11 22:02:56] 2025-10-12 02:02:19,057 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,088 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,155 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,407 | INFO     | [payload] control thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,480 | INFO     | [data] control thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,594 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,744 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,774 | INFO     | [job] control thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,884 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:19,935 | INFO     | [job] validate thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:21,593 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:28,415 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:02:56] 2025-10-12 02:02:29,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:02:56] 2025-10-12 02:02:37,375 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-11 22:02:56] 2025-10-12 02:02:47,349 | INFO     | PID=3418348 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:02:56] 2025-10-12 02:02:47,349 | INFO     | .. there are 5 such processes running
[2025-10-11 22:02:56] 2025-10-12 02:02:47,350 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:02:56] 2025-10-12 02:02:47,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:02:56] 2025-10-12 02:02:47,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:02:56] 2025-10-12 02:02:50,530 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:02:56] 2025-10-12 02:02:50,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140224420210496)>', '<ExcThread(monitor, started 140224063579904)>']
[2025-10-11 22:02:56] 2025-10-12 02:02:51,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:02:56] 2025-10-12 02:02:51,371 | INFO     | [monitor] control thread has ended
[2025-10-11 22:02:56] 2025-10-12 02:02:55,901 | INFO     | all workflow threads have been joined
[2025-10-11 22:02:56] 2025-10-12 02:02:55,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:02:56] 2025-10-12 02:02:55,902 | INFO     | traces error code: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:55,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:02:56] 2025-10-12 02:02:56,024 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:02:56] 2025-10-12 02:02:56,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:02:56] 2025-10-12 02:02:56,030 [wrapper] pilotpid: 3418348
[2025-10-11 22:02:56] 2025-10-12 02:02:56,032 [wrapper] Pilot exit status: 0
[2025-10-11 22:02:56] 2025-10-12 02:02:56,041 [wrapper] pandaids: 6838773227
[2025-10-11 22:02:56] 2025-10-12 02:02:56,083 [wrapper] cleanup supervisor_pilot 3649232 3418349
[2025-10-11 22:02:56] 2025-10-12 02:02:56,085 [wrapper] Test setup, not cleaning
[2025-10-11 22:02:56] 2025-10-12 02:02:56,088 [wrapper] apfmon messages muted
[2025-10-11 22:02:56] 2025-10-12 02:02:56,090 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:02:56] 2025-10-12 02:02:56,093 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:02:56]  *** Error codes and diagnostics ***
[2025-10-11 22:02:56]     "exeErrorCode": 0,
[2025-10-11 22:02:56]     "exeErrorDiag": "",
[2025-10-11 22:02:56]     "pilotErrorCode": 0,
[2025-10-11 22:02:56]     "pilotErrorDiag": "",
[2025-10-11 22:02:56]  *** Listing of results directory ***
[2025-10-11 22:02:56] total 410644
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:25 queuedata.json
[2025-10-11 22:02:56] -rwx------. 1 boincer umatlas     36292 Oct 11 14:26 runpilot2-wrapper.sh
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas       100 Oct 11 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:02:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 20:17 run_atlas
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas       105 Oct 11 20:17 job.xml
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas 219672283 Oct 11 20:17 EVNT.46676267._002517.pool.root.1
[2025-10-11 22:02:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 20:17 shared
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 20:17 input.tar.gz
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:17 start_atlas.sh
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas         0 Oct 11 20:17 boinc_lockfile
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 20:17 pandaJob.out
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas    975496 Oct 11 20:17 agis_schedconf.cvmfs.json
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas   1560580 Oct 11 20:17 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:02:56] drwx------. 5 boincer umatlas      4096 Oct 11 20:17 pilot3
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 22:00 init_data.xml
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas       529 Oct 11 22:01 boinc_task_state.xml
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas 194401148 Oct 11 22:01 HITS.46676269._062657.pool.root.1
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas      1035 Oct 11 22:02 memory_monitor_summary.json
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas    345404 Oct 11 22:02 log.46676269._062657.job.log.tgz.1
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas      7818 Oct 11 22:02 heartbeat.json
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas        95 Oct 11 22:02 pilot_heartbeat.json
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:02 boinc_mmap_file
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas        27 Oct 11 22:02 wrapper_checkpoint.txt
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas      4895 Oct 11 22:02 pilotlog.txt
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas    916768 Oct 11 22:02 log.46676269._062657.job.log.1
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas       357 Oct 11 22:02 output.list
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:02 runtime_log
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas   1280000 Oct 11 22:02 result.tar.gz
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 22:02 runtime_log.err
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas       652 Oct 11 22:02 LrgNDmETtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCFhNDmBa2xMn.diag
[2025-10-11 22:02:56] -rw-r--r--. 1 boincer umatlas     20879 Oct 11 22:02 stderr.txt
[2025-10-11 22:02:56] HITS file was successfully produced:
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas 194401148 Oct 11 22:01 shared/HITS.pool.root.1
[2025-10-11 22:02:56]  *** Contents of shared directory: ***
[2025-10-11 22:02:56] total 406204
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas 219672283 Oct 11 20:17 ATLAS.root_0
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 20:17 input.tar.gz
[2025-10-11 22:02:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:17 start_atlas.sh
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas 194401148 Oct 11 22:01 HITS.pool.root.1
[2025-10-11 22:02:56] -rw-------. 1 boincer umatlas   1280000 Oct 11 22:02 result.tar.gz
22:02:57 (3414689): run_atlas exited; CPU time 45111.787758
22:02:57 (3414689): called boinc_finish(0)

</stderr_txt>
]]>

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