Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:20:11 (2181221): wrapper (7.7.26015): starting
11:20:11 (2181221): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 11:20:11] Arguments: --nthreads 2
[2025-10-12 11:20:11] Threads: 2
[2025-10-12 11:20:11] Checking for CVMFS
[2025-10-12 11:20:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:20:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:20:11] 2.9.2.0 1267943 3966 57616 151615 3 57 31479771 36864001 0 130560 0 2413075 99.988 137075 880 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 11:20:11] CVMFS is ok
[2025-10-12 11:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:20:11] Further information can be found at the LHC@home message board.
[2025-10-12 11:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:20:11] Checking for apptainer binary...
[2025-10-12 11:20:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:20:11] Running /usr/bin/apptainer --version
[2025-10-12 11:20:11] apptainer version 1.4.1-1.1
[2025-10-12 11:20:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:20:12] thA334a
[2025-10-12 11:20:12] apptainer works
[2025-10-12 11:20:12] Set ATHENA_PROC_NUMBER=2
[2025-10-12 11:20:12] Set ATHENA_CORE_NUMBER=2
[2025-10-12 11:20:12] Starting ATLAS job with PandaID=6838850566
[2025-10-12 11:20:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:28:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:28:38] 2025-10-12 11:27:55,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:28:38] 2025-10-12 11:27:55,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:38] 2025-10-12 11:27:55,467 | INFO     | aborting loop
[2025-10-12 13:28:38] 2025-10-12 11:27:55,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:38] 2025-10-12 11:27:55,835 | INFO     | all payload control threads have been joined
[2025-10-12 13:28:38] 2025-10-12 11:27:56,378 | INFO     | all data control threads have been joined
[2025-10-12 13:28:38] 2025-10-12 11:27:56,470 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:56,471 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:56,472 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:56,622 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:56,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:28:38] 2025-10-12 11:27:56,841 | INFO     | [payload] control thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,140 | INFO     | all job control threads have been joined
[2025-10-12 13:28:38] 2025-10-12 11:27:57,189 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,278 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,384 | INFO     | [data] control thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,436 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,473 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,750 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,750 | INFO     | [job] validate thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:57,810 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:27:58,146 | INFO     | [job] control thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:28:00,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:28:06,449 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:28:38] 2025-10-12 11:28:07,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:28:38] 2025-10-12 11:28:26,174 | INFO     | PID=2184930 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:28:38] 2025-10-12 11:28:26,174 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:28:38] 2025-10-12 11:28:26,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:28:38] 2025-10-12 11:28:26,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:28:38] 2025-10-12 11:28:33,047 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:28:38] 2025-10-12 11:28:33,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702369003328)>', '<ExcThread(monitor, started 140701509609216)>']
[2025-10-12 13:28:38] 2025-10-12 11:28:33,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:28:38] 2025-10-12 11:28:33,213 | INFO     | [monitor] control thread has ended
[2025-10-12 13:28:38] 2025-10-12 11:28:38,230 | INFO     | all workflow threads have been joined
[2025-10-12 13:28:38] 2025-10-12 11:28:38,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:28:38] 2025-10-12 11:28:38,230 | INFO     | traces error code: 0
[2025-10-12 13:28:38] 2025-10-12 11:28:38,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:28:38] 2025-10-12 11:28:38,270 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:28:38] 2025-10-12 11:28:38,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:28:38] 2025-10-12 11:28:38,275 [wrapper] pilotpid: 2184930
[2025-10-12 13:28:38] 2025-10-12 11:28:38,277 [wrapper] Pilot exit status: 0
[2025-10-12 13:28:38] 2025-10-12 11:28:38,283 [wrapper] pandaids: 6838850566
[2025-10-12 13:28:38] 2025-10-12 11:28:38,297 [wrapper] cleanup supervisor_pilot 2206525 2184931
[2025-10-12 13:28:38] 2025-10-12 11:28:38,299 [wrapper] Test setup, not cleaning
[2025-10-12 13:28:38] 2025-10-12 11:28:38,301 [wrapper] apfmon messages muted
[2025-10-12 13:28:38] 2025-10-12 11:28:38,304 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:28:38] 2025-10-12 11:28:38,306 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:28:38]  *** Error codes and diagnostics ***
[2025-10-12 13:28:38]     "exeErrorCode": 0,
[2025-10-12 13:28:38]     "exeErrorDiag": "",
[2025-10-12 13:28:38]     "pilotErrorCode": 0,
[2025-10-12 13:28:38]     "pilotErrorDiag": "",
[2025-10-12 13:28:38]  *** Listing of results directory ***
[2025-10-12 13:28:38] total 412796
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 21:02 pilot3.tar.gz
[2025-10-12 13:28:38] -rwx------ 1 boinc boinc     36292 Oct 11 21:03 runpilot2-wrapper.sh
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 21:03 queuedata.json
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:28:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:20 run_atlas
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:20 job.xml
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc 221667348 Oct 12 11:20 EVNT.46676267._002541.pool.root.1
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc    569675 Oct 12 11:20 input.tar.gz
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:20 start_atlas.sh
[2025-10-12 13:28:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:20 shared
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:20 boinc_setup_complete
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      6207 Oct 12 11:20 init_data.xml
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:20 boinc_lockfile
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:20 pandaJob.out
[2025-10-12 13:28:38] -rw------- 1 boinc boinc    975536 Oct 12 11:20 agis_schedconf.cvmfs.json
[2025-10-12 13:28:38] -rw------- 1 boinc boinc   1560580 Oct 12 11:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:28:38] drwx------ 5 boinc boinc      4096 Oct 12 11:20 pilot3
[2025-10-12 13:28:38] -rw------- 1 boinc boinc 194395194 Oct 12 13:27 HITS.46676269._063242.pool.root.1
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:27 boinc_task_state.xml
[2025-10-12 13:28:38] -rw------- 1 boinc boinc      1015 Oct 12 13:27 memory_monitor_summary.json
[2025-10-12 13:28:38] -rw------- 1 boinc boinc    275702 Oct 12 13:27 log.46676269._063242.job.log.tgz.1
[2025-10-12 13:28:38] -rw------- 1 boinc boinc      7754 Oct 12 13:27 heartbeat.json
[2025-10-12 13:28:38] -rw------- 1 boinc boinc        95 Oct 12 13:28 pilot_heartbeat.json
[2025-10-12 13:28:38] -rw------- 1 boinc boinc      4824 Oct 12 13:28 pilotlog.txt
[2025-10-12 13:28:38] -rw------- 1 boinc boinc   1101126 Oct 12 13:28 log.46676269._063242.job.log.1
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:28 wrapper_checkpoint.txt
[2025-10-12 13:28:38] -rw------- 1 boinc boinc       357 Oct 12 13:28 output.list
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:28 runtime_log
[2025-10-12 13:28:38] -rw------- 1 boinc boinc   1392640 Oct 12 13:28 result.tar.gz
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      8782 Oct 12 13:28 runtime_log.err
[2025-10-12 13:28:38] -rw------- 1 boinc boinc       660 Oct 12 13:28 cA1NDm72tR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0PSMDmzuoY6m.diag
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:28 boinc_mmap_file
[2025-10-12 13:28:38] -rw-r--r-- 1 boinc boinc      7289 Oct 12 13:28 stderr.txt
[2025-10-12 13:28:38] HITS file was successfully produced:
[2025-10-12 13:28:38] -rw------- 1 boinc boinc 194395194 Oct 12 13:27 shared/HITS.pool.root.1
[2025-10-12 13:28:38]  *** Contents of shared directory: ***
[2025-10-12 13:28:38] total 408260
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc 221667348 Oct 12 11:20 ATLAS.root_0
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc    569675 Oct 12 11:20 input.tar.gz
[2025-10-12 13:28:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:20 start_atlas.sh
[2025-10-12 13:28:38] -rw------- 1 boinc boinc 194395194 Oct 12 13:27 HITS.pool.root.1
[2025-10-12 13:28:38] -rw------- 1 boinc boinc   1392640 Oct 12 13:28 result.tar.gz
13:29:00 (2181221): run_atlas exited; CPU time 14866.027758
13:29:00 (2181221): called boinc_finish(0)

</stderr_txt>
]]>

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