Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:11:25 (3184728): wrapper (7.7.26015): starting
05:11:25 (3184728): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:11:25] Arguments: --nthreads 4
[2025-10-13 05:11:25] Threads: 4
[2025-10-13 05:11:25] Checking for CVMFS
[2025-10-13 05:11:25] No cvmfs_config command found, will try listing directly
[2025-10-13 05:11:25] CVMFS is ok
[2025-10-13 05:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:11:25] Further information can be found at the LHC@home message board.
[2025-10-13 05:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:11:25] Checking for apptainer binary...
[2025-10-13 05:11:25] which: no apptainer in ((null))
[2025-10-13 05:11:25] apptainer is not installed, using version from CVMFS
[2025-10-13 05:11:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:11:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 05:11:25] apptainer works
[2025-10-13 05:11:25] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:11:25] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:11:25] Starting ATLAS job with PandaID=6838849802
[2025-10-13 05:11:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:47:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:47:20] 2025-10-13 05:38:21,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:47:20] 2025-10-13 05:38:21,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:47:20] 2025-10-13 05:38:21,984 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:47:20] 2025-10-13 05:38:21,984 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,985 | INFO     | sum of deviations: 19568740860.499996
[2025-10-13 07:47:20] 2025-10-13 05:38:21,985 | INFO     | mean x: 1760329494.5
[2025-10-13 07:47:20] 2025-10-13 05:38:21,985 | INFO     | mean y: 2302476.465277778
[2025-10-13 07:47:20] 2025-10-13 05:38:21,985 | INFO     | -- intersect: -37203604169.86639
[2025-10-13 07:47:20] 2025-10-13 05:38:21,985 | INFO     | intersect: -37203604169.86639
[2025-10-13 07:47:20] 2025-10-13 05:38:21,986 | INFO     | chi2: 1.2608302400696507
[2025-10-13 07:47:20] 2025-10-13 05:38:21,986 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | sum of deviations: 18756838150.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | mean x: 1760329342.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | mean y: 2301146.7553956835
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | -- intersect: -39648613761.88182
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | intersect: -39648613761.88182
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | chi2: 1.2618360678019445
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | current chi2=1.2618360678019445 (change=-0.07977503238169291 %)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | right removable region: 138
[2025-10-13 07:47:20] 2025-10-13 05:38:21,987 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,988 | INFO     | sum of deviations: 2561393050.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,988 | INFO     | mean x: 1760329647.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,988 | INFO     | mean y: 2329791.7769784173
[2025-10-13 07:47:20] 2025-10-13 05:38:21,988 | INFO     | -- intersect: -5412313905.51332
[2025-10-13 07:47:20] 2025-10-13 05:38:21,988 | INFO     | intersect: -5412313905.51332
[2025-10-13 07:47:20] 2025-10-13 05:38:21,989 | INFO     | chi2: 0.0010480599086293034
[2025-10-13 07:47:20] 2025-10-13 05:38:21,989 | INFO     | current chi2=0.0010480599086293034 (change=99.9168754146814 %)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,989 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | sum of deviations: 1847606155.5000002
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | mean x: 1760329799.5
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | mean y: 2331041.5447761193
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | -- intersect: -4357150163.183511
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | intersect: -4357150163.183511
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | chi2: 0.00047959582936904586
[2025-10-13 07:47:20] 2025-10-13 05:38:21,990 | INFO     | current chi2=0.00047959582936904586 (change=54.23965505976835 %)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | sum of deviations: 1446834539.0000002
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | mean x: 1760329952.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | mean y: 2331800.96124031
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | -- intersect: -3824078086.350086
[2025-10-13 07:47:20] 2025-10-13 05:38:21,991 | INFO     | intersect: -3824078086.350086
[2025-10-13 07:47:20] 2025-10-13 05:38:21,992 | INFO     | chi2: 0.000374215669223408
[2025-10-13 07:47:20] 2025-10-13 05:38:21,992 | INFO     | current chi2=0.000374215669223408 (change=21.97270153167836 %)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,992 | INFO     | left removable region: 30
[2025-10-13 07:47:20] 2025-10-13 05:38:21,992 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,992 | INFO     | sum of deviations: 696419371.0
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | mean x: 1760330226.5
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | mean y: 2332843.296296296
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | -- intersect: -3136386860.572389
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | intersect: -3136386860.572389
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | chi2: 0.00033104691640661383
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | -- intersect: -3136386860.572389
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | current memory leak: 1.78 B/s (using 108 data points, chi2=0.00)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,993 | INFO     | could have reported an average CPU frequency of 2717 MHz (8 samples)
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | ..............................
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . Timing measurements:
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . get job = 0 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . initial setup = 1 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . payload setup = 8 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . stage-in = 0 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . payload execution = 8763 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . stage-out = 1 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | . log creation = 0 s
[2025-10-13 07:47:20] 2025-10-13 05:38:21,994 | INFO     | ..............................
[2025-10-13 07:47:20] 2025-10-13 05:38:22,266 | INFO     | 
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | job summary report
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | --------------------------------------------------
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | PanDA job id: 6838849802
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | task id: 46676269
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | errors: (none)
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | pilot state: finished 
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | transexitcode: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | exeerrorcode: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | exeerrordiag: 
[2025-10-13 07:47:20] 2025-10-13 05:38:22,267 | INFO     | exitcode: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | exitmsg: OK
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | cpuconsumptiontime: 33624 s
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | nevents: 400
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | neventsw: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | pid: 3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | pgrp: 3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | corecount: 4
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | event service: False
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | sizes: {0: 2348698, 1: 2348897, 7: 2349159, 12: 2349187, 8775: 2377779, 8777: 2386985, 8784: 2387123}
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | --------------------------------------------------
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | 
[2025-10-13 07:47:20] 2025-10-13 05:38:22,268 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-13 07:47:20] 2025-10-13 05:38:22,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,300 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:47:20] 2025-10-13 05:38:22,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:47:20] 2025-10-13 05:38:22,306 | INFO     | job 6838849802 has completed (purged errors)
[2025-10-13 07:47:20] 2025-10-13 05:38:22,306 | INFO     | overall cleanup function is called
[2025-10-13 07:47:20] 2025-10-13 05:38:23,315 | INFO     | --- collectZombieJob: --- 10, [3196623]
[2025-10-13 07:47:20] 2025-10-13 05:38:23,315 | INFO     | zombie collector waiting for pid 3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:23,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:47:20] 2025-10-13 05:38:23,315 | INFO     | collected zombie processes
[2025-10-13 07:47:20] 2025-10-13 05:38:23,315 | INFO     | will attempt to kill all subprocesses of pid=3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:24,058 | INFO     | process IDs to be killed: [3196623] (in reverse order)
[2025-10-13 07:47:20] 2025-10-13 05:38:24,290 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:47:20] 2025-10-13 05:38:24,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:47:20] 2025-10-13 05:38:24,322 | INFO     | did not find any defunct processes belonging to 3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:24,351 | INFO     | did not find any defunct processes belonging to 3196623
[2025-10-13 07:47:20] 2025-10-13 05:38:24,351 | INFO     | ready for new job
[2025-10-13 07:47:20] 2025-10-13 05:38:24,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:47:20] 2025-10-13 05:38:24,354 | INFO     | ***************************************
[2025-10-13 07:47:20] 2025-10-13 05:38:24,354 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:47:20] 2025-10-13 05:38:24,354 | INFO     | ***************************************
[2025-10-13 07:47:20] 2025-10-13 05:38:24,354 | INFO     | 
[2025-10-13 07:47:20] 2025-10-13 05:38:24,362 | INFO     | architecture information:
[2025-10-13 07:47:20] 2025-10-13 05:38:24,363 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:47:20] 2025-10-13 05:38:24,386 | INFO     | cat /etc/os-release:
[2025-10-13 07:47:20] NAME="CentOS Linux"
[2025-10-13 07:47:20] VERSION="7 (Core)"
[2025-10-13 07:47:20] ID="centos"
[2025-10-13 07:47:20] ID_LIKE="rhel fedora"
[2025-10-13 07:47:20] VERSION_ID="7"
[2025-10-13 07:47:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:47:20] ANSI_COLOR="0;31"
[2025-10-13 07:47:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:47:20] HOME_URL="https://www.centos.org/"
[2025-10-13 07:47:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:47:20] 
[2025-10-13 07:47:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:47:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:47:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:47:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:47:20] 
[2025-10-13 07:47:20] 2025-10-13 05:38:24,387 | INFO     | ***************************************
[2025-10-13 07:47:20] 2025-10-13 05:38:24,890 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-13 07:47:20] 2025-10-13 05:38:24,918 | INFO     | sufficient remaining disk space (3340951879680 B)
[2025-10-13 07:47:20] 2025-10-13 05:38:24,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:47:20] 2025-10-13 05:38:24,919 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:47:20] 2025-10-13 05:38:24,919 | INFO     | update_server=False
[2025-10-13 07:47:20] 2025-10-13 05:38:24,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:47:20] 2025-10-13 05:38:24,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:47:20] 2025-10-13 05:38:24,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:47:20] 2025-10-13 05:38:24,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:47:20] 2025-10-13 05:38:24,921 | INFO     | aborting loop
[2025-10-13 07:47:20] 2025-10-13 05:38:25,275 | INFO     | all payload control threads have been joined
[2025-10-13 07:47:20] 2025-10-13 05:38:25,673 | INFO     | all data control threads have been joined
[2025-10-13 07:47:20] 2025-10-13 05:38:25,924 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:25,927 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:25,972 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,090 | INFO     | all job control threads have been joined
[2025-10-13 07:47:20] 2025-10-13 05:38:26,280 | INFO     | [payload] control thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,552 | INFO     | [job] validate thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,678 | INFO     | [data] control thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,791 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,872 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:26,926 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:27,004 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:27,070 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:27,096 | INFO     | [job] control thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:27,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:47:20] 2025-10-13 05:38:28,105 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:28,927 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:35,911 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:47:20] 2025-10-13 05:38:36,916 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:47:20] 2025-10-13 05:38:53,388 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:47:20] 2025-10-13 05:38:54,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23068727359296)>', '<ExcThread(monitor, started 23068489516800)>']
[2025-10-13 07:47:20] 2025-10-13 05:38:55,123 | INFO     | PID=3188747 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | INFO     | .. there are 8 such processes running
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:47:20] 2025-10-13 05:38:55,124 | INFO     | [monitor] control thread has ended
[2025-10-13 07:47:20] 2025-10-13 05:38:59,323 | INFO     | all workflow threads have been joined
[2025-10-13 07:47:20] 2025-10-13 05:38:59,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:47:20] 2025-10-13 05:38:59,323 | INFO     | traces error code: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:59,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:47:20] 2025-10-13 05:38:59,494 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:47:20] 2025-10-13 05:38:59,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:47:20] 2025-10-13 05:38:59,502 [wrapper] pilotpid: 3188747
[2025-10-13 07:47:20] 2025-10-13 05:38:59,505 [wrapper] Pilot exit status: 0
[2025-10-13 07:47:20] 2025-10-13 05:38:59,516 [wrapper] pandaids: 6838849802
[2025-10-13 07:47:20] 2025-10-13 05:38:59,658 [wrapper] cleanup supervisor_pilot 3540774 3188748
[2025-10-13 07:47:20] 2025-10-13 05:38:59,662 [wrapper] Test setup, not cleaning
[2025-10-13 07:47:20] 2025-10-13 05:38:59,666 [wrapper] apfmon messages muted
[2025-10-13 07:47:20] 2025-10-13 05:38:59,669 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:47:20] 2025-10-13 05:38:59,672 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:47:20]  *** Error codes and diagnostics ***
[2025-10-13 07:47:20]     "exeErrorCode": 0,
[2025-10-13 07:47:20]     "exeErrorDiag": "",
[2025-10-13 07:47:20]     "pilotErrorCode": 0,
[2025-10-13 07:47:20]     "pilotErrorDiag": "",
[2025-10-13 07:47:20]  *** Listing of results directory ***
[2025-10-13 07:47:20] total 406268
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc    557409 Oct 11 20:41 pilot3.tar.gz
[2025-10-13 07:47:20] -rwx------ 1 boinc boinc     36292 Oct 11 20:49 runpilot2-wrapper.sh
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc      5112 Oct 11 20:49 queuedata.json
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:47:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:11 run_atlas
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:11 job.xml
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc 218834856 Oct 13 05:11 EVNT.46676267._002533.pool.root.1
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc      6687 Oct 13 05:11 init_data.xml
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:11 start_atlas.sh
[2025-10-13 07:47:20] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:11 shared
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:11 input.tar.gz
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:11 boinc_lockfile
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:11 pandaJob.out
[2025-10-13 07:47:20] -rw------- 1 boinc boinc    974373 Oct 13 05:11 agis_schedconf.cvmfs.json
[2025-10-13 07:47:20] -rw------- 1 boinc boinc   1560580 Oct 13 05:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:47:20] drwx------ 5 boinc boinc      4096 Oct 13 05:11 pilot3
[2025-10-13 07:47:20] -rw------- 1 boinc boinc 190165584 Oct 13 07:37 HITS.46676269._063063.pool.root.1
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc       528 Oct 13 07:37 boinc_task_state.xml
[2025-10-13 07:47:20] -rw------- 1 boinc boinc        95 Oct 13 07:37 pilot_heartbeat.json
[2025-10-13 07:47:20] -rw------- 1 boinc boinc      1026 Oct 13 07:38 memory_monitor_summary.json
[2025-10-13 07:47:20] -rw------- 1 boinc boinc    316225 Oct 13 07:38 log.46676269._063063.job.log.tgz.1
[2025-10-13 07:47:20] -rw------- 1 boinc boinc      7779 Oct 13 07:38 heartbeat.json
[2025-10-13 07:47:20] -rw------- 1 boinc boinc      4907 Oct 13 07:38 pilotlog.txt
[2025-10-13 07:47:20] -rw------- 1 boinc boinc   1240709 Oct 13 07:38 log.46676269._063063.job.log.1
[2025-10-13 07:47:20] -rw------- 1 boinc boinc       357 Oct 13 07:38 output.list
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:38 runtime_log
[2025-10-13 07:47:20] -rw------- 1 boinc boinc   1576960 Oct 13 07:38 result.tar.gz
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc      9084 Oct 13 07:38 runtime_log.err
[2025-10-13 07:47:20] -rw------- 1 boinc boinc       662 Oct 13 07:38 0MIKDmAqtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0JhNDmAAu9Fn.diag
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:47 boinc_mmap_file
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc        26 Oct 13 07:47 wrapper_checkpoint.txt
[2025-10-13 07:47:20] -rw-r--r-- 1 boinc boinc     20664 Oct 13 07:47 stderr.txt
[2025-10-13 07:47:20] HITS file was successfully produced:
[2025-10-13 07:47:20] -rw------- 1 boinc boinc 190165584 Oct 13 07:37 shared/HITS.pool.root.1
[2025-10-13 07:47:20]  *** Contents of shared directory: ***
[2025-10-13 07:47:20] total 401544
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc 218834856 Oct 13 05:11 ATLAS.root_0
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:11 start_atlas.sh
[2025-10-13 07:47:20] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:11 input.tar.gz
[2025-10-13 07:47:20] -rw------- 1 boinc boinc 190165584 Oct 13 07:37 HITS.pool.root.1
[2025-10-13 07:47:20] -rw------- 1 boinc boinc   1576960 Oct 13 07:38 result.tar.gz
07:47:22 (3184728): run_atlas exited; CPU time 34213.062383
07:47:22 (3184728): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN