Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:00 (828312): wrapper (7.7.26015): starting
21:23:00 (828312): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:23:00] Arguments: --nthreads 8
[2025-10-11 21:23:00] Threads: 8
[2025-10-11 21:23:00] Checking for CVMFS
[2025-10-11 21:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:23:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:23:04] 2.13.2.0 2356181 128597 257676 151602 1 102 24545111 32935937 30027 16776704 0 120556776 99.725 91237430 30459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:23:04] CVMFS is ok
[2025-10-11 21:23:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:23:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:23:04] Further information can be found at the LHC@home message board.
[2025-10-11 21:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:23:04] Checking for apptainer binary...
[2025-10-11 21:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:23:04] Running /usr/bin/apptainer --version
[2025-10-11 21:23:04] apptainer version 1.4.3-1.el9
[2025-10-11 21:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:23:05] c-6-2.aglt2.org
[2025-10-11 21:23:05] apptainer works
[2025-10-11 21:23:06] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:23:06] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:23:06] Starting ATLAS job with PandaID=6838849759
[2025-10-11 21:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:31:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:31:07] 2025-10-12 09:59:01,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:31:07] 2025-10-12 09:59:02,633 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 06:31:07] 2025-10-12 09:59:02,957 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.035225000001
[2025-10-12 06:31:07] 2025-10-12 09:59:03,020 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838849759/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,052 | INFO     | extracted standard info from prmon json
[2025-10-12 06:31:07] 2025-10-12 09:59:03,052 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:31:07] 2025-10-12 09:59:03,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:31:07] 2025-10-12 09:59:03,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:31:07] 2025-10-12 09:59:03,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:31:07] 2025-10-12 09:59:03,081 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:31:07] 2025-10-12 09:59:03,082 | INFO     | sum of square deviations: 39698003135.99193
[2025-10-12 06:31:07] 2025-10-12 09:59:03,088 | INFO     | sum of deviations: -95679950989.38092
[2025-10-12 06:31:07] 2025-10-12 09:59:03,133 | INFO     | mean x: 1760247708.5039682
[2025-10-12 06:31:07] 2025-10-12 09:59:03,134 | INFO     | mean y: 2085572.1904761905
[2025-10-12 06:31:07] 2025-10-12 09:59:03,134 | INFO     | -- intersect: 4244626787.7241244
[2025-10-12 06:31:07] 2025-10-12 09:59:03,134 | INFO     | intersect: 4244626787.7241244
[2025-10-12 06:31:07] 2025-10-12 09:59:03,135 | INFO     | chi2: 3.7400496123529665
[2025-10-12 06:31:07] 2025-10-12 09:59:03,169 | INFO     | sum of square deviations: 38528318737.92795
[2025-10-12 06:31:07] 2025-10-12 09:59:03,191 | INFO     | sum of deviations: -64194288468.72141
[2025-10-12 06:31:07] 2025-10-12 09:59:03,191 | INFO     | mean x: 1760247556.0120242
[2025-10-12 06:31:07] 2025-10-12 09:59:03,191 | INFO     | mean y: 2089652.1202404809
[2025-10-12 06:31:07] 2025-10-12 09:59:03,228 | INFO     | -- intersect: 2934941203.6145105
[2025-10-12 06:31:07] 2025-10-12 09:59:03,228 | INFO     | intersect: 2934941203.6145105
[2025-10-12 06:31:07] 2025-10-12 09:59:03,229 | INFO     | chi2: 3.0908991290994514
[2025-10-12 06:31:07] 2025-10-12 09:59:03,229 | INFO     | current chi2=3.0908991290994514 (change=17.356734549976117 %)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,229 | INFO     | right removable region: 498
[2025-10-12 06:31:07] 2025-10-12 09:59:03,230 | INFO     | sum of square deviations: 38528071443.927925
[2025-10-12 06:31:07] 2025-10-12 09:59:03,302 | INFO     | sum of deviations: -186215595969.2506
[2025-10-12 06:31:07] 2025-10-12 09:59:03,303 | INFO     | mean x: 1760247861.0120242
[2025-10-12 06:31:07] 2025-10-12 09:59:03,303 | INFO     | mean y: 2097344.2084168335
[2025-10-12 06:31:07] 2025-10-12 09:59:03,303 | INFO     | -- intersect: 8509805937.123522
[2025-10-12 06:31:07] 2025-10-12 09:59:03,303 | INFO     | intersect: 8509805937.123522
[2025-10-12 06:31:07] 2025-10-12 09:59:03,304 | INFO     | chi2: 1.6925761907684078
[2025-10-12 06:31:07] 2025-10-12 09:59:03,304 | INFO     | current chi2=1.6925761907684078 (change=54.74455244716493 %)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,330 | INFO     | sum of square deviations: 37381379929.336006
[2025-10-12 06:31:07] 2025-10-12 09:59:03,357 | INFO     | sum of deviations: -204678139396.92728
[2025-10-12 06:31:07] 2025-10-12 09:59:03,357 | INFO     | mean x: 1760248013.5182185
[2025-10-12 06:31:07] 2025-10-12 09:59:03,394 | INFO     | mean y: 2099787.491902834
[2025-10-12 06:31:07] 2025-10-12 09:59:03,394 | INFO     | -- intersect: 9640167963.816872
[2025-10-12 06:31:07] 2025-10-12 09:59:03,394 | INFO     | intersect: 9640167963.816872
[2025-10-12 06:31:07] 2025-10-12 09:59:03,395 | INFO     | chi2: 1.5265517952720487
[2025-10-12 06:31:07] 2025-10-12 09:59:03,395 | INFO     | current chi2=1.5265517952720487 (change=9.808976186825968 %)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,395 | INFO     | left removable region: 20
[2025-10-12 06:31:07] 2025-10-12 09:59:03,396 | INFO     | sum of square deviations: 33865759953.246746
[2025-10-12 06:31:07] 2025-10-12 09:59:03,509 | INFO     | sum of deviations: -136664301126.28874
[2025-10-12 06:31:07] 2025-10-12 09:59:03,509 | INFO     | mean x: 1760248135.5230126
[2025-10-12 06:31:07] 2025-10-12 09:59:03,509 | INFO     | mean y: 2099676.6171548115
[2025-10-12 06:31:07] 2025-10-12 09:59:03,509 | INFO     | -- intersect: 7105530445.1046715
[2025-10-12 06:31:07] 2025-10-12 09:59:03,510 | INFO     | intersect: 7105530445.1046715
[2025-10-12 06:31:07] 2025-10-12 09:59:03,510 | INFO     | chi2: 0.8023107438930348
[2025-10-12 06:31:07] 2025-10-12 09:59:03,511 | INFO     | -- intersect: 7105530445.1046715
[2025-10-12 06:31:07] 2025-10-12 09:59:03,511 | INFO     | current memory leak: -4.04 B/s (using 478 data points, chi2=0.80)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,512 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2025-10-12 06:31:07] 2025-10-12 09:59:03,512 | INFO     | ..............................
[2025-10-12 06:31:07] 2025-10-12 09:59:03,512 | INFO     | . Timing measurements:
[2025-10-12 06:31:07] 2025-10-12 09:59:03,512 | INFO     | . get job = 0 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,532 | INFO     | . initial setup = 4 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | . payload setup = 37 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | . stage-in = 0 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | . payload execution = 30754 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | . stage-out = 11 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | . log creation = 1 s
[2025-10-12 06:31:07] 2025-10-12 09:59:03,533 | INFO     | ..............................
[2025-10-12 06:31:07] 2025-10-12 09:59:04,987 | INFO     | 
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | job summary report
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | --------------------------------------------------
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | PanDA job id: 6838849759
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | task id: 46676269
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | errors: (none)
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | pilot state: finished 
[2025-10-12 06:31:07] 2025-10-12 09:59:04,988 | INFO     | transexitcode: 0
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | exeerrorcode: 0
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | exeerrordiag: 
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | exitcode: 0
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | exitmsg: OK
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | cpuconsumptiontime: 50122 s
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | nevents: 400
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | neventsw: 0
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | pid: 841311
[2025-10-12 06:31:07] 2025-10-12 09:59:04,989 | INFO     | pgrp: 841311
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | corecount: 8
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | event service: False
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348941, 5: 2349153, 17: 2349153, 28: 2349471, 39: 2349471, 30797: 2386488, 30800: 2386487, 30813: 23958
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | --------------------------------------------------
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | 
[2025-10-12 06:31:07] 2025-10-12 09:59:04,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 06:31:07] 2025-10-12 09:59:05,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:31:07] 2025-10-12 09:59:05,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:31:07] 2025-10-12 09:59:05,133 | INFO     | job 6838849759 has completed (purged errors)
[2025-10-12 06:31:07] 2025-10-12 09:59:05,133 | INFO     | overall cleanup function is called
[2025-10-12 06:31:07] 2025-10-12 09:59:06,445 | INFO     | --- collectZombieJob: --- 10, [841311]
[2025-10-12 06:31:07] 2025-10-12 09:59:06,446 | INFO     | zombie collector waiting for pid 841311
[2025-10-12 06:31:07] 2025-10-12 09:59:06,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:31:07] 2025-10-12 09:59:06,446 | INFO     | collected zombie processes
[2025-10-12 06:31:07] 2025-10-12 09:59:06,446 | INFO     | will attempt to kill all subprocesses of pid=841311
[2025-10-12 06:31:07] 2025-10-12 09:59:13,023 | INFO     | PID=832929 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:31:07] 2025-10-12 09:59:13,023 | INFO     | .. there are 43 such processes running
[2025-10-12 06:31:07] 2025-10-12 09:59:14,608 | INFO     | process IDs to be killed: [841311] (in reverse order)
[2025-10-12 06:31:07] 2025-10-12 09:59:15,099 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:31:07] 2025-10-12 09:59:15,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:31:07] 2025-10-12 09:59:15,133 | INFO     | did not find any defunct processes belonging to 841311
[2025-10-12 06:31:07] 2025-10-12 09:59:15,176 | INFO     | did not find any defunct processes belonging to 841311
[2025-10-12 06:31:07] 2025-10-12 09:59:15,176 | INFO     | ready for new job
[2025-10-12 06:31:07] 2025-10-12 09:59:15,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:31:07] 2025-10-12 09:59:15,179 | INFO     | ***************************************
[2025-10-12 06:31:07] 2025-10-12 09:59:15,180 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:31:07] 2025-10-12 09:59:15,180 | INFO     | ***************************************
[2025-10-12 06:31:07] 2025-10-12 09:59:15,180 | INFO     | 
[2025-10-12 06:31:07] 2025-10-12 09:59:15,196 | INFO     | architecture information:
[2025-10-12 06:31:07] 2025-10-12 09:59:15,201 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:31:07] 2025-10-12 09:59:15,296 | INFO     | cat /etc/os-release:
[2025-10-12 06:31:07] NAME="CentOS Linux"
[2025-10-12 06:31:07] VERSION="7 (Core)"
[2025-10-12 06:31:07] ID="centos"
[2025-10-12 06:31:07] ID_LIKE="rhel fedora"
[2025-10-12 06:31:07] VERSION_ID="7"
[2025-10-12 06:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:31:07] ANSI_COLOR="0;31"
[2025-10-12 06:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:31:07] HOME_URL="https://www.centos.org/"
[2025-10-12 06:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:31:07] 
[2025-10-12 06:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:31:07] 
[2025-10-12 06:31:07] 2025-10-12 09:59:15,296 | INFO     | ***************************************
[2025-10-12 06:31:07] 2025-10-12 09:59:15,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 06:31:07] 2025-10-12 09:59:15,847 | INFO     | sufficient remaining disk space (74644979712 B)
[2025-10-12 06:31:07] 2025-10-12 09:59:15,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:31:07] 2025-10-12 09:59:15,848 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:31:07] 2025-10-12 09:59:15,848 | INFO     | update_server=False
[2025-10-12 06:31:07] 2025-10-12 09:59:15,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:31:07] 2025-10-12 09:59:15,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:31:07] 2025-10-12 09:59:15,913 | INFO     | aborting loop
[2025-10-12 06:31:07] 2025-10-12 09:59:16,106 | INFO     | all payload control threads have been joined
[2025-10-12 06:31:07] 2025-10-12 09:59:16,295 | INFO     | all job control threads have been joined
[2025-10-12 06:31:07] 2025-10-12 09:59:16,345 | INFO     | all data control threads have been joined
[2025-10-12 06:31:07] 2025-10-12 09:59:16,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:31:07] 2025-10-12 09:59:16,855 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:16,921 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:16,966 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,112 | INFO     | [payload] control thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,141 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,185 | INFO     | [job] validate thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,302 | INFO     | [job] control thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,327 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,352 | INFO     | [data] control thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,404 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,436 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:17,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:31:07] 2025-10-12 09:59:18,115 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:18,369 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:18,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:31:07] 2025-10-12 09:59:19,414 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:21,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:31:07] 2025-10-12 09:59:57,186 | INFO     | PID=832929 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:31:07] 2025-10-12 09:59:57,187 | INFO     | .. there are 43 such processes running
[2025-10-12 06:31:07] 2025-10-12 09:59:57,191 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:31:07] 2025-10-12 09:59:57,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:31:07] 2025-10-12 09:59:57,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:31:07] 2025-10-12 10:00:06,005 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:31:07] 2025-10-12 10:00:07,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951317120832)>', '<ExcThread(monitor, started 139950796285696)>']
[2025-10-12 06:31:07] 2025-10-12 10:00:07,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:31:07] 2025-10-12 10:00:07,302 | INFO     | [monitor] control thread has ended
[2025-10-12 06:31:07] 2025-10-12 10:00:12,143 | INFO     | all workflow threads have been joined
[2025-10-12 06:31:07] 2025-10-12 10:00:12,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:31:07] 2025-10-12 10:00:12,144 | INFO     | traces error code: 0
[2025-10-12 06:31:07] 2025-10-12 10:00:12,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:31:07] 2025-10-12 10:00:13,711 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:31:07] 2025-10-12 10:00:13,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:31:07] 2025-10-12 10:00:13,716 [wrapper] pilotpid: 832929
[2025-10-12 06:31:07] 2025-10-12 10:00:13,718 [wrapper] Pilot exit status: 0
[2025-10-12 06:31:07] 2025-10-12 10:00:13,731 [wrapper] pandaids: 6838849759
[2025-10-12 06:31:07] 2025-10-12 10:00:13,867 [wrapper] cleanup supervisor_pilot 2430232 832930
[2025-10-12 06:31:07] 2025-10-12 10:00:13,888 [wrapper] Test setup, not cleaning
[2025-10-12 06:31:07] 2025-10-12 10:00:13,898 [wrapper] apfmon messages muted
[2025-10-12 06:31:07] 2025-10-12 10:00:13,901 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:31:07] 2025-10-12 10:00:13,904 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:31:07]  *** Error codes and diagnostics ***
[2025-10-12 06:31:07]     "exeErrorCode": 0,
[2025-10-12 06:31:07]     "exeErrorDiag": "",
[2025-10-12 06:31:07]     "pilotErrorCode": 0,
[2025-10-12 06:31:07]     "pilotErrorDiag": "",
[2025-10-12 06:31:07]  *** Listing of results directory ***
[2025-10-12 06:31:07] total 415416
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:41 pilot3.tar.gz
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:47 queuedata.json
[2025-10-12 06:31:07] -rwx------. 1 boincer umatlas     36292 Oct 11 14:48 runpilot2-wrapper.sh
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:31:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:22 run_atlas
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:22 job.xml
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas 218571268 Oct 11 21:23 EVNT.46676267._002531.pool.root.1
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:23 start_atlas.sh
[2025-10-12 06:31:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:23 shared
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:23 input.tar.gz
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:23 boinc_lockfile
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 21:23 pandaJob.out
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas    975496 Oct 11 21:23 agis_schedconf.cvmfs.json
[2025-10-12 06:31:07] drwx------. 5 boincer umatlas      4096 Oct 11 21:24 pilot3
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas 195285498 Oct 12 05:56 HITS.46676269._063020.pool.root.1
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:56 boinc_task_state.xml
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas      1042 Oct 12 05:58 memory_monitor_summary.json
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas    624951 Oct 12 05:58 log.46676269._063020.job.log.tgz.1
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas      7821 Oct 12 05:59 heartbeat.json
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas        95 Oct 12 05:59 pilot_heartbeat.json
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas      4823 Oct 12 06:00 pilotlog.txt
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas   3187032 Oct 12 06:00 log.46676269._063020.job.log.1
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas       357 Oct 12 06:00 output.list
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:00 runtime_log
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas   3829760 Oct 12 06:00 result.tar.gz
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 06:00 runtime_log.err
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas       655 Oct 12 06:00 ofIODmBptR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPJhNDm3PCDXo.diag
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 06:28 init_data.xml
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:31 wrapper_checkpoint.txt
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:31 boinc_mmap_file
[2025-10-12 06:31:07] -rw-r--r--. 1 boincer umatlas     21327 Oct 12 06:31 stderr.txt
[2025-10-12 06:31:07] HITS file was successfully produced:
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas 195285498 Oct 12 05:56 shared/HITS.pool.root.1
[2025-10-12 06:31:07]  *** Contents of shared directory: ***
[2025-10-12 06:31:07] total 408484
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas 218571268 Oct 11 21:23 ATLAS.root_0
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:23 start_atlas.sh
[2025-10-12 06:31:07] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:23 input.tar.gz
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas 195285498 Oct 12 05:56 HITS.pool.root.1
[2025-10-12 06:31:07] -rw-------. 1 boincer umatlas   3829760 Oct 12 06:00 result.tar.gz
06:31:09 (828312): run_atlas exited; CPU time 51234.470253
06:31:09 (828312): called boinc_finish(0)

</stderr_txt>
]]>

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