Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:11:50 (982917): wrapper (7.7.26015): starting
22:11:50 (982917): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 22:11:50] Arguments: --nthreads 4
[2025-10-11 22:11:50] Threads: 4
[2025-10-11 22:11:50] Checking for CVMFS
[2025-10-11 22:11:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:11:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:11:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:11:50] 2.11.5.0 2691367 3779 110124 151602 0 188 2997514 4096000 6410 130560 0 18600707 99.998 126997 2741 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 22:11:50] CVMFS is ok
[2025-10-11 22:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:11:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 22:11:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 22:11:50] Further information can be found at the LHC@home message board.
[2025-10-11 22:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:11:50] Checking for apptainer binary...
[2025-10-11 22:11:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:11:50] Running /usr/bin/apptainer --version
[2025-10-11 22:11:50] apptainer version 1.4.3
[2025-10-11 22:11:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:11:50] x32-linux3
[2025-10-11 22:11:50] apptainer works
[2025-10-11 22:11:50] Set ATHENA_PROC_NUMBER=4
[2025-10-11 22:11:50] Set ATHENA_CORE_NUMBER=4
[2025-10-11 22:11:50] Starting ATLAS job with PandaID=6838849799
[2025-10-11 22:11:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:13:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:13:18] 2025-10-12 04:12:37,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:13:18] 2025-10-12 04:12:37,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:13:18] 2025-10-12 04:12:37,055 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:13:18] 2025-10-12 04:12:37,055 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,055 | INFO     | sum of deviations: -2774096024.000002
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | mean x: 1760238740.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | mean y: 2289442.369747899
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | -- intersect: 9347829988.782057
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | intersect: 9347829988.782057
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | chi2: 1.9129317056066424
[2025-10-12 00:13:18] 2025-10-12 04:12:37,056 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | sum of deviations: 4434687952.500001
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | mean x: 1760238587.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | mean y: 2306256.0614035088
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | -- intersect: -16990888865.328815
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | intersect: -16990888865.328815
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | chi2: 1.132090656503252
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | current chi2=1.132090656503252 (change=40.819076123565246 %)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,057 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | sum of deviations: 4219308695.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | mean x: 1760238435.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | mean y: 2305688.247706422
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | -- intersect: -18494274417.11071
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | intersect: -18494274417.11071
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | chi2: 1.1335020350872385
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | current chi2=1.1335020350872385 (change=-0.12467010268822754 %)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | right removable region: 108
[2025-10-12 00:13:18] 2025-10-12 04:12:37,058 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | sum of deviations: -9427151853.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | mean x: 1760238892.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | mean y: 2304687.298245614
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | -- intersect: 36126032072.54048
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | intersect: 36126032072.54048
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | chi2: 0.8704796356852302
[2025-10-12 00:13:18] 2025-10-12 04:12:37,059 | INFO     | current chi2=0.8704796356852302 (change=54.49499670406803 %)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | sum of deviations: -5870220625.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | mean x: 1760239045.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | mean y: 2295473.027522936
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | -- intersect: 25736142295.495796
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | intersect: 25736142295.495796
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | chi2: 0.8149069508048465
[2025-10-12 00:13:18] 2025-10-12 04:12:37,060 | INFO     | current chi2=0.8149069508048465 (change=6.384145315086849 %)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | left removable region: 20
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | sum of deviations: 383094457.0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | mean x: 1760239014.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | mean y: 2315387.5
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | -- intersect: -3189275051.7775235
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | intersect: -3189275051.7775235
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | chi2: 5.77904070401123e-05
[2025-10-12 00:13:18] 2025-10-12 04:12:37,061 | INFO     | -- intersect: -3189275051.7775235
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | current memory leak: 1.81 B/s (using 88 data points, chi2=0.00)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | could have reported an average CPU frequency of 3815 MHz (7 samples)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | ..............................
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . Timing measurements:
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . get job = 0 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . initial setup = 2 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . payload setup = 3 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . stage-in = 0 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . payload execution = 7210 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . stage-out = 0 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,062 | INFO     | . log creation = 0 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,063 | INFO     | ..............................
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | 
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | job summary report
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | --------------------------------------------------
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | PanDA job id: 6838849799
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | task id: 46676269
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | errors: (none)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | pilot state: finished 
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | transexitcode: 0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | exeerrorcode: 0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | exeerrordiag: 
[2025-10-12 00:13:18] 2025-10-12 04:12:37,131 | INFO     | exitcode: 0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | exitmsg: OK
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | cpuconsumptiontime: 27804 s
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | nevents: 400
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | neventsw: 0
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | pid: 993407
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | pgrp: 993407
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | corecount: 4
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | event service: False
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | sizes: {0: 2348863, 3: 2349125, 11: 2349153, 7218: 2385585, 7223: 2385723}
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | --------------------------------------------------
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | 
[2025-10-12 00:13:18] 2025-10-12 04:12:37,132 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-12 00:13:18] 2025-10-12 04:12:37,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | job 6838849799 has completed (purged errors)
[2025-10-12 00:13:18] 2025-10-12 04:12:37,150 | INFO     | overall cleanup function is called
[2025-10-12 00:13:18] 2025-10-12 04:12:38,156 | INFO     | --- collectZombieJob: --- 10, [993407]
[2025-10-12 00:13:18] 2025-10-12 04:12:38,156 | INFO     | zombie collector waiting for pid 993407
[2025-10-12 00:13:18] 2025-10-12 04:12:38,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:13:18] 2025-10-12 04:12:38,156 | INFO     | collected zombie processes
[2025-10-12 00:13:18] 2025-10-12 04:12:38,156 | INFO     | will attempt to kill all subprocesses of pid=993407
[2025-10-12 00:13:18] 2025-10-12 04:12:38,297 | INFO     | process IDs to be killed: [993407] (in reverse order)
[2025-10-12 00:13:18] 2025-10-12 04:12:38,350 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:13:18] 2025-10-12 04:12:38,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:13:18] 2025-10-12 04:12:38,354 | INFO     | did not find any defunct processes belonging to 993407
[2025-10-12 00:13:18] 2025-10-12 04:12:38,358 | INFO     | did not find any defunct processes belonging to 993407
[2025-10-12 00:13:18] 2025-10-12 04:12:38,358 | INFO     | ready for new job
[2025-10-12 00:13:18] 2025-10-12 04:12:38,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:13:18] 2025-10-12 04:12:38,360 | INFO     | ***************************************
[2025-10-12 00:13:18] 2025-10-12 04:12:38,360 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:13:18] 2025-10-12 04:12:38,360 | INFO     | ***************************************
[2025-10-12 00:13:18] 2025-10-12 04:12:38,360 | INFO     | 
[2025-10-12 00:13:18] 2025-10-12 04:12:38,382 | INFO     | architecture information:
[2025-10-12 00:13:18] 2025-10-12 04:12:38,382 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:13:18] 2025-10-12 04:12:38,395 | INFO     | cat /etc/os-release:
[2025-10-12 00:13:18] NAME="CentOS Linux"
[2025-10-12 00:13:18] VERSION="7 (Core)"
[2025-10-12 00:13:18] ID="centos"
[2025-10-12 00:13:18] ID_LIKE="rhel fedora"
[2025-10-12 00:13:18] VERSION_ID="7"
[2025-10-12 00:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:13:18] ANSI_COLOR="0;31"
[2025-10-12 00:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:13:18] HOME_URL="https://www.centos.org/"
[2025-10-12 00:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:13:18] 
[2025-10-12 00:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:13:18] 
[2025-10-12 00:13:18] 2025-10-12 04:12:38,395 | INFO     | ***************************************
[2025-10-12 00:13:18] 2025-10-12 04:12:38,896 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-12 00:13:18] 2025-10-12 04:12:38,911 | INFO     | sufficient remaining disk space (396244287488 B)
[2025-10-12 00:13:18] 2025-10-12 04:12:38,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:13:18] 2025-10-12 04:12:38,911 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:13:18] 2025-10-12 04:12:38,911 | INFO     | update_server=False
[2025-10-12 00:13:18] 2025-10-12 04:12:38,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:13:18] 2025-10-12 04:12:38,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:13:18] 2025-10-12 04:12:38,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:13:18] 2025-10-12 04:12:39,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:13:18] 2025-10-12 04:12:39,279 | INFO     | aborting loop
[2025-10-12 00:13:18] 2025-10-12 04:12:39,351 | INFO     | all job control threads have been joined
[2025-10-12 00:13:18] 2025-10-12 04:12:39,792 | INFO     | all data control threads have been joined
[2025-10-12 00:13:18] 2025-10-12 04:12:39,916 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:39,916 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:39,960 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:39,996 | INFO     | all payload control threads have been joined
[2025-10-12 00:13:18] 2025-10-12 04:12:40,016 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,049 | INFO     | [job] validate thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:13:18] 2025-10-12 04:12:40,280 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,340 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,356 | INFO     | [job] control thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,380 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,516 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,536 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:40,796 | INFO     | [data] control thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:41,000 | INFO     | [payload] control thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:42,108 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:42,916 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:12:49,652 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:13:18] 2025-10-12 04:12:50,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:13:18] 2025-10-12 04:13:09,219 | INFO     | PID=986761 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 00:13:18] 2025-10-12 04:13:09,219 | INFO     | .. there are 8 such processes running
[2025-10-12 00:13:18] 2025-10-12 04:13:09,219 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:13:18] 2025-10-12 04:13:09,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:13:18] 2025-10-12 04:13:09,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:13:18] 2025-10-12 04:13:10,940 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:13:18] 2025-10-12 04:13:12,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340150900544)>', '<ExcThread(monitor, started 140339708937984)>']
[2025-10-12 00:13:18] 2025-10-12 04:13:13,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:13:18] 2025-10-12 04:13:13,237 | INFO     | [monitor] control thread has ended
[2025-10-12 00:13:18] 2025-10-12 04:13:17,884 | INFO     | all workflow threads have been joined
[2025-10-12 00:13:18] 2025-10-12 04:13:17,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:13:18] 2025-10-12 04:13:17,884 | INFO     | traces error code: 0
[2025-10-12 00:13:18] 2025-10-12 04:13:17,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:13:18] 2025-10-12 04:13:17,975 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:13:18] 2025-10-12 04:13:17,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:13:18] 2025-10-12 04:13:17,980 [wrapper] pilotpid: 986761
[2025-10-12 00:13:18] 2025-10-12 04:13:17,982 [wrapper] Pilot exit status: 0
[2025-10-12 00:13:18] 2025-10-12 04:13:17,990 [wrapper] pandaids: 6838849799
[2025-10-12 00:13:18] 2025-10-12 04:13:18,024 [wrapper] cleanup supervisor_pilot 1178497 986762
[2025-10-12 00:13:18] 2025-10-12 04:13:18,026 [wrapper] Test setup, not cleaning
[2025-10-12 00:13:18] 2025-10-12 04:13:18,028 [wrapper] apfmon messages muted
[2025-10-12 00:13:18] 2025-10-12 04:13:18,030 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:13:18] 2025-10-12 04:13:18,032 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:13:18]  *** Error codes and diagnostics ***
[2025-10-12 00:13:18]     "exeErrorCode": 0,
[2025-10-12 00:13:18]     "exeErrorDiag": "",
[2025-10-12 00:13:18]     "pilotErrorCode": 0,
[2025-10-12 00:13:18]     "pilotErrorDiag": "",
[2025-10-12 00:13:18]  *** Listing of results directory ***
[2025-10-12 00:13:18] total 408352
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:41 pilot3.tar.gz
[2025-10-12 00:13:18] -rwx------ 1 boinc boinc     36292 Oct 11 14:51 runpilot2-wrapper.sh
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:51 queuedata.json
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc       100 Oct 11 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:13:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 22:11 run_atlas
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc       105 Oct 11 22:11 job.xml
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:11 start_atlas.sh
[2025-10-12 00:13:18] drwxrwx--x 2 boinc boinc      4096 Oct 11 22:11 shared
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc    569673 Oct 11 22:11 input.tar.gz
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc      9157 Oct 11 22:11 init_data.xml
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc 218834856 Oct 11 22:11 EVNT.46676267._002533.pool.root.1
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:11 boinc_setup_complete
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:11 boinc_lockfile
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc      2549 Oct 11 22:11 pandaJob.out
[2025-10-12 00:13:18] -rw------- 1 boinc boinc    975496 Oct 11 22:11 agis_schedconf.cvmfs.json
[2025-10-12 00:13:18] -rw------- 1 boinc boinc   1560580 Oct 11 22:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:13:18] drwx------ 5 boinc boinc      4096 Oct 11 22:11 pilot3
[2025-10-12 00:13:18] -rw------- 1 boinc boinc 192739668 Oct 12 00:12 HITS.46676269._063060.pool.root.1
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc       530 Oct 12 00:12 boinc_task_state.xml
[2025-10-12 00:13:18] -rw------- 1 boinc boinc      1037 Oct 12 00:12 memory_monitor_summary.json
[2025-10-12 00:13:18] -rw------- 1 boinc boinc    288031 Oct 12 00:12 log.46676269._063060.job.log.tgz.1
[2025-10-12 00:13:18] -rw------- 1 boinc boinc      7743 Oct 12 00:12 heartbeat.json
[2025-10-12 00:13:18] -rw------- 1 boinc boinc        95 Oct 12 00:13 pilot_heartbeat.json
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc        27 Oct 12 00:13 wrapper_checkpoint.txt
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc      8192 Oct 12 00:13 boinc_mmap_file
[2025-10-12 00:13:18] -rw------- 1 boinc boinc      4902 Oct 12 00:13 pilotlog.txt
[2025-10-12 00:13:18] -rw------- 1 boinc boinc   1044679 Oct 12 00:13 log.46676269._063060.job.log.1
[2025-10-12 00:13:18] -rw------- 1 boinc boinc       357 Oct 12 00:13 output.list
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc       620 Oct 12 00:13 runtime_log
[2025-10-12 00:13:18] -rw------- 1 boinc boinc   1351680 Oct 12 00:13 result.tar.gz
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc      8764 Oct 12 00:13 runtime_log.err
[2025-10-12 00:13:18] -rw------- 1 boinc boinc       644 Oct 12 00:13 ILnLDmCstR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSKhNDmVaXEgm.diag
[2025-10-12 00:13:18] -rw-r--r-- 1 boinc boinc     20884 Oct 12 00:13 stderr.txt
[2025-10-12 00:13:18] HITS file was successfully produced:
[2025-10-12 00:13:18] -rw------- 1 boinc boinc 192739668 Oct 12 00:12 shared/HITS.pool.root.1
[2025-10-12 00:13:18]  *** Contents of shared directory: ***
[2025-10-12 00:13:18] total 403836
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:11 start_atlas.sh
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc    569673 Oct 11 22:11 input.tar.gz
[2025-10-12 00:13:18] -rw-r--r-- 2 boinc boinc 218834856 Oct 11 22:11 ATLAS.root_0
[2025-10-12 00:13:18] -rw------- 1 boinc boinc 192739668 Oct 12 00:12 HITS.pool.root.1
[2025-10-12 00:13:18] -rw------- 1 boinc boinc   1351680 Oct 12 00:13 result.tar.gz
00:13:19 (982917): run_atlas exited; CPU time 27886.003226
00:13:19 (982917): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN