Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:54:23 (352024): wrapper (7.7.26015): starting
19:54:23 (352024): wrapper: running run_atlas (--nthreads 10)
[2025-10-11 19:54:23] Arguments: --nthreads 10
[2025-10-11 19:54:23] Threads: 10
[2025-10-11 19:54:23] Checking for CVMFS
[2025-10-11 19:54:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:54:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:54:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:54:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:54:25] 2.13.2.0 2038924 67814 226280 151600 1 791 28914409 32503809 66825 16776704 0 435545550 99.744 305298460 34642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:54:25] CVMFS is ok
[2025-10-11 19:54:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:54:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:54:25] Further information can be found at the LHC@home message board.
[2025-10-11 19:54:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:54:25] Checking for apptainer binary...
[2025-10-11 19:54:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:54:25] Running /usr/bin/apptainer --version
[2025-10-11 19:54:25] apptainer version 1.4.3-1.el9
[2025-10-11 19:54:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:54:26] c8-7-1.aglt2.org
[2025-10-11 19:54:26] apptainer works
[2025-10-11 19:54:26] Set ATHENA_PROC_NUMBER=10
[2025-10-11 19:54:26] Set ATHENA_CORE_NUMBER=10
[2025-10-11 19:54:26] Starting ATLAS job with PandaID=6838451533
[2025-10-11 19:54:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:40:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:40:11] 2025-10-12 01:39:03,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:05,732 | INFO     | PID=369210 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:40:11] 2025-10-12 01:39:05,732 | INFO     | .. there are 89 such processes running
[2025-10-11 21:40:11] 2025-10-12 01:39:05,915 | INFO     | monitor loop #391: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:05,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:06,733 | INFO     | time since job start (6193s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:08,423 | INFO     | monitor loop #392: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:08,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:08,751 | INFO     | time since job start (6195s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:10,775 | INFO     | time since job start (6197s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:10,941 | INFO     | monitor loop #393: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:10,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:12,785 | INFO     | time since job start (6199s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:13,449 | INFO     | monitor loop #394: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:13,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:14,794 | INFO     | time since job start (6201s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:15,956 | INFO     | monitor loop #395: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:15,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:16,809 | INFO     | time since job start (6203s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:18,470 | INFO     | monitor loop #396: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:18,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:18,816 | INFO     | time since job start (6205s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:20,823 | INFO     | time since job start (6207s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:20,995 | INFO     | monitor loop #397: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:20,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:22,833 | INFO     | time since job start (6209s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:23,504 | INFO     | monitor loop #398: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:23,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:24,841 | INFO     | time since job start (6211s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:26,009 | INFO     | monitor loop #399: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:26,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:26,848 | INFO     | time since job start (6213s) is within the limit (172800.0s)
[2025-10-11 21:40:11] 2025-10-12 01:39:28,531 | INFO     | monitor loop #400: job 0:6838451533 is in state 'finished'
[2025-10-11 21:40:11] 2025-10-12 01:39:28,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:40:11] 2025-10-12 01:39:28,737 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 21:40:11] 2025-10-12 01:39:28,749 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.994843749998
[2025-10-11 21:40:11] 2025-10-12 01:39:28,805 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838451533/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:40:11] 2025-10-12 01:39:28,806 | INFO     | extracted standard info from prmon json
[2025-10-11 21:40:11] 2025-10-12 01:39:28,806 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:40:11] 2025-10-12 01:39:28,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:40:11] 2025-10-12 01:39:28,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:40:11] 2025-10-12 01:39:28,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | sum of square deviations: 241453261.68478242
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | sum of deviations: 2834585275.304349
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | mean x: 1760230176.6195652
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | mean y: 2245159.6086956523
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | -- intersect: -20662302939.58419
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | intersect: -20662302939.58419
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | chi2: 0.18687740126405905
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | -- intersect: -20662302939.58419
[2025-10-11 21:40:11] 2025-10-12 01:39:28,808 | INFO     | current memory leak: 11.74 B/s (using 92 data points, chi2=0.19)
[2025-10-11 21:40:11] 2025-10-12 01:39:28,809 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | ..............................
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . Timing measurements:
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . get job = 0 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . initial setup = 5 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . payload setup = 43 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . stage-in = 0 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . payload execution = 6068 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . stage-out = 1 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | . log creation = 0 s
[2025-10-11 21:40:11] 2025-10-12 01:39:28,837 | INFO     | ..............................
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | 
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | job summary report
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | --------------------------------------------------
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | PanDA job id: 6838451533
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | task id: 46676269
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | errors: (none)
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | pilot state: finished 
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | transexitcode: 0
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | exeerrorcode: 0
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | exeerrordiag: 
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | exitcode: 0
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | exitmsg: OK
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | cpuconsumptiontime: 22528 s
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | nevents: 400
[2025-10-11 21:40:11] 2025-10-12 01:39:29,253 | INFO     | neventsw: 0
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | pid: 389534
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | pgrp: 389534
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | corecount: 10
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | event service: False
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2349203, 34: 2349259, 6115: 2376117, 6117: 2385115, 6118: 2385171, 6151: 2385365}
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | --------------------------------------------------
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | 
[2025-10-11 21:40:11] 2025-10-12 01:39:29,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | job 6838451533 has completed (purged errors)
[2025-10-11 21:40:11] 2025-10-12 01:39:29,450 | INFO     | overall cleanup function is called
[2025-10-11 21:40:11] 2025-10-12 01:39:29,679 | INFO     | PID=369210 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:40:11] 2025-10-12 01:39:29,680 | INFO     | .. there are 89 such processes running
[2025-10-11 21:40:11] 2025-10-12 01:39:30,464 | INFO     | --- collectZombieJob: --- 10, [389534]
[2025-10-11 21:40:11] 2025-10-12 01:39:30,478 | INFO     | zombie collector waiting for pid 389534
[2025-10-11 21:40:11] 2025-10-12 01:39:30,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:40:11] 2025-10-12 01:39:30,479 | INFO     | collected zombie processes
[2025-10-11 21:40:11] 2025-10-12 01:39:30,479 | INFO     | will attempt to kill all subprocesses of pid=389534
[2025-10-11 21:40:11] 2025-10-12 01:39:32,415 | INFO     | process IDs to be killed: [389534] (in reverse order)
[2025-10-11 21:40:11] 2025-10-12 01:39:32,883 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:40:11] 2025-10-12 01:39:32,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:40:11] 2025-10-12 01:39:32,943 | INFO     | did not find any defunct processes belonging to 389534
[2025-10-11 21:40:11] 2025-10-12 01:39:32,991 | INFO     | did not find any defunct processes belonging to 389534
[2025-10-11 21:40:11] 2025-10-12 01:39:32,991 | INFO     | ready for new job
[2025-10-11 21:40:11] 2025-10-12 01:39:32,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:40:11] 2025-10-12 01:39:32,993 | INFO     | ***************************************
[2025-10-11 21:40:11] 2025-10-12 01:39:32,993 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:40:11] 2025-10-12 01:39:32,993 | INFO     | ***************************************
[2025-10-11 21:40:11] 2025-10-12 01:39:32,993 | INFO     | 
[2025-10-11 21:40:11] 2025-10-12 01:39:33,012 | INFO     | architecture information:
[2025-10-11 21:40:11] 2025-10-12 01:39:33,014 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:40:11] 2025-10-12 01:39:33,134 | INFO     | cat /etc/os-release:
[2025-10-11 21:40:11] NAME="CentOS Linux"
[2025-10-11 21:40:11] VERSION="7 (Core)"
[2025-10-11 21:40:11] ID="centos"
[2025-10-11 21:40:11] ID_LIKE="rhel fedora"
[2025-10-11 21:40:11] VERSION_ID="7"
[2025-10-11 21:40:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:40:11] ANSI_COLOR="0;31"
[2025-10-11 21:40:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:40:11] HOME_URL="https://www.centos.org/"
[2025-10-11 21:40:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:40:11] 
[2025-10-11 21:40:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:40:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:40:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:40:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:40:11] 
[2025-10-11 21:40:11] 2025-10-12 01:39:33,135 | INFO     | ***************************************
[2025-10-11 21:40:11] 2025-10-12 01:39:33,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 21:40:11] 2025-10-12 01:39:33,753 | INFO     | sufficient remaining disk space (91962212352 B)
[2025-10-11 21:40:11] 2025-10-12 01:39:33,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:40:11] 2025-10-12 01:39:33,753 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:40:11] 2025-10-12 01:39:33,753 | INFO     | update_server=False
[2025-10-11 21:40:11] 2025-10-12 01:39:33,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:40:11] 2025-10-12 01:39:33,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:40:11] 2025-10-12 01:39:33,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:40:11] 2025-10-12 01:39:34,106 | INFO     | all payload control threads have been joined
[2025-10-11 21:40:11] 2025-10-12 01:39:34,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:40:11] 2025-10-12 01:39:34,409 | INFO     | all job control threads have been joined
[2025-10-11 21:40:11] 2025-10-12 01:39:34,492 | INFO     | all data control threads have been joined
[2025-10-11 21:40:11] 2025-10-12 01:39:34,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:40:11] 2025-10-12 01:39:34,592 | INFO     | aborting loop
[2025-10-11 21:40:11] 2025-10-12 01:39:34,759 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:34,951 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,010 | INFO     | [job] validate thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,090 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,112 | INFO     | [payload] control thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,346 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,416 | INFO     | [job] control thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,490 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,498 | INFO     | [data] control thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,572 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,605 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,761 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:35,898 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:36,193 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:36,239 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:39:37,786 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:40:11] 2025-10-12 01:40:02,844 | INFO     | PID=369210 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:40:11] 2025-10-12 01:40:02,844 | INFO     | .. there are 89 such processes running
[2025-10-11 21:40:11] 2025-10-12 01:40:02,844 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:40:11] 2025-10-12 01:40:02,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:40:11] 2025-10-12 01:40:02,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:40:11] 2025-10-12 01:40:03,196 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:40:11] 2025-10-12 01:40:04,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844955944768)>', '<ExcThread(monitor, started 139844328089344)>']
[2025-10-11 21:40:11] 2025-10-12 01:40:04,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:40:11] 2025-10-12 01:40:04,862 | INFO     | [monitor] control thread has ended
[2025-10-11 21:40:11] 2025-10-12 01:40:09,486 | INFO     | all workflow threads have been joined
[2025-10-11 21:40:11] 2025-10-12 01:40:09,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:40:11] 2025-10-12 01:40:09,486 | INFO     | traces error code: 0
[2025-10-11 21:40:11] 2025-10-12 01:40:09,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:40:11] 2025-10-12 01:40:09,782 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:40:11] 2025-10-12 01:40:09,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:40:11] 2025-10-12 01:40:09,835 [wrapper] pilotpid: 369210
[2025-10-11 21:40:11] 2025-10-12 01:40:09,859 [wrapper] Pilot exit status: 0
[2025-10-11 21:40:11] 2025-10-12 01:40:09,970 [wrapper] pandaids: 6838451533
[2025-10-11 21:40:11] 2025-10-12 01:40:10,169 [wrapper] cleanup supervisor_pilot 1127172 369211
[2025-10-11 21:40:11] 2025-10-12 01:40:10,197 [wrapper] Test setup, not cleaning
[2025-10-11 21:40:11] 2025-10-12 01:40:10,226 [wrapper] apfmon messages muted
[2025-10-11 21:40:11] 2025-10-12 01:40:10,268 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:40:11] 2025-10-12 01:40:10,284 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:40:11]  *** Error codes and diagnostics ***
[2025-10-11 21:40:11]     "exeErrorCode": 0,
[2025-10-11 21:40:11]     "exeErrorDiag": "",
[2025-10-11 21:40:11]     "pilotErrorCode": 0,
[2025-10-11 21:40:11]     "pilotErrorDiag": "",
[2025-10-11 21:40:11]  *** Listing of results directory ***
[2025-10-11 21:40:11] total 407068
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:51 pilot3.tar.gz
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:04 queuedata.json
[2025-10-11 21:40:11] -rwx------. 1 boincer umatlas     36292 Oct 11 09:05 runpilot2-wrapper.sh
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:40:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:54 run_atlas
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:54 job.xml
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas 218043254 Oct 11 19:54 EVNT.46676267._002334.pool.root.1
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:54 start_atlas.sh
[2025-10-11 21:40:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:54 shared
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 19:54 input.tar.gz
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:54 boinc_lockfile
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:54 pandaJob.out
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas    975528 Oct 11 19:55 agis_schedconf.cvmfs.json
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:55 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:40:11] drwx------. 5 boincer umatlas      4096 Oct 11 19:55 pilot3
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas 192514275 Oct 11 21:37 HITS.46676269._058213.pool.root.1
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas       530 Oct 11 21:37 boinc_task_state.xml
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas      1036 Oct 11 21:38 memory_monitor_summary.json
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas    385373 Oct 11 21:38 log.46676269._058213.job.log.tgz.1
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas      7780 Oct 11 21:39 heartbeat.json
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas        95 Oct 11 21:40 pilot_heartbeat.json
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas      7160 Oct 11 21:40 init_data.xml
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:40 boinc_mmap_file
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:40 wrapper_checkpoint.txt
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas      4823 Oct 11 21:40 pilotlog.txt
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas    801117 Oct 11 21:40 log.46676269._058213.job.log.1
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas       357 Oct 11 21:40 output.list
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:40 runtime_log
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas   1208320 Oct 11 21:40 result.tar.gz
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 21:40 runtime_log.err
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas       650 Oct 11 21:40 pqFNDmzSoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfwRMDmrhthVo.diag
[2025-10-11 21:40:11] -rw-r--r--. 1 boincer umatlas     21634 Oct 11 21:40 stderr.txt
[2025-10-11 21:40:11] HITS file was successfully produced:
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas 192514275 Oct 11 21:37 shared/HITS.pool.root.1
[2025-10-11 21:40:11]  *** Contents of shared directory: ***
[2025-10-11 21:40:11] total 402700
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas 218043254 Oct 11 19:54 ATLAS.root_0
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:54 start_atlas.sh
[2025-10-11 21:40:11] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 19:54 input.tar.gz
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas 192514275 Oct 11 21:37 HITS.pool.root.1
[2025-10-11 21:40:11] -rw-------. 1 boincer umatlas   1208320 Oct 11 21:40 result.tar.gz
21:40:12 (352024): run_atlas exited; CPU time 22744.192427
21:40:12 (352024): called boinc_finish(0)

</stderr_txt>
]]>

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