Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
01:04:10 (2331743): wrapper (7.7.26015): starting
01:04:10 (2331743): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 01:04:10] Arguments: --nthreads 12
[2025-10-12 01:04:10] Threads: 12
[2025-10-12 01:04:10] Checking for CVMFS
[2025-10-12 01:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:04:10] 2.11.0.0 3299214 2378 82408 151601 3 188 5257577 6144000 14724 130560 0 46646105 100.000 83385 185 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 01:04:10] CVMFS is ok
[2025-10-12 01:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:04:10] Checking for apptainer binary...
[2025-10-12 01:04:10] apptainer is not installed, using version from CVMFS
[2025-10-12 01:04:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:04:11] radiat0r
[2025-10-12 01:04:11] apptainer works
[2025-10-12 01:04:11] Set ATHENA_PROC_NUMBER=12
[2025-10-12 01:04:11] Set ATHENA_CORE_NUMBER=12
[2025-10-12 01:04:11] Starting ATLAS job with PandaID=6838454020
[2025-10-12 01:04:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:58:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:58:39]  status=None
[2025-10-12 01:58:39]  status_code=0
[2025-10-12 01:58:39]  storage_token=
[2025-10-12 01:58:39]  surl=/var/lib/boinc/slots/9/PanDA_Pilot-6838454020/log.46676269._059345.job.log.tgz.1
[2025-10-12 01:58:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/ba/log.46676269._059345.job.log.tgz.1
[2025-10-12 01:58:39]  workdir=None
[2025-10-12 01:58:39] ]
[2025-10-12 01:58:39] 2025-10-12 01:57:46,152 | INFO     | transferring file log.46676269._059345.job.log.tgz.1 from /var/lib/boinc/slots/9/PanDA_Pilot-6838454020/log.46676269._059345.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 01:58:39] 2025-10-12 01:57:46,152 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-6838454020/log.46676269._059345.job.log.tgz.1 /var/lib/boinc/slots/9/log.46676269._059345.job
[2025-10-12 01:58:39] 2025-10-12 01:57:46,178 | INFO     | adding to output.list: log.46676269._059345.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/ba/log.46676269._059345.job.log.tg
[2025-10-12 01:58:39] 2025-10-12 01:57:46,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 01:58:39] 2025-10-12 01:57:46,179 | INFO     | summary of transferred files:
[2025-10-12 01:58:39] 2025-10-12 01:57:46,179 | INFO     |  -- lfn=log.46676269._059345.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 01:58:39] 2025-10-12 01:57:46,179 | INFO     | stage-out finished correctly
[2025-10-12 01:58:39] 2025-10-12 01:57:47,782 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 01:58:39] 2025-10-12 01:57:47,845 | INFO     | job 6838454020 has state=finished
[2025-10-12 01:58:39] 2025-10-12 01:57:47,846 | INFO     | preparing for final server update for job 6838454020 in state='finished'
[2025-10-12 01:58:39] 2025-10-12 01:57:47,847 | INFO     | this job has now completed (state=finished)
[2025-10-12 01:58:39] 2025-10-12 01:57:47,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 01:58:39] 2025-10-12 01:57:47,847 | INFO     | log transfer has been attempted: DONE
[2025-10-12 01:58:39] 2025-10-12 01:57:47,848 | INFO     | job 6838454020 has finished - writing final server update
[2025-10-12 01:58:39] 2025-10-12 01:57:47,848 | INFO     | total number of processed events: 400 (read)
[2025-10-12 01:58:39] 2025-10-12 01:57:47,851 | INFO     | executing command: lscpu
[2025-10-12 01:58:39] 2025-10-12 01:57:47,994 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:58:39] 2025-10-12 01:57:48,137 | INFO     | PID=2336465 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 01:58:39] 2025-10-12 01:57:48,137 | INFO     | .. there are 17 such processes running
[2025-10-12 01:58:39] 2025-10-12 01:57:49,138 | INFO     | time since job start (3201s) is within the limit (172800.0s)
[2025-10-12 01:58:39] 2025-10-12 01:57:50,858 | WARNING  | process 2344631 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 01:58:39] 2025-10-12 01:57:50,858 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6838454020/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:58:39] 2025-10-12 01:57:51,143 | INFO     | time since job start (3203s) is within the limit (172800.0s)
[2025-10-12 01:58:39] 2025-10-12 01:57:51,412 | INFO     | number of running child processes to parent process 2344631: 1
[2025-10-12 01:58:39] 2025-10-12 01:57:51,412 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:58:39] 2025-10-12 01:57:53,149 | INFO     | time since job start (3205s) is within the limit (172800.0s)
[2025-10-12 01:58:39] 2025-10-12 01:57:53,914 | INFO     | monitor loop #223: job 0:6838454020 is in state 'finished'
[2025-10-12 01:58:39] 2025-10-12 01:57:53,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,133 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:58:39] 2025-10-12 01:57:54,191 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2315.914597656251
[2025-10-12 01:58:39] 2025-10-12 01:57:54,245 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6838454020/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,246 | INFO     | extracted standard info from prmon json
[2025-10-12 01:58:39] 2025-10-12 01:57:54,246 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:58:39] 2025-10-12 01:57:54,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:58:39] 2025-10-12 01:57:54,247 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:58:39] 2025-10-12 01:57:54,247 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | sum of square deviations: 28242390.0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | sum of deviations: 531798731.99999964
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | mean x: 1760232750.0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | mean y: 2652662.511111111
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | -- intersect: -33142188991.289165
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | intersect: -33142188991.289165
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | chi2: 0.0009260687703780585
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | -- intersect: -33142188991.289165
[2025-10-12 01:58:39] 2025-10-12 01:57:54,248 | INFO     | current memory leak: 18.83 B/s (using 45 data points, chi2=0.00)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | could have reported an average CPU frequency of 2351 MHz (5 samples)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | ..............................
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . Timing measurements:
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . get job = 0 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . initial setup = 4 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . payload setup = 8 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . stage-in = 0 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . payload execution = 3165 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . stage-out = 0 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | . log creation = 0 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,249 | INFO     | ..............................
[2025-10-12 01:58:39] 2025-10-12 01:57:54,315 | INFO     | 
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | job summary report
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | --------------------------------------------------
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | PanDA job id: 6838454020
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | task id: 46676269
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | errors: (none)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | pilot state: finished 
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | transexitcode: 0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,316 | INFO     | exeerrorcode: 0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | exeerrordiag: 
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | exitcode: 0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | exitmsg: OK
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | cpuconsumptiontime: 32601 s
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | nevents: 400
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | neventsw: 0
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | pid: 2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | pgrp: 2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | corecount: 12
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | event service: False
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | sizes: {0: 2348743, 1: 2348885, 8: 2349147, 11: 2349175, 3178: 2374742, 3179: 2374741, 3180: 2383923, 3181: 2383979, 3188: 2384205}
[2025-10-12 01:58:39] 2025-10-12 01:57:54,317 | INFO     | --------------------------------------------------
[2025-10-12 01:58:39] 2025-10-12 01:57:54,318 | INFO     | 
[2025-10-12 01:58:39] 2025-10-12 01:57:54,318 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,342 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:58:39] 2025-10-12 01:57:54,343 | INFO     | job 6838454020 has completed (purged errors)
[2025-10-12 01:58:39] 2025-10-12 01:57:54,343 | INFO     | overall cleanup function is called
[2025-10-12 01:58:39] 2025-10-12 01:57:55,350 | INFO     | --- collectZombieJob: --- 10, [2344631]
[2025-10-12 01:58:39] 2025-10-12 01:57:55,351 | INFO     | zombie collector waiting for pid 2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:55,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:58:39] 2025-10-12 01:57:55,351 | INFO     | collected zombie processes
[2025-10-12 01:58:39] 2025-10-12 01:57:55,351 | INFO     | will attempt to kill all subprocesses of pid=2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:56,165 | INFO     | process IDs to be killed: [2344631] (in reverse order)
[2025-10-12 01:58:39] 2025-10-12 01:57:56,437 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:58:39] 2025-10-12 01:57:56,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:58:39] 2025-10-12 01:57:56,466 | INFO     | did not find any defunct processes belonging to 2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:56,492 | INFO     | did not find any defunct processes belonging to 2344631
[2025-10-12 01:58:39] 2025-10-12 01:57:56,493 | INFO     | ready for new job
[2025-10-12 01:58:39] 2025-10-12 01:57:56,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:58:39] 2025-10-12 01:57:56,495 | INFO     | ***************************************
[2025-10-12 01:58:39] 2025-10-12 01:57:56,495 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:58:39] 2025-10-12 01:57:56,495 | INFO     | ***************************************
[2025-10-12 01:58:39] 2025-10-12 01:57:56,495 | INFO     | 
[2025-10-12 01:58:39] 2025-10-12 01:57:56,533 | INFO     | architecture information:
[2025-10-12 01:58:39] 2025-10-12 01:57:56,533 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:58:39] 2025-10-12 01:57:56,555 | INFO     | cat /etc/os-release:
[2025-10-12 01:58:39] NAME="CentOS Linux"
[2025-10-12 01:58:39] VERSION="7 (Core)"
[2025-10-12 01:58:39] ID="centos"
[2025-10-12 01:58:39] ID_LIKE="rhel fedora"
[2025-10-12 01:58:39] VERSION_ID="7"
[2025-10-12 01:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:58:39] ANSI_COLOR="0;31"
[2025-10-12 01:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:58:39] HOME_URL="https://www.centos.org/"
[2025-10-12 01:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:58:39] 
[2025-10-12 01:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:58:39] 
[2025-10-12 01:58:39] 2025-10-12 01:57:56,555 | INFO     | ***************************************
[2025-10-12 01:58:39] 2025-10-12 01:57:57,059 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-12 01:58:39] 2025-10-12 01:57:57,087 | INFO     | sufficient remaining disk space (1725513596928 B)
[2025-10-12 01:58:39] 2025-10-12 01:57:57,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:58:39] 2025-10-12 01:57:57,088 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:58:39] 2025-10-12 01:57:57,088 | INFO     | update_server=False
[2025-10-12 01:58:39] 2025-10-12 01:57:57,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:58:39] 2025-10-12 01:57:57,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:58:39] 2025-10-12 01:57:57,214 | INFO     | all payload control threads have been joined
[2025-10-12 01:58:39] 2025-10-12 01:57:57,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:58:39] 2025-10-12 01:57:57,423 | INFO     | aborting loop
[2025-10-12 01:58:39] 2025-10-12 01:57:57,718 | INFO     | all data control threads have been joined
[2025-10-12 01:58:39] 2025-10-12 01:57:57,729 | INFO     | all job control threads have been joined
[2025-10-12 01:58:39] 2025-10-12 01:57:58,094 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,130 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,218 | INFO     | [payload] control thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:58:39] 2025-10-12 01:57:58,354 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,426 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,723 | INFO     | [data] control thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:58,734 | INFO     | [job] control thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,054 | INFO     | [job] validate thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,071 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,095 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,179 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,278 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,302 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:57:59,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:58:39] 2025-10-12 01:58:00,330 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:58:02,356 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:58:07,979 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:58:39] 2025-10-12 01:58:08,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:58:39] 2025-10-12 01:58:27,208 | INFO     | PID=2336465 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:58:39] 2025-10-12 01:58:27,208 | INFO     | .. there are 17 such processes running
[2025-10-12 01:58:39] 2025-10-12 01:58:27,209 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:58:39] 2025-10-12 01:58:27,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:58:39] 2025-10-12 01:58:27,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:58:39] 2025-10-12 01:58:32,741 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:58:39] 2025-10-12 01:58:34,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615371601728)>', '<ExcThread(monitor, started 140614939174656)>']
[2025-10-12 01:58:39] 2025-10-12 01:58:35,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:58:39] 2025-10-12 01:58:35,243 | INFO     | [monitor] control thread has ended
[2025-10-12 01:58:39] 2025-10-12 01:58:39,442 | INFO     | all workflow threads have been joined
[2025-10-12 01:58:39] 2025-10-12 01:58:39,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:58:39] 2025-10-12 01:58:39,443 | INFO     | traces error code: 0
[2025-10-12 01:58:39] 2025-10-12 01:58:39,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:58:39] 2025-10-12 01:58:39,592 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:58:39] 2025-10-12 01:58:39,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:58:39] 2025-10-12 01:58:39,600 [wrapper] pilotpid: 2336465
[2025-10-12 01:58:39] 2025-10-12 01:58:39,603 [wrapper] Pilot exit status: 0
[2025-10-12 01:58:39] 2025-10-12 01:58:39,615 [wrapper] pandaids: 6838454020
[2025-10-12 01:58:39] 2025-10-12 01:58:39,788 [wrapper] cleanup supervisor_pilot 2744391 2336466
[2025-10-12 01:58:39] 2025-10-12 01:58:39,791 [wrapper] Test setup, not cleaning
[2025-10-12 01:58:39] 2025-10-12 01:58:39,796 [wrapper] apfmon messages muted
[2025-10-12 01:58:39] 2025-10-12 01:58:39,799 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:58:39] 2025-10-12 01:58:39,802 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:58:39]  *** Error codes and diagnostics ***
[2025-10-12 01:58:39]     "exeErrorCode": 0,
[2025-10-12 01:58:39]     "exeErrorDiag": "",
[2025-10-12 01:58:39]     "pilotErrorCode": 0,
[2025-10-12 01:58:39]     "pilotErrorDiag": "",
[2025-10-12 01:58:39]  *** Listing of results directory ***
[2025-10-12 01:58:39] total 412360
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:01 pilot3.tar.gz
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:21 queuedata.json
[2025-10-12 01:58:39] -rwx------ 1 boinc boinc     36292 Oct 11 14:21 runpilot2-wrapper.sh
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc       100 Oct 12 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:58:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 01:04 run_atlas
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc       105 Oct 12 01:04 job.xml
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc 221601567 Oct 12 01:04 EVNT.46676267._002385.pool.root.1
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:04 start_atlas.sh
[2025-10-12 01:58:39] drwxrwx--x 2 boinc boinc      4096 Oct 12 01:04 shared
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc    569679 Oct 12 01:04 input.tar.gz
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc      9395 Oct 12 01:04 init_data.xml
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:04 boinc_setup_complete
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:04 boinc_lockfile
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc      2550 Oct 12 01:04 pandaJob.out
[2025-10-12 01:58:39] -rw------- 1 boinc boinc    975496 Oct 12 01:04 agis_schedconf.cvmfs.json
[2025-10-12 01:58:39] -rw------- 1 boinc boinc   1560580 Oct 12 01:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:58:39] drwx------ 5 boinc boinc      4096 Oct 12 01:04 pilot3
[2025-10-12 01:58:39] -rw------- 1 boinc boinc 195041797 Oct 12 01:57 HITS.46676269._059345.pool.root.1
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc       530 Oct 12 01:57 boinc_task_state.xml
[2025-10-12 01:58:39] -rw------- 1 boinc boinc      1035 Oct 12 01:57 memory_monitor_summary.json
[2025-10-12 01:58:39] -rw------- 1 boinc boinc    377666 Oct 12 01:57 log.46676269._059345.job.log.tgz.1
[2025-10-12 01:58:39] -rw------- 1 boinc boinc      7739 Oct 12 01:57 heartbeat.json
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc        27 Oct 12 01:58 wrapper_checkpoint.txt
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc      8192 Oct 12 01:58 boinc_mmap_file
[2025-10-12 01:58:39] -rw------- 1 boinc boinc        95 Oct 12 01:58 pilot_heartbeat.json
[2025-10-12 01:58:39] -rw------- 1 boinc boinc      4898 Oct 12 01:58 pilotlog.txt
[2025-10-12 01:58:39] -rw------- 1 boinc boinc    473559 Oct 12 01:58 log.46676269._059345.job.log.1
[2025-10-12 01:58:39] -rw------- 1 boinc boinc       357 Oct 12 01:58 output.list
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc       620 Oct 12 01:58 runtime_log
[2025-10-12 01:58:39] -rw------- 1 boinc boinc    870400 Oct 12 01:58 result.tar.gz
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc      8658 Oct 12 01:58 runtime_log.err
[2025-10-12 01:58:39] -rw------- 1 boinc boinc       643 Oct 12 01:58 3hELDm5epR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXfgNDmswJ7Do.diag
[2025-10-12 01:58:39] -rw-r--r-- 1 boinc boinc     21815 Oct 12 01:58 stderr.txt
[2025-10-12 01:58:39] HITS file was successfully produced:
[2025-10-12 01:58:39] -rw------- 1 boinc boinc 195041797 Oct 12 01:57 shared/HITS.pool.root.1
[2025-10-12 01:58:39]  *** Contents of shared directory: ***
[2025-10-12 01:58:39] total 408316
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc 221601567 Oct 12 01:04 ATLAS.root_0
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:04 start_atlas.sh
[2025-10-12 01:58:39] -rw-r--r-- 2 boinc boinc    569679 Oct 12 01:04 input.tar.gz
[2025-10-12 01:58:39] -rw------- 1 boinc boinc 195041797 Oct 12 01:57 HITS.pool.root.1
[2025-10-12 01:58:39] -rw------- 1 boinc boinc    870400 Oct 12 01:58 result.tar.gz
01:58:41 (2331743): run_atlas exited; CPU time 32815.477526
01:58:41 (2331743): called boinc_finish(0)

</stderr_txt>
]]>

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