Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:10:02 (2745439): wrapper (7.7.26015): starting
11:10:02 (2745439): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 11:10:02] Arguments: --nthreads 3
[2025-10-12 11:10:02] Threads: 3
[2025-10-12 11:10:02] Checking for CVMFS
[2025-10-12 11:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:10:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:10:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:10:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:10:02] 2.9.2.0 1545274 4123 84388 151613 2 57 31231870 36864001 0 130560 0 3153441 99.991 137503 882 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 11:10:02] CVMFS is ok
[2025-10-12 11:10:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:10:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:10:02] Further information can be found at the LHC@home message board.
[2025-10-12 11:10:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:10:02] Checking for apptainer binary...
[2025-10-12 11:10:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:10:02] Running /usr/bin/apptainer --version
[2025-10-12 11:10:02] apptainer version 1.4.1-1.1
[2025-10-12 11:10:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:10:02] atlasA223
[2025-10-12 11:10:02] apptainer works
[2025-10-12 11:10:02] Set ATHENA_PROC_NUMBER=3
[2025-10-12 11:10:02] Set ATHENA_CORE_NUMBER=3
[2025-10-12 11:10:02] Starting ATLAS job with PandaID=6838632431
[2025-10-12 11:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:34:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:34:38] 2025-10-12 10:34:07,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:34:38] 2025-10-12 10:34:07,103 | INFO     | did not find any defunct processes belonging to 2755593
[2025-10-12 12:34:38] 2025-10-12 10:34:07,104 | INFO     | did not find any defunct processes belonging to 2755593
[2025-10-12 12:34:38] 2025-10-12 10:34:07,104 | INFO     | ready for new job
[2025-10-12 12:34:38] 2025-10-12 10:34:07,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:34:38] 2025-10-12 10:34:07,105 | INFO     | ***************************************
[2025-10-12 12:34:38] 2025-10-12 10:34:07,105 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:34:38] 2025-10-12 10:34:07,105 | INFO     | ***************************************
[2025-10-12 12:34:38] 2025-10-12 10:34:07,105 | INFO     | 
[2025-10-12 12:34:38] 2025-10-12 10:34:07,105 | INFO     | architecture information:
[2025-10-12 12:34:38] 2025-10-12 10:34:07,106 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:34:38] 2025-10-12 10:34:07,115 | INFO     | cat /etc/os-release:
[2025-10-12 12:34:38] NAME="CentOS Linux"
[2025-10-12 12:34:38] VERSION="7 (Core)"
[2025-10-12 12:34:38] ID="centos"
[2025-10-12 12:34:38] ID_LIKE="rhel fedora"
[2025-10-12 12:34:38] VERSION_ID="7"
[2025-10-12 12:34:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:34:38] ANSI_COLOR="0;31"
[2025-10-12 12:34:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:34:38] HOME_URL="https://www.centos.org/"
[2025-10-12 12:34:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:34:38] 
[2025-10-12 12:34:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:34:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:34:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:34:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:34:38] 
[2025-10-12 12:34:38] 2025-10-12 10:34:07,115 | INFO     | ***************************************
[2025-10-12 12:34:38] 2025-10-12 10:34:07,618 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 12:34:38] 2025-10-12 10:34:07,633 | INFO     | sufficient remaining disk space (373599240192 B)
[2025-10-12 12:34:38] 2025-10-12 10:34:07,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:34:38] 2025-10-12 10:34:07,634 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:34:38] 2025-10-12 10:34:07,634 | INFO     | update_server=False
[2025-10-12 12:34:38] 2025-10-12 10:34:07,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:34:38] 2025-10-12 10:34:07,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:34:38] 2025-10-12 10:34:07,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:34:38] 2025-10-12 10:34:07,780 | INFO     | aborting loop
[2025-10-12 12:34:38] 2025-10-12 10:34:07,942 | INFO     | all data control threads have been joined
[2025-10-12 12:34:38] 2025-10-12 10:34:08,327 | INFO     | all payload control threads have been joined
[2025-10-12 12:34:38] 2025-10-12 10:34:08,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:34:38] 2025-10-12 10:34:08,639 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:08,640 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:08,786 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:08,855 | INFO     | all job control threads have been joined
[2025-10-12 12:34:38] 2025-10-12 10:34:08,947 | INFO     | [data] control thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,312 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,333 | INFO     | [payload] control thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,343 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,506 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,631 | INFO     | [job] validate thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,773 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,808 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:09,861 | INFO     | [job] control thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:10,084 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:10,642 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:11,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:34:38] 2025-10-12 10:34:13,995 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:34:38] 2025-10-12 10:34:15,135 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:34:38] 2025-10-12 10:34:16,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467545012032)>', '<ExcThread(monitor, started 140466804733696)>']
[2025-10-12 12:34:38] 2025-10-12 10:34:21,904 | INFO     | all workflow threads have been joined
[2025-10-12 12:34:38] 2025-10-12 10:34:21,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:34:38] 2025-10-12 10:34:21,904 | INFO     | traces error code: 0
[2025-10-12 12:34:38] 2025-10-12 10:34:21,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | INFO     | PID=2749155 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:34:38] 2025-10-12 10:34:38,075 | INFO     | [monitor] control thread has ended
[2025-10-12 12:34:38] 2025-10-12 10:34:38,122 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:34:38] 2025-10-12 10:34:38,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:34:38] 2025-10-12 10:34:38,127 [wrapper] pilotpid: 2749155
[2025-10-12 12:34:38] 2025-10-12 10:34:38,130 [wrapper] Pilot exit status: 0
[2025-10-12 12:34:38] 2025-10-12 10:34:38,138 [wrapper] pandaids: 6838632431
[2025-10-12 12:34:38] 2025-10-12 10:34:38,155 [wrapper] cleanup supervisor_pilot 2767752 2749156
[2025-10-12 12:34:38] 2025-10-12 10:34:38,157 [wrapper] Test setup, not cleaning
[2025-10-12 12:34:38] 2025-10-12 10:34:38,160 [wrapper] apfmon messages muted
[2025-10-12 12:34:38] 2025-10-12 10:34:38,162 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:34:38] 2025-10-12 10:34:38,165 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:34:38]  *** Error codes and diagnostics ***
[2025-10-12 12:34:38]     "exeErrorCode": 0,
[2025-10-12 12:34:38]     "exeErrorDiag": "",
[2025-10-12 12:34:38]     "pilotErrorCode": 0,
[2025-10-12 12:34:38]     "pilotErrorDiag": "",
[2025-10-12 12:34:38]  *** Listing of results directory ***
[2025-10-12 12:34:38] total 412072
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:24 queuedata.json
[2025-10-12 12:34:38] -rwx------ 1 boinc boinc     36292 Oct 11 18:25 runpilot2-wrapper.sh
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:34:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:10 run_atlas
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:10 job.xml
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc 220950626 Oct 12 11:10 EVNT.46676267._002447.pool.root.1
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:10 input.tar.gz
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:10 start_atlas.sh
[2025-10-12 12:34:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:10 shared
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:10 boinc_setup_complete
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      6448 Oct 12 11:10 init_data.xml
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:10 boinc_lockfile
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:10 pandaJob.out
[2025-10-12 12:34:38] -rw------- 1 boinc boinc    975520 Oct 12 11:10 agis_schedconf.cvmfs.json
[2025-10-12 12:34:38] -rw------- 1 boinc boinc   1560580 Oct 12 11:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:34:38] drwx------ 5 boinc boinc      4096 Oct 12 11:10 pilot3
[2025-10-12 12:34:38] -rw------- 1 boinc boinc 195109994 Oct 12 12:33 HITS.46676269._060941.pool.root.1
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc       530 Oct 12 12:33 boinc_task_state.xml
[2025-10-12 12:34:38] -rw------- 1 boinc boinc      1029 Oct 12 12:33 memory_monitor_summary.json
[2025-10-12 12:34:38] -rw------- 1 boinc boinc    262666 Oct 12 12:33 log.46676269._060941.job.log.tgz.1
[2025-10-12 12:34:38] -rw------- 1 boinc boinc      7755 Oct 12 12:34 heartbeat.json
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:34 boinc_mmap_file
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:34 wrapper_checkpoint.txt
[2025-10-12 12:34:38] -rw------- 1 boinc boinc       747 Oct 12 12:34 pilotlog.txt
[2025-10-12 12:34:38] -rw------- 1 boinc boinc        95 Oct 12 12:34 pilot_heartbeat.json
[2025-10-12 12:34:38] -rw------- 1 boinc boinc    737713 Oct 12 12:34 log.46676269._060941.job.log.1
[2025-10-12 12:34:38] -rw------- 1 boinc boinc       357 Oct 12 12:34 output.list
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:34 runtime_log
[2025-10-12 12:34:38] -rw------- 1 boinc boinc   1024000 Oct 12 12:34 result.tar.gz
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      8792 Oct 12 12:34 runtime_log.err
[2025-10-12 12:34:38] -rw------- 1 boinc boinc       661 Oct 12 12:34 FxkMDmNarR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUwgNDm1GvPRn.diag
[2025-10-12 12:34:38] -rw-r--r-- 1 boinc boinc      9864 Oct 12 12:34 stderr.txt
[2025-10-12 12:34:38] HITS file was successfully produced:
[2025-10-12 12:34:38] -rw------- 1 boinc boinc 195109994 Oct 12 12:33 shared/HITS.pool.root.1
[2025-10-12 12:34:38]  *** Contents of shared directory: ***
[2025-10-12 12:34:38] total 407900
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc 220950626 Oct 12 11:10 ATLAS.root_0
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:10 input.tar.gz
[2025-10-12 12:34:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:10 start_atlas.sh
[2025-10-12 12:34:38] -rw------- 1 boinc boinc 195109994 Oct 12 12:33 HITS.pool.root.1
[2025-10-12 12:34:38] -rw------- 1 boinc boinc   1024000 Oct 12 12:34 result.tar.gz
12:34:39 (2745439): run_atlas exited; CPU time 14461.455398
12:34:39 (2745439): called boinc_finish(0)

</stderr_txt>
]]>

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