Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:07:12 (545655): wrapper (7.7.26015): starting
17:07:12 (545655): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:07:12] Arguments: --nthreads 12
[2025-10-11 17:07:12] Threads: 12
[2025-10-11 17:07:12] Checking for CVMFS
[2025-10-11 17:07:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:07:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:07:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:07:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:07:13] 2.11.5.0 2859 30714 209100 151600 3 651 43569325 45568000 21036 130560 0 334366236 99.877 131593503 26183 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 17:07:13] CVMFS is ok
[2025-10-11 17:07:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:07:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:07:13] Further information can be found at the LHC@home message board.
[2025-10-11 17:07:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:07:13] Checking for apptainer binary...
[2025-10-11 17:07:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:07:13] Running /usr/bin/apptainer --version
[2025-10-11 17:07:13] apptainer version 1.4.1-1.el9
[2025-10-11 17:07:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:07:14] wns0069.triumf.lcg
[2025-10-11 17:07:14] apptainer works
[2025-10-11 17:07:14] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:07:14] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:07:14] Starting ATLAS job with PandaID=6838988990
[2025-10-11 17:07:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:13:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | WARNING  | wrong length of table data, x=[1760227760.0], y=[909.0] (must be same and length>=4)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | could have reported an average CPU frequency of 2579 MHz (4 samples)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . Timing measurements:
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . get job = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . initial setup = 3 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload setup = 28 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-in = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload execution = 64 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-out = 1 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . log creation = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:13:03] 2025-10-12 00:12:30,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988990/pilotlog.txt
[2025-10-11 17:13:03] 2025-10-12 00:12:30,367 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 17:13:03] - Log from pilotlog.txt -
[2025-10-11 17:13:03] 2025-10-12 00:12:30,335 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838988990/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | INFO     | extracted standard info from prmon json
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | WARNING  | wrong length of table data, x=[1760227760.0], y=[909.0] (must be same and length>=4)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | could have reported an average CPU frequency of 2579 MHz (4 samples)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . Timing measurements:
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . get job = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . initial setup = 3 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload setup = 28 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-in = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload execution = 64 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-out = 1 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . log creation = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:13:03] 2025-10-12 00:12:30,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988990/pilotlog.txt
[2025-10-11 17:13:03] 2025-10-12 00:12:30,368 | WARNING  | 
[2025-10-11 17:13:03] [begin log extracts]
[2025-10-11 17:13:03] - Log from pilotlog.txt -
[2025-10-11 17:13:03] 2025-10-12 00:12:30,335 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838988990/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | INFO     | extracted standard info from prmon json
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:13:03] 2025-10-12 00:12:30,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | WARNING  | wrong length of table data, x=[1760227760.0], y=[909.0] (must be same and length>=4)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | could have reported an average CPU frequency of 2579 MHz (4 samples)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . Timing measurements:
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . get job = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . initial setup = 3 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload setup = 28 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-in = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . payload execution = 64 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . stage-out = 1 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | . log creation = 0 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | ..............................
[2025-10-11 17:13:03] 2025-10-12 00:12:30,337 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:13:03] 2025-10-12 00:12:30,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988990/pilotlog.txt
[2025-10-11 17:13:03] [end log extracts]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,368 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,368 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 17:13:03] 2025-10-12 00:12:30,485 | INFO     | 
[2025-10-11 17:13:03] 2025-10-12 00:12:30,485 | INFO     | job summary report
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | --------------------------------------------------
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | PanDA job id: 6838988990
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | task id: 46676269
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 17:09:58,491 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | pilot state: failed 
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | transexitcode: 65
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | exeerrorcode: 65
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | exitcode: 65
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | nevents: 0
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | neventsw: 0
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | pid: 556351
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | pgrp: 556351
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | corecount: 12
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | event service: False
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | sizes: {0: 2348682, 1: 2348881, 12: 2348881, 18: 2349171, 22: 2349199, 97: 2372456, 98: 2372560, 100: 2376880, 104: 2376908, 241: 2377074}
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | --------------------------------------------------
[2025-10-11 17:13:03] 2025-10-12 00:12:30,486 | INFO     | 
[2025-10-11 17:13:03] 2025-10-12 00:12:30,487 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 17:13:03] 2025-10-12 00:12:30,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:13:03] 2025-10-12 00:12:30,544 | INFO     | job 6838988990 has completed (purged errors)
[2025-10-11 17:13:03] 2025-10-12 00:12:30,544 | INFO     | overall cleanup function is called
[2025-10-11 17:13:03] 2025-10-12 00:12:31,554 | INFO     | --- collectZombieJob: --- 10, [556351]
[2025-10-11 17:13:03] 2025-10-12 00:12:31,555 | INFO     | zombie collector waiting for pid 556351
[2025-10-11 17:13:03] 2025-10-12 00:12:31,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:13:03] 2025-10-12 00:12:31,555 | INFO     | collected zombie processes
[2025-10-11 17:13:03] 2025-10-12 00:12:31,555 | INFO     | will attempt to kill all subprocesses of pid=556351
[2025-10-11 17:13:03] 2025-10-12 00:12:32,133 | INFO     | process IDs to be killed: [556351] (in reverse order)
[2025-10-11 17:13:03] 2025-10-12 00:12:32,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:13:03] 2025-10-12 00:12:32,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:13:03] 2025-10-12 00:12:32,284 | INFO     | did not find any defunct processes belonging to 556351
[2025-10-11 17:13:03] 2025-10-12 00:12:32,304 | INFO     | did not find any defunct processes belonging to 556351
[2025-10-11 17:13:03] 2025-10-12 00:12:32,304 | INFO     | ready for new job
[2025-10-11 17:13:03] 2025-10-12 00:12:32,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:13:03] 2025-10-12 00:12:32,305 | INFO     | ***************************************
[2025-10-11 17:13:03] 2025-10-12 00:12:32,306 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:13:03] 2025-10-12 00:12:32,306 | INFO     | ***************************************
[2025-10-11 17:13:03] 2025-10-12 00:12:32,306 | INFO     | 
[2025-10-11 17:13:03] 2025-10-12 00:12:32,308 | INFO     | architecture information:
[2025-10-11 17:13:03] 2025-10-12 00:12:32,310 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:13:03] 2025-10-12 00:12:32,383 | INFO     | cat /etc/os-release:
[2025-10-11 17:13:03] NAME="CentOS Linux"
[2025-10-11 17:13:03] VERSION="7 (Core)"
[2025-10-11 17:13:03] ID="centos"
[2025-10-11 17:13:03] ID_LIKE="rhel fedora"
[2025-10-11 17:13:03] VERSION_ID="7"
[2025-10-11 17:13:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:13:03] ANSI_COLOR="0;31"
[2025-10-11 17:13:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:13:03] HOME_URL="https://www.centos.org/"
[2025-10-11 17:13:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:13:03] 
[2025-10-11 17:13:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:13:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:13:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:13:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:13:03] 
[2025-10-11 17:13:03] 2025-10-12 00:12:32,384 | INFO     | ***************************************
[2025-10-11 17:13:03] 2025-10-12 00:12:32,888 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 17:13:03] 2025-10-12 00:12:32,917 | INFO     | sufficient remaining disk space (1094836027392 B)
[2025-10-11 17:13:03] 2025-10-12 00:12:32,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:13:03] 2025-10-12 00:12:32,917 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:13:03] 2025-10-12 00:12:32,917 | INFO     | update_server=False
[2025-10-11 17:13:03] 2025-10-12 00:12:32,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:13:03] 2025-10-12 00:12:32,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:13:03] 2025-10-12 00:12:33,020 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:13:03] 2025-10-12 00:12:33,021 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:13:03] 2025-10-12 00:12:33,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:13:03] 2025-10-12 00:12:33,021 | INFO     | will abort loop
[2025-10-11 17:13:03] 2025-10-12 00:12:33,075 | INFO     | all data control threads have been joined
[2025-10-11 17:13:03] 2025-10-12 00:12:33,640 | INFO     | all job control threads have been joined
[2025-10-11 17:13:03] 2025-10-12 00:12:33,923 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,026 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,081 | INFO     | [data] control thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,088 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,095 | INFO     | all payload control threads have been joined
[2025-10-11 17:13:03] 2025-10-12 00:12:34,103 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,121 | INFO     | [job] validate thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,162 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:13:03] 2025-10-12 00:12:34,646 | INFO     | [job] control thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,925 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:34,932 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:35,100 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:35,101 | INFO     | [payload] control thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:35,188 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:35,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:13:03] 2025-10-12 00:12:36,508 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:38,200 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:13:03] 2025-10-12 00:12:45,990 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:13:03] 2025-10-12 00:12:46,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889253005120)>', '<ExcThread(monitor, started 139888468936448)>']
[2025-10-11 17:13:03] 2025-10-12 00:12:51,550 | INFO     | all workflow threads have been joined
[2025-10-11 17:13:03] 2025-10-12 00:12:51,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:13:03] 2025-10-12 00:12:51,551 | INFO     | traces error code: 0
[2025-10-11 17:13:03] 2025-10-12 00:12:51,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:13:03] 2025-10-12 00:13:02,625 | INFO     | PID=549393 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | INFO     | .. there are 35 such processes running
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:13:03] 2025-10-12 00:13:02,626 | INFO     | [monitor] control thread has ended
[2025-10-11 17:13:03] 2025-10-12 00:13:02,800 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:13:03] 2025-10-12 00:13:02,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:13:03] 2025-10-12 00:13:02,803 [wrapper] pilotpid: 549393
[2025-10-11 17:13:03] 2025-10-12 00:13:02,828 [wrapper] Pilot exit status: 0
[2025-10-11 17:13:03] 2025-10-12 00:13:02,912 [wrapper] pandaids: 6838988990
[2025-10-11 17:13:03] 2025-10-12 00:13:03,097 [wrapper] cleanup supervisor_pilot  549399 549394
[2025-10-11 17:13:03] 2025-10-12 00:13:03,100 [wrapper] Test setup, not cleaning
[2025-10-11 17:13:03] 2025-10-12 00:13:03,103 [wrapper] apfmon messages muted
[2025-10-11 17:13:03] 2025-10-12 00:13:03,105 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:13:03] 2025-10-12 00:13:03,108 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:13:03]  *** Error codes and diagnostics ***
[2025-10-11 17:13:03]     "exeErrorCode": 65,
[2025-10-11 17:13:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:13:03]     "pilotErrorCode": 1305,
[2025-10-11 17:13:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:13:03]  *** Listing of results directory ***
[2025-10-11 17:13:03] total 221584
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc    557409 Oct 11 14:13 pilot3.tar.gz
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc      5112 Oct 11 14:22 queuedata.json
[2025-10-11 17:13:03] -rwx------. 1 boinc boinc     36292 Oct 11 14:23 runpilot2-wrapper.sh
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc       100 Oct 11 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:13:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 17:07 run_atlas
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc       105 Oct 11 17:07 job.xml
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc 222766560 Oct 11 17:07 EVNT.46676267._002622.pool.root.1
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc      6594 Oct 11 17:07 init_data.xml
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:07 start_atlas.sh
[2025-10-11 17:13:03] drwxrwx--x. 2 boinc boinc      4096 Oct 11 17:07 shared
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc    569678 Oct 11 17:07 input.tar.gz
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc         0 Oct 11 17:07 boinc_lockfile
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc      2549 Oct 11 17:07 pandaJob.out
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc    975528 Oct 11 17:07 agis_schedconf.cvmfs.json
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc   1560580 Oct 11 17:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:13:03] drwx------. 5 boinc boinc      4096 Oct 11 17:07 pilot3
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc       524 Oct 11 17:09 boinc_task_state.xml
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc       943 Oct 11 17:10 memory_monitor_summary.json
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc     22425 Oct 11 17:10 log.46676269._065305.job.log.tgz.1
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc      8405 Oct 11 17:12 heartbeat.json
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc        22 Oct 11 17:12 wrapper_checkpoint.txt
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc        95 Oct 11 17:13 pilot_heartbeat.json
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc       822 Oct 11 17:13 pilotlog.txt
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc      8192 Oct 11 17:13 boinc_mmap_file
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc     95976 Oct 11 17:13 log.46676269._065305.job.log.1
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc       188 Oct 11 17:13 output.list
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc       620 Oct 11 17:13 runtime_log
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc    133120 Oct 11 17:13 result.tar.gz
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc      8528 Oct 11 17:13 runtime_log.err
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc       644 Oct 11 17:13 gsVNDmAFwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXdSMDmZWbPXn.diag
[2025-10-11 17:13:03] -rw-r--r--. 1 boinc boinc     21833 Oct 11 17:13 stderr.txt
[2025-10-11 17:13:03] No HITS result produced
[2025-10-11 17:13:03]  *** Contents of shared directory: ***
[2025-10-11 17:13:03] total 218260
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc 222766560 Oct 11 17:07 ATLAS.root_0
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:07 start_atlas.sh
[2025-10-11 17:13:03] -rw-r--r--. 2 boinc boinc    569678 Oct 11 17:07 input.tar.gz
[2025-10-11 17:13:03] -rw-------. 1 boinc boinc    133120 Oct 11 17:13 result.tar.gz
17:13:04 (545655): run_atlas exited; CPU time 29.456288
17:13:04 (545655): called boinc_finish(0)

</stderr_txt>
]]>

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