Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:05:27 (3771395): wrapper (7.7.26015): starting
17:05:27 (3771395): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:05:27] Arguments: --nthreads 12
[2025-10-11 17:05:27] Threads: 12
[2025-10-11 17:05:27] Checking for CVMFS
[2025-10-11 17:05:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:05:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:05:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:05:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:05:28] 2.11.5.0 2057 30718 217328 151600 1 504 34598879 45568000 20112 130560 0 262863264 99.847 130307023 27340 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-11 17:05:28] CVMFS is ok
[2025-10-11 17:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:05:28] Further information can be found at the LHC@home message board.
[2025-10-11 17:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:05:28] Checking for apptainer binary...
[2025-10-11 17:05:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:05:28] Running /usr/bin/apptainer --version
[2025-10-11 17:05:28] apptainer version 1.4.1-1.el9
[2025-10-11 17:05:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:05:29] wns0060.triumf.lcg
[2025-10-11 17:05:29] apptainer works
[2025-10-11 17:05:29] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:05:29] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:05:29] Starting ATLAS job with PandaID=6838988980
[2025-10-11 17:05:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:10:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | could have reported an average CPU frequency of 2686 MHz (4 samples)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . Timing measurements:
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . get job = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . initial setup = 3 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload setup = 15 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-in = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload execution = 42 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-out = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . log creation = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988980/pilotlog.txt
[2025-10-11 17:10:13] 2025-10-12 00:09:37,595 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 17:10:13] - Log from pilotlog.txt -
[2025-10-11 17:10:13] 2025-10-12 00:09:37,493 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838988980/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | INFO     | extracted standard info from prmon json
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | wrong length of table data, x=[1760227599.0], y=[1921.0] (must be same and length>=4)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | could have reported an average CPU frequency of 2686 MHz (4 samples)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . Timing measurements:
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . get job = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . initial setup = 3 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload setup = 15 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-in = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload execution = 42 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-out = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . log creation = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988980/pilotlog.txt
[2025-10-11 17:10:13] 2025-10-12 00:09:37,595 | WARNING  | 
[2025-10-11 17:10:13] [begin log extracts]
[2025-10-11 17:10:13] - Log from pilotlog.txt -
[2025-10-11 17:10:13] 2025-10-12 00:09:37,493 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838988980/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | INFO     | extracted standard info from prmon json
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:10:13] 2025-10-12 00:09:37,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:10:13] 2025-10-12 00:09:37,521 | WARNING  | wrong length of table data, x=[1760227599.0], y=[1921.0] (must be same and length>=4)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | could have reported an average CPU frequency of 2686 MHz (4 samples)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . Timing measurements:
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . get job = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . initial setup = 3 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload setup = 15 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-in = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . payload execution = 42 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . stage-out = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,522 | INFO     | . log creation = 0 s
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | ..............................
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 17:10:13] 2025-10-12 00:09:37,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838988980/pilotlog.txt
[2025-10-11 17:10:13] [end log extracts]
[2025-10-11 17:10:13] 2025-10-12 00:09:37,595 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 17:10:13] 2025-10-12 00:09:37,600 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 17:10:13] 2025-10-12 00:09:38,089 | INFO     | 
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | job summary report
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | --------------------------------------------------
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | PanDA job id: 6838988980
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | task id: 46676269
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 17:07:07,046 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | pilot state: failed 
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | transexitcode: 65
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | exeerrorcode: 65
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | exitcode: 65
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | nevents: 0
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | neventsw: 0
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | pid: 3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | pgrp: 3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:38,090 | INFO     | corecount: 12
[2025-10-11 17:10:13] 2025-10-12 00:09:38,091 | INFO     | event service: False
[2025-10-11 17:10:13] 2025-10-12 00:09:38,091 | INFO     | sizes: {0: 2348854, 11: 2349144, 62: 2372378, 63: 2376698, 205: 2376836}
[2025-10-11 17:10:13] 2025-10-12 00:09:38,091 | INFO     | --------------------------------------------------
[2025-10-11 17:10:13] 2025-10-12 00:09:38,091 | INFO     | 
[2025-10-11 17:10:13] 2025-10-12 00:09:38,091 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | job 6838988980 has completed (purged errors)
[2025-10-11 17:10:13] 2025-10-12 00:09:38,219 | INFO     | overall cleanup function is called
[2025-10-11 17:10:13] 2025-10-12 00:09:39,225 | INFO     | --- collectZombieJob: --- 10, [3789080]
[2025-10-11 17:10:13] 2025-10-12 00:09:39,226 | INFO     | zombie collector waiting for pid 3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:39,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:10:13] 2025-10-12 00:09:39,226 | INFO     | collected zombie processes
[2025-10-11 17:10:13] 2025-10-12 00:09:39,226 | INFO     | will attempt to kill all subprocesses of pid=3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:40,433 | INFO     | PID=3777053 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:10:13] 2025-10-12 00:09:40,433 | INFO     | .. there are 42 such processes running
[2025-10-11 17:10:13] 2025-10-12 00:09:40,602 | INFO     | process IDs to be killed: [3789080] (in reverse order)
[2025-10-11 17:10:13] 2025-10-12 00:09:40,965 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:10:13] 2025-10-12 00:09:40,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:10:13] 2025-10-12 00:09:40,986 | INFO     | did not find any defunct processes belonging to 3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:41,018 | INFO     | did not find any defunct processes belonging to 3789080
[2025-10-11 17:10:13] 2025-10-12 00:09:41,018 | INFO     | ready for new job
[2025-10-11 17:10:13] 2025-10-12 00:09:41,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:10:13] 2025-10-12 00:09:41,040 | INFO     | ***************************************
[2025-10-11 17:10:13] 2025-10-12 00:09:41,040 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:10:13] 2025-10-12 00:09:41,040 | INFO     | ***************************************
[2025-10-11 17:10:13] 2025-10-12 00:09:41,040 | INFO     | 
[2025-10-11 17:10:13] 2025-10-12 00:09:41,042 | INFO     | architecture information:
[2025-10-11 17:10:13] 2025-10-12 00:09:41,065 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:10:13] 2025-10-12 00:09:41,132 | INFO     | cat /etc/os-release:
[2025-10-11 17:10:13] NAME="CentOS Linux"
[2025-10-11 17:10:13] VERSION="7 (Core)"
[2025-10-11 17:10:13] ID="centos"
[2025-10-11 17:10:13] ID_LIKE="rhel fedora"
[2025-10-11 17:10:13] VERSION_ID="7"
[2025-10-11 17:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:10:13] ANSI_COLOR="0;31"
[2025-10-11 17:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:10:13] HOME_URL="https://www.centos.org/"
[2025-10-11 17:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:10:13] 
[2025-10-11 17:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:10:13] 
[2025-10-11 17:10:13] 2025-10-12 00:09:41,132 | INFO     | ***************************************
[2025-10-11 17:10:13] 2025-10-12 00:09:41,640 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 17:10:13] 2025-10-12 00:09:41,680 | INFO     | sufficient remaining disk space (1859509026816 B)
[2025-10-11 17:10:13] 2025-10-12 00:09:41,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:10:13] 2025-10-12 00:09:41,680 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:10:13] 2025-10-12 00:09:41,680 | INFO     | update_server=False
[2025-10-11 17:10:13] 2025-10-12 00:09:41,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:10:13] 2025-10-12 00:09:41,711 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:10:13] 2025-10-12 00:09:41,712 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:10:13] 2025-10-12 00:09:41,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:10:13] 2025-10-12 00:09:41,712 | INFO     | will abort loop
[2025-10-11 17:10:13] 2025-10-12 00:09:41,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:10:13] 2025-10-12 00:09:41,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:10:13] 2025-10-12 00:09:41,883 | INFO     | all job control threads have been joined
[2025-10-11 17:10:13] 2025-10-12 00:09:42,328 | INFO     | all payload control threads have been joined
[2025-10-11 17:10:13] 2025-10-12 00:09:42,688 | INFO     | all data control threads have been joined
[2025-10-11 17:10:13] 2025-10-12 00:09:42,690 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:42,718 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:42,889 | INFO     | [job] control thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:42,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:10:13] 2025-10-12 00:09:43,334 | INFO     | [payload] control thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,374 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,553 | INFO     | [job] validate thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,604 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,693 | INFO     | [data] control thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,742 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,806 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,865 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,865 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,933 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:43,949 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:44,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:45,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:10:13] 2025-10-12 00:09:51,648 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:10:13] 2025-10-12 00:09:53,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727855232832)>', '<ExcThread(monitor, started 139727466379008)>']
[2025-10-11 17:10:13] 2025-10-12 00:09:58,684 | INFO     | all workflow threads have been joined
[2025-10-11 17:10:13] 2025-10-12 00:09:58,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:10:13] 2025-10-12 00:09:58,685 | INFO     | traces error code: 0
[2025-10-11 17:10:13] 2025-10-12 00:09:58,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:10:13] 2025-10-12 00:10:12,818 | INFO     | PID=3777053 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:10:13] 2025-10-12 00:10:12,818 | INFO     | .. there are 42 such processes running
[2025-10-11 17:10:13] 2025-10-12 00:10:12,819 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:10:13] 2025-10-12 00:10:12,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:10:13] 2025-10-12 00:10:12,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:10:13] 2025-10-12 00:10:12,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:10:13] 2025-10-12 00:10:12,820 | INFO     | [monitor] control thread has ended
[2025-10-11 17:10:13] 2025-10-12 00:10:12,921 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:10:13] 2025-10-12 00:10:12,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:10:13] 2025-10-12 00:10:12,924 [wrapper] pilotpid: 3777053
[2025-10-11 17:10:13] 2025-10-12 00:10:12,926 [wrapper] Pilot exit status: 0
[2025-10-11 17:10:13] 2025-10-12 00:10:12,936 [wrapper] pandaids: 6838988980
[2025-10-11 17:10:13] 2025-10-12 00:10:12,990 [wrapper] cleanup supervisor_pilot 3777068 3777054
[2025-10-11 17:10:13] 2025-10-12 00:10:12,992 [wrapper] Test setup, not cleaning
[2025-10-11 17:10:13] 2025-10-12 00:10:12,994 [wrapper] apfmon messages muted
[2025-10-11 17:10:13] 2025-10-12 00:10:12,996 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:10:13] 2025-10-12 00:10:12,997 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:10:13]  *** Error codes and diagnostics ***
[2025-10-11 17:10:13]     "exeErrorCode": 65,
[2025-10-11 17:10:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:10:13]     "pilotErrorCode": 1305,
[2025-10-11 17:10:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 17:10:13]  *** Listing of results directory ***
[2025-10-11 17:10:13] total 221580
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc    557409 Oct 11 14:13 pilot3.tar.gz
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc      5112 Oct 11 14:22 queuedata.json
[2025-10-11 17:10:13] -rwx------. 1 boinc boinc     36292 Oct 11 14:23 runpilot2-wrapper.sh
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc       100 Oct 11 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:10:13] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 17:05 run_atlas
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc       105 Oct 11 17:05 job.xml
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc      6594 Oct 11 17:05 init_data.xml
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc 222766560 Oct 11 17:05 EVNT.46676267._002622.pool.root.1
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:05 start_atlas.sh
[2025-10-11 17:10:13] drwxrwx--x. 2 boinc boinc      4096 Oct 11 17:05 shared
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc    569679 Oct 11 17:05 input.tar.gz
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc         0 Oct 11 17:05 boinc_lockfile
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc      2550 Oct 11 17:05 pandaJob.out
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc    975528 Oct 11 17:05 agis_schedconf.cvmfs.json
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc   1560580 Oct 11 17:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:10:13] drwx------. 5 boinc boinc      4096 Oct 11 17:05 pilot3
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc       951 Oct 11 17:07 memory_monitor_summary.json
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc     22033 Oct 11 17:07 log.46676269._065295.job.log.tgz.1
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc      8412 Oct 11 17:09 heartbeat.json
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc        22 Oct 11 17:10 wrapper_checkpoint.txt
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc       523 Oct 11 17:10 boinc_task_state.xml
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc        95 Oct 11 17:10 pilot_heartbeat.json
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc       823 Oct 11 17:10 pilotlog.txt
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc     90893 Oct 11 17:10 log.46676269._065295.job.log.1
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc       188 Oct 11 17:10 output.list
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc       620 Oct 11 17:10 runtime_log
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc    133120 Oct 11 17:10 result.tar.gz
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc      8528 Oct 11 17:10 runtime_log.err
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc       644 Oct 11 17:10 AzzKDmhEwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNdSMDmG53TVo.diag
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc      8192 Oct 11 17:10 boinc_mmap_file
[2025-10-11 17:10:13] -rw-r--r--. 1 boinc boinc     21401 Oct 11 17:10 stderr.txt
[2025-10-11 17:10:13] No HITS result produced
[2025-10-11 17:10:13]  *** Contents of shared directory: ***
[2025-10-11 17:10:13] total 218260
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc 222766560 Oct 11 17:05 ATLAS.root_0
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc     15120 Oct 11 17:05 start_atlas.sh
[2025-10-11 17:10:13] -rw-r--r--. 2 boinc boinc    569679 Oct 11 17:05 input.tar.gz
[2025-10-11 17:10:13] -rw-------. 1 boinc boinc    133120 Oct 11 17:10 result.tar.gz
17:10:15 (3771395): run_atlas exited; CPU time 26.401002
17:10:15 (3771395): called boinc_finish(0)

</stderr_txt>
]]>

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