Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:44 (2216283): wrapper (7.7.26015): starting
19:49:44 (2216283): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:49:44] Arguments: --nthreads 8
[2025-10-11 19:49:44] Threads: 8
[2025-10-11 19:49:44] Checking for CVMFS
[2025-10-11 19:49:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:49:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:49:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:49:45] 2.13.2.0 4298 23592 223688 151600 3 196 23279781 32935937 4331 16776704 0 67817965 99.716 51554527 29848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:49:45] CVMFS is ok
[2025-10-11 19:49:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:49:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:49:45] Further information can be found at the LHC@home message board.
[2025-10-11 19:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:49:45] Checking for apptainer binary...
[2025-10-11 19:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:49:45] Running /usr/bin/apptainer --version
[2025-10-11 19:49:45] apptainer version 1.4.3-1.el9
[2025-10-11 19:49:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:49:45] c-8-24.aglt2.org
[2025-10-11 19:49:45] apptainer works
[2025-10-11 19:49:45] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:49:45] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:49:45] Starting ATLAS job with PandaID=6838773122
[2025-10-11 19:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:35:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:35:13] 2025-10-12 01:34:32,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:35:13] 2025-10-12 01:34:32,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:35:13] 2025-10-12 01:34:32,692 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:35:13] 2025-10-12 01:34:32,693 | INFO     | sum of square deviations: 338804492.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,693 | INFO     | sum of deviations: 5159815051.999996
[2025-10-11 21:35:13] 2025-10-12 01:34:32,693 | INFO     | mean x: 1760229732.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,694 | INFO     | mean y: 2156890.349514563
[2025-10-11 21:35:13] 2025-10-12 01:34:32,694 | INFO     | -- intersect: -26805220463.28817
[2025-10-11 21:35:13] 2025-10-12 01:34:32,694 | INFO     | intersect: -26805220463.28817
[2025-10-11 21:35:13] 2025-10-12 01:34:32,694 | INFO     | chi2: 2.50075722018419
[2025-10-11 21:35:13] 2025-10-12 01:34:32,695 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,695 | INFO     | sum of deviations: 10787383624.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,695 | INFO     | mean x: 1760229579.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,695 | INFO     | mean y: 2174365.8061224488
[2025-10-11 21:35:13] 2025-10-12 01:34:32,696 | INFO     | -- intersect: -65066807255.61654
[2025-10-11 21:35:13] 2025-10-12 01:34:32,696 | INFO     | intersect: -65066807255.61654
[2025-10-11 21:35:13] 2025-10-12 01:34:32,696 | INFO     | chi2: 1.7334993344407217
[2025-10-11 21:35:13] 2025-10-12 01:34:32,696 | INFO     | current chi2=1.7334993344407217 (change=30.681022513931083 %)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,696 | INFO     | sum of square deviations: 249388862.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,697 | INFO     | sum of deviations: 10564709133.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,697 | INFO     | mean x: 1760229427.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,697 | INFO     | mean y: 2173614.559139785
[2025-10-11 21:35:13] 2025-10-12 01:34:32,697 | INFO     | -- intersect: -74565358208.90399
[2025-10-11 21:35:13] 2025-10-12 01:34:32,697 | INFO     | intersect: -74565358208.90399
[2025-10-11 21:35:13] 2025-10-12 01:34:32,698 | INFO     | chi2: 1.735468677989198
[2025-10-11 21:35:13] 2025-10-12 01:34:32,698 | INFO     | current chi2=1.735468677989198 (change=-0.11360509400550707 %)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,698 | INFO     | right removable region: 92
[2025-10-11 21:35:13] 2025-10-12 01:34:32,698 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,699 | INFO     | sum of deviations: -10512096877.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,699 | INFO     | mean x: 1760229884.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,699 | INFO     | mean y: 2206957.3061224488
[2025-10-11 21:35:13] 2025-10-12 01:34:32,699 | INFO     | -- intersect: 63410683082.99362
[2025-10-11 21:35:13] 2025-10-12 01:34:32,699 | INFO     | intersect: 63410683082.99362
[2025-10-11 21:35:13] 2025-10-12 01:34:32,700 | INFO     | chi2: 0.9014633375104675
[2025-10-11 21:35:13] 2025-10-12 01:34:32,700 | INFO     | current chi2=0.9014633375104675 (change=63.95238489228189 %)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,700 | INFO     | sum of square deviations: 249388862.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,700 | INFO     | sum of deviations: -11256316763.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | mean x: 1760230037.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | mean y: 2209407.6666666665
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | -- intersect: 79451254217.93254
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | intersect: 79451254217.93254
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | chi2: 0.8641760282038344
[2025-10-11 21:35:13] 2025-10-12 01:34:32,701 | INFO     | current chi2=0.8641760282038344 (change=4.136309016139004 %)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,702 | INFO     | left removable region: 20
[2025-10-11 21:35:13] 2025-10-12 01:34:32,702 | INFO     | sum of square deviations: 115715658.0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,702 | INFO     | sum of deviations: -1663785888.5000002
[2025-10-11 21:35:13] 2025-10-12 01:34:32,702 | INFO     | mean x: 1760230006.5
[2025-10-11 21:35:13] 2025-10-12 01:34:32,702 | INFO     | mean y: 2216996.7083333335
[2025-10-11 21:35:13] 2025-10-12 01:34:32,703 | INFO     | -- intersect: 25311201933.98418
[2025-10-11 21:35:13] 2025-10-12 01:34:32,703 | INFO     | intersect: 25311201933.98418
[2025-10-11 21:35:13] 2025-10-12 01:34:32,703 | INFO     | chi2: 0.033702097381305224
[2025-10-11 21:35:13] 2025-10-12 01:34:32,703 | INFO     | -- intersect: 25311201933.98418
[2025-10-11 21:35:13] 2025-10-12 01:34:32,703 | INFO     | current memory leak: -14.38 B/s (using 72 data points, chi2=0.03)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | could have reported an average CPU frequency of 2688 MHz (7 samples)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | ..............................
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | . Timing measurements:
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | . get job = 0 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | . initial setup = 3 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | . payload setup = 5 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,704 | INFO     | . stage-in = 0 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,705 | INFO     | . payload execution = 6247 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,705 | INFO     | . stage-out = 0 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,705 | INFO     | . log creation = 0 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,705 | INFO     | ..............................
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | 
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | job summary report
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | --------------------------------------------------
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | PanDA job id: 6838773122
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | task id: 46676269
[2025-10-11 21:35:13] 2025-10-12 01:34:32,815 | INFO     | errors: (none)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | pilot state: finished 
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | transexitcode: 0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | exeerrorcode: 0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | exeerrordiag: 
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | exitcode: 0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | exitmsg: OK
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | cpuconsumptiontime: 45251 s
[2025-10-11 21:35:13] 2025-10-12 01:34:32,816 | INFO     | nevents: 400
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | neventsw: 0
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | pid: 2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | pgrp: 2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | corecount: 8
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | event service: False
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | sizes: {0: 2348741, 1: 2348883, 4: 2349145, 11: 2349173, 6256: 2376226, 6257: 2385408, 6261: 2385546}
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | --------------------------------------------------
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | 
[2025-10-11 21:35:13] 2025-10-12 01:34:32,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 21:35:13] 2025-10-12 01:34:32,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:35:13] 2025-10-12 01:34:32,838 | INFO     | job 6838773122 has completed (purged errors)
[2025-10-11 21:35:13] 2025-10-12 01:34:32,838 | INFO     | overall cleanup function is called
[2025-10-11 21:35:13] 2025-10-12 01:34:33,847 | INFO     | --- collectZombieJob: --- 10, [2229370]
[2025-10-11 21:35:13] 2025-10-12 01:34:33,847 | INFO     | zombie collector waiting for pid 2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:33,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:35:13] 2025-10-12 01:34:33,847 | INFO     | collected zombie processes
[2025-10-11 21:35:13] 2025-10-12 01:34:33,847 | INFO     | will attempt to kill all subprocesses of pid=2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:34,099 | INFO     | process IDs to be killed: [2229370] (in reverse order)
[2025-10-11 21:35:13] 2025-10-12 01:34:34,171 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:35:13] 2025-10-12 01:34:34,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:35:13] 2025-10-12 01:34:34,180 | INFO     | did not find any defunct processes belonging to 2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:34,187 | INFO     | did not find any defunct processes belonging to 2229370
[2025-10-11 21:35:13] 2025-10-12 01:34:34,187 | INFO     | ready for new job
[2025-10-11 21:35:13] 2025-10-12 01:34:34,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:35:13] 2025-10-12 01:34:34,191 | INFO     | ***************************************
[2025-10-11 21:35:13] 2025-10-12 01:34:34,192 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:35:13] 2025-10-12 01:34:34,192 | INFO     | ***************************************
[2025-10-11 21:35:13] 2025-10-12 01:34:34,192 | INFO     | 
[2025-10-11 21:35:13] 2025-10-12 01:34:34,206 | INFO     | architecture information:
[2025-10-11 21:35:13] 2025-10-12 01:34:34,206 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:35:13] 2025-10-12 01:34:34,218 | INFO     | cat /etc/os-release:
[2025-10-11 21:35:13] NAME="CentOS Linux"
[2025-10-11 21:35:13] VERSION="7 (Core)"
[2025-10-11 21:35:13] ID="centos"
[2025-10-11 21:35:13] ID_LIKE="rhel fedora"
[2025-10-11 21:35:13] VERSION_ID="7"
[2025-10-11 21:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:35:13] ANSI_COLOR="0;31"
[2025-10-11 21:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:35:13] HOME_URL="https://www.centos.org/"
[2025-10-11 21:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:35:13] 
[2025-10-11 21:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:35:13] 
[2025-10-11 21:35:13] 2025-10-12 01:34:34,218 | INFO     | ***************************************
[2025-10-11 21:35:13] 2025-10-12 01:34:34,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 21:35:13] 2025-10-12 01:34:34,737 | INFO     | sufficient remaining disk space (74401710080 B)
[2025-10-11 21:35:13] 2025-10-12 01:34:34,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:35:13] 2025-10-12 01:34:34,737 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:35:13] 2025-10-12 01:34:34,737 | INFO     | update_server=False
[2025-10-11 21:35:13] 2025-10-12 01:34:34,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:35:13] 2025-10-12 01:34:34,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:35:13] 2025-10-12 01:34:34,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:35:13] 2025-10-12 01:34:34,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:35:13] 2025-10-12 01:34:34,739 | INFO     | aborting loop
[2025-10-11 21:35:13] 2025-10-12 01:34:34,914 | INFO     | all payload control threads have been joined
[2025-10-11 21:35:13] 2025-10-12 01:34:35,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:35:13] 2025-10-12 01:34:35,185 | INFO     | all data control threads have been joined
[2025-10-11 21:35:13] 2025-10-12 01:34:35,491 | INFO     | all job control threads have been joined
[2025-10-11 21:35:13] 2025-10-12 01:34:35,743 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:35,744 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:35,745 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:35,806 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:35,919 | INFO     | [payload] control thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,190 | INFO     | [data] control thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,482 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,496 | INFO     | [job] control thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,503 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,745 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,812 | INFO     | [job] validate thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,888 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:36,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:37,074 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:37,267 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:39,109 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:35:13] 2025-10-12 01:34:52,417 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-11 21:35:13] 2025-10-12 01:35:05,016 | INFO     | PID=2219933 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:35:13] 2025-10-12 01:35:05,016 | INFO     | .. there are 6 such processes running
[2025-10-11 21:35:13] 2025-10-12 01:35:05,017 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:35:13] 2025-10-12 01:35:05,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:35:13] 2025-10-12 01:35:05,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:35:13] 2025-10-12 01:35:06,927 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:35:13] 2025-10-12 01:35:08,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169614485312)>', '<ExcThread(monitor, started 140168967202560)>']
[2025-10-11 21:35:13] 2025-10-12 01:35:09,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:35:13] 2025-10-12 01:35:09,031 | INFO     | [monitor] control thread has ended
[2025-10-11 21:35:13] 2025-10-12 01:35:13,083 | INFO     | all workflow threads have been joined
[2025-10-11 21:35:13] 2025-10-12 01:35:13,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:35:13] 2025-10-12 01:35:13,083 | INFO     | traces error code: 0
[2025-10-11 21:35:13] 2025-10-12 01:35:13,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:35:13] 2025-10-12 01:35:13,198 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:35:13] 2025-10-12 01:35:13,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:35:13] 2025-10-12 01:35:13,204 [wrapper] pilotpid: 2219933
[2025-10-11 21:35:13] 2025-10-12 01:35:13,207 [wrapper] Pilot exit status: 0
[2025-10-11 21:35:13] 2025-10-12 01:35:13,216 [wrapper] pandaids: 6838773122
[2025-10-11 21:35:13] 2025-10-12 01:35:13,267 [wrapper] cleanup supervisor_pilot 2506559 2219934
[2025-10-11 21:35:13] 2025-10-12 01:35:13,269 [wrapper] Test setup, not cleaning
[2025-10-11 21:35:13] 2025-10-12 01:35:13,272 [wrapper] apfmon messages muted
[2025-10-11 21:35:13] 2025-10-12 01:35:13,274 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:35:13] 2025-10-12 01:35:13,276 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:35:13]  *** Error codes and diagnostics ***
[2025-10-11 21:35:13]     "exeErrorCode": 0,
[2025-10-11 21:35:13]     "exeErrorDiag": "",
[2025-10-11 21:35:13]     "pilotErrorCode": 0,
[2025-10-11 21:35:13]     "pilotErrorDiag": "",
[2025-10-11 21:35:13]  *** Listing of results directory ***
[2025-10-11 21:35:13] total 412164
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:25 queuedata.json
[2025-10-11 21:35:13] -rwx------. 1 boincer umatlas     36292 Oct 11 14:26 runpilot2-wrapper.sh
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:35:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:49 run_atlas
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:49 job.xml
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas 221327724 Oct 11 19:49 EVNT.46676267._002513.pool.root.1
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:49 start_atlas.sh
[2025-10-11 21:35:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:49 shared
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 19:49 input.tar.gz
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:49 boinc_lockfile
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 19:49 pandaJob.out
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas    975528 Oct 11 19:49 agis_schedconf.cvmfs.json
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:35:13] drwx------. 5 boincer umatlas      4096 Oct 11 19:49 pilot3
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 21:27 init_data.xml
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas 194316080 Oct 11 21:33 HITS.46676269._062552.pool.root.1
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas       529 Oct 11 21:33 boinc_task_state.xml
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas      1032 Oct 11 21:34 memory_monitor_summary.json
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas    338781 Oct 11 21:34 log.46676269._062552.job.log.tgz.1
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas      7810 Oct 11 21:34 heartbeat.json
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas        95 Oct 11 21:35 pilot_heartbeat.json
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:35 boinc_mmap_file
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:35 wrapper_checkpoint.txt
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas      4823 Oct 11 21:35 pilotlog.txt
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas    914296 Oct 11 21:35 log.46676269._062552.job.log.1
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas       357 Oct 11 21:35 output.list
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:35 runtime_log
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas   1269760 Oct 11 21:35 result.tar.gz
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas       650 Oct 11 21:35 tuaMDmETtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlEhNDmyyDNUn.diag
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 21:35 runtime_log.err
[2025-10-11 21:35:13] -rw-r--r--. 1 boincer umatlas     20864 Oct 11 21:35 stderr.txt
[2025-10-11 21:35:13] HITS file was successfully produced:
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas 194316080 Oct 11 21:33 shared/HITS.pool.root.1
[2025-10-11 21:35:13]  *** Contents of shared directory: ***
[2025-10-11 21:35:13] total 407732
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas 221327724 Oct 11 19:49 ATLAS.root_0
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:49 start_atlas.sh
[2025-10-11 21:35:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 19:49 input.tar.gz
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas 194316080 Oct 11 21:33 HITS.pool.root.1
[2025-10-11 21:35:13] -rw-------. 1 boincer umatlas   1269760 Oct 11 21:35 result.tar.gz
21:35:15 (2216283): run_atlas exited; CPU time 45411.777335
21:35:15 (2216283): called boinc_finish(0)

</stderr_txt>
]]>

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