Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:41:21 (5296): wrapper (7.7.26015): starting
19:41:21 (5296): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:41:22] Arguments: --nthreads 8
[2025-10-11 19:41:22] Threads: 8
[2025-10-11 19:41:22] Checking for CVMFS
[2025-10-11 19:41:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:41:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:41:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:41:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:41:22] 2.11.2.0 27562 268501 271428 151600 2 57 14433105 18432000 2749 130560 7 626300456 99.263 1123199055 26114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-11 19:41:22] CVMFS is ok
[2025-10-11 19:41:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:41:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:41:22] Further information can be found at the LHC@home message board.
[2025-10-11 19:41:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:41:22] Checking for apptainer binary...
[2025-10-11 19:41:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:41:22] Running /usr/bin/apptainer --version
[2025-10-11 19:41:22] apptainer version 1.3.2-1.el7
[2025-10-11 19:41:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:41:23] c-9-30.aglt2.org
[2025-10-11 19:41:23] apptainer works
[2025-10-11 19:41:23] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:41:23] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:41:23] Starting ATLAS job with PandaID=6838604006
[2025-10-11 19:41:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:21:59]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:21:59] 2025-10-12 02:21:26,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:21:59] 2025-10-12 02:21:26,100 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:21:59] 2025-10-12 02:21:26,101 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,101 | INFO     | sufficient remaining disk space (104812511232 B)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,102 | INFO     | sum of deviations: 5538846237.999999
[2025-10-11 22:21:59] 2025-10-12 02:21:26,103 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,103 | INFO     | mean x: 1760230878.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,103 | INFO     | mean y: 2490913.541401274
[2025-10-11 22:21:59] 2025-10-12 02:21:26,103 | INFO     | -- intersect: -8122617835.898032
[2025-10-11 22:21:59] 2025-10-12 02:21:26,104 | INFO     | intersect: -8122617835.898032
[2025-10-11 22:21:59] 2025-10-12 02:21:26,104 | INFO     | chi2: 1.390672255225109
[2025-10-11 22:21:59] 2025-10-12 02:21:26,104 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,106 | INFO     | sum of deviations: 5306365325.499994
[2025-10-11 22:21:59] 2025-10-12 02:21:26,106 | INFO     | mean x: 1760230725.5
[2025-10-11 22:21:59] 2025-10-12 02:21:26,106 | INFO     | mean y: 2490594.138157895
[2025-10-11 22:21:59] 2025-10-12 02:21:26,106 | INFO     | -- intersect: -8575318054.017436
[2025-10-11 22:21:59] 2025-10-12 02:21:26,106 | INFO     | intersect: -8575318054.017436
[2025-10-11 22:21:59] 2025-10-12 02:21:26,107 | INFO     | chi2: 1.3914022996141462
[2025-10-11 22:21:59] 2025-10-12 02:21:26,107 | INFO     | current chi2=1.3914022996141462 (change=-0.05249579016869502 %)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,107 | INFO     | right removable region: 151
[2025-10-11 22:21:59] 2025-10-12 02:21:26,108 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,109 | INFO     | sum of deviations: -15758562703.499998
[2025-10-11 22:21:59] 2025-10-12 02:21:26,109 | INFO     | mean x: 1760231030.5
[2025-10-11 22:21:59] 2025-10-12 02:21:26,109 | INFO     | mean y: 2519696.2697368423
[2025-10-11 22:21:59] 2025-10-12 02:21:26,109 | INFO     | -- intersect: 25476445928.404118
[2025-10-11 22:21:59] 2025-10-12 02:21:26,109 | INFO     | intersect: 25476445928.404118
[2025-10-11 22:21:59] 2025-10-12 02:21:26,110 | INFO     | chi2: 0.06571178482627488
[2025-10-11 22:21:59] 2025-10-12 02:21:26,110 | INFO     | current chi2=0.06571178482627488 (change=95.27481873752934 %)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,111 | INFO     | sum of square deviations: 984941258.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,112 | INFO     | sum of deviations: -12976839147.999998
[2025-10-11 22:21:59] 2025-10-12 02:21:26,112 | INFO     | mean x: 1760231183.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,112 | INFO     | mean y: 2515554.4421768705
[2025-10-11 22:21:59] 2025-10-12 02:21:26,112 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6838604006: 3594612 B (within 2537553920 B limit)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,112 | INFO     | -- intersect: 23193986862.556217
[2025-10-11 22:21:59] 2025-10-12 02:21:26,113 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6838604006/HITS.46676269._060213.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,113 | INFO     | intersect: 23193986862.556217
[2025-10-11 22:21:59] 2025-10-12 02:21:26,113 | INFO     | total size of present files: 0 B (workdir size: 3594612 B)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,113 | INFO     | chi2: 0.052422274945929125
[2025-10-11 22:21:59] 2025-10-12 02:21:26,113 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6838604006/HITS.46676269._060213.pool.root.1 since it does not exist
[2025-10-11 22:21:59] 2025-10-12 02:21:26,114 | INFO     | current chi2=0.052422274945929125 (change=20.22393687141479 %)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,114 | INFO     | left removable region: 20
[2025-10-11 22:21:59] 2025-10-12 02:21:26,114 | INFO     | sum of square deviations: 697054930.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,115 | INFO     | sum of deviations: -5451261096.000001
[2025-10-11 22:21:59] 2025-10-12 02:21:26,115 | INFO     | mean x: 1760231305.0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,116 | INFO     | mean y: 2503826.671755725
[2025-10-11 22:21:59] 2025-10-12 02:21:26,116 | INFO     | -- intersect: 13768248848.958323
[2025-10-11 22:21:59] 2025-10-12 02:21:26,116 | INFO     | intersect: 13768248848.958323
[2025-10-11 22:21:59] 2025-10-12 02:21:26,116 | INFO     | chi2: 0.022304493624446045
[2025-10-11 22:21:59] 2025-10-12 02:21:26,117 | INFO     | -- intersect: 13768248848.958323
[2025-10-11 22:21:59] 2025-10-12 02:21:26,117 | INFO     | current memory leak: -7.82 B/s (using 131 data points, chi2=0.02)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,118 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,119 | INFO     | ..............................
[2025-10-11 22:21:59] 2025-10-12 02:21:26,119 | INFO     | . Timing measurements:
[2025-10-11 22:21:59] 2025-10-12 02:21:26,119 | INFO     | . get job = 0 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,119 | INFO     | . initial setup = 2 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,119 | INFO     | . payload setup = 5 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,120 | INFO     | . stage-in = 0 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,120 | INFO     | . payload execution = 9561 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,120 | INFO     | . stage-out = 0 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,120 | INFO     | . log creation = 0 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,120 | INFO     | ..............................
[2025-10-11 22:21:59] 2025-10-12 02:21:26,212 | INFO     | 
[2025-10-11 22:21:59] 2025-10-12 02:21:26,212 | INFO     | job summary report
[2025-10-11 22:21:59] 2025-10-12 02:21:26,212 | INFO     | --------------------------------------------------
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | PanDA job id: 6838604006
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | task id: 46676269
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | errors: (none)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | pilot state: finished 
[2025-10-11 22:21:59] 2025-10-12 02:21:26,213 | INFO     | transexitcode: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | exeerrorcode: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | exeerrordiag: 
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | exitcode: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | exitmsg: OK
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | cpuconsumptiontime: 71702 s
[2025-10-11 22:21:59] 2025-10-12 02:21:26,214 | INFO     | nevents: 400
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | neventsw: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | pid: 17385
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | pgrp: 17385
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | corecount: 8
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | event service: False
[2025-10-11 22:21:59] 2025-10-12 02:21:26,215 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 12: 2349202, 9571: 2377621, 9573: 2386803, 9577: 2387033}
[2025-10-11 22:21:59] 2025-10-12 02:21:26,216 | INFO     | --------------------------------------------------
[2025-10-11 22:21:59] 2025-10-12 02:21:26,216 | INFO     | 
[2025-10-11 22:21:59] 2025-10-12 02:21:26,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 22:21:59] 2025-10-12 02:21:26,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:21:59] 2025-10-12 02:21:26,248 | INFO     | job 6838604006 has completed (purged errors)
[2025-10-11 22:21:59] 2025-10-12 02:21:26,248 | INFO     | overall cleanup function is called
[2025-10-11 22:21:59] 2025-10-12 02:21:26,443 | INFO     | number of running child processes to parent process 17385: 1
[2025-10-11 22:21:59] 2025-10-12 02:21:26,444 | INFO     | maximum number of monitored processes: 6
[2025-10-11 22:21:59] 2025-10-12 02:21:26,444 | INFO     | aborting job monitoring since job object (job id=6838604006) has expired
[2025-10-11 22:21:59] 2025-10-12 02:21:27,266 | INFO     | --- collectZombieJob: --- 10, [17385]
[2025-10-11 22:21:59] 2025-10-12 02:21:27,267 | INFO     | zombie collector waiting for pid 17385
[2025-10-11 22:21:59] 2025-10-12 02:21:27,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:21:59] 2025-10-12 02:21:27,267 | INFO     | collected zombie processes
[2025-10-11 22:21:59] 2025-10-12 02:21:27,267 | INFO     | will attempt to kill all subprocesses of pid=17385
[2025-10-11 22:21:59] 2025-10-12 02:21:27,574 | INFO     | process IDs to be killed: [17385] (in reverse order)
[2025-10-11 22:21:59] 2025-10-12 02:21:27,641 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:21:59] 2025-10-12 02:21:27,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:21:59] 2025-10-12 02:21:27,648 | INFO     | did not find any defunct processes belonging to 17385
[2025-10-11 22:21:59] 2025-10-12 02:21:27,652 | INFO     | did not find any defunct processes belonging to 17385
[2025-10-11 22:21:59] 2025-10-12 02:21:27,652 | INFO     | ready for new job
[2025-10-11 22:21:59] 2025-10-12 02:21:27,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:21:59] 2025-10-12 02:21:27,654 | INFO     | ***************************************
[2025-10-11 22:21:59] 2025-10-12 02:21:27,654 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:21:59] 2025-10-12 02:21:27,654 | INFO     | ***************************************
[2025-10-11 22:21:59] 2025-10-12 02:21:27,654 | INFO     | 
[2025-10-11 22:21:59] 2025-10-12 02:21:27,655 | INFO     | architecture information:
[2025-10-11 22:21:59] 2025-10-12 02:21:27,656 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:21:59] 2025-10-12 02:21:27,669 | INFO     | cat /etc/os-release:
[2025-10-11 22:21:59] NAME="CentOS Linux"
[2025-10-11 22:21:59] VERSION="7 (Core)"
[2025-10-11 22:21:59] ID="centos"
[2025-10-11 22:21:59] ID_LIKE="rhel fedora"
[2025-10-11 22:21:59] VERSION_ID="7"
[2025-10-11 22:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:21:59] ANSI_COLOR="0;31"
[2025-10-11 22:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:21:59] HOME_URL="https://www.centos.org/"
[2025-10-11 22:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:21:59] 
[2025-10-11 22:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:21:59] 
[2025-10-11 22:21:59] 2025-10-12 02:21:27,669 | INFO     | ***************************************
[2025-10-11 22:21:59] 2025-10-12 02:21:28,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 22:21:59] 2025-10-12 02:21:28,191 | INFO     | sufficient remaining disk space (104816705536 B)
[2025-10-11 22:21:59] 2025-10-12 02:21:28,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:21:59] 2025-10-12 02:21:28,191 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:21:59] 2025-10-12 02:21:28,191 | INFO     | update_server=False
[2025-10-11 22:21:59] 2025-10-12 02:21:28,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:21:59] 2025-10-12 02:21:28,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:21:59] 2025-10-12 02:21:28,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:21:59] 2025-10-12 02:21:28,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:21:59] 2025-10-12 02:21:28,192 | INFO     | aborting loop
[2025-10-11 22:21:59] 2025-10-12 02:21:28,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:21:59] 2025-10-12 02:21:28,547 | INFO     | all job control threads have been joined
[2025-10-11 22:21:59] 2025-10-12 02:21:28,754 | INFO     | all data control threads have been joined
[2025-10-11 22:21:59] 2025-10-12 02:21:29,196 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,197 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,198 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,216 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,553 | INFO     | [job] control thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,554 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,673 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,696 | INFO     | all payload control threads have been joined
[2025-10-11 22:21:59] 2025-10-12 02:21:29,760 | INFO     | [data] control thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:29,888 | INFO     | [job] validate thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:30,042 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:30,196 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:30,428 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:30,595 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:30,702 | INFO     | [payload] control thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:32,341 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:38,603 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:21:59] 2025-10-12 02:21:39,609 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:21:59] 2025-10-12 02:21:49,839 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:21:59] 2025-10-12 02:21:50,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954903660352)>', '<ExcThread(monitor, started 139954319517440)>']
[2025-10-11 22:21:59] 2025-10-12 02:21:55,060 | INFO     | all workflow threads have been joined
[2025-10-11 22:21:59] 2025-10-12 02:21:55,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:21:59] 2025-10-12 02:21:55,061 | INFO     | traces error code: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:55,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:21:59] 2025-10-12 02:21:58,769 | INFO     | PID=9215 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 22:21:59] 2025-10-12 02:21:58,769 | INFO     | .. there are 4 such processes running
[2025-10-11 22:21:59] 2025-10-12 02:21:58,770 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:21:59] 2025-10-12 02:21:58,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:21:59] 2025-10-12 02:21:58,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:21:59] 2025-10-12 02:21:58,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:21:59] 2025-10-12 02:21:58,770 | INFO     | [monitor] control thread has ended
[2025-10-11 22:21:59] 2025-10-12 02:21:58,859 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:21:59] 2025-10-12 02:21:58,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:21:59] 2025-10-12 02:21:58,863 [wrapper] pilotpid: 9215
[2025-10-11 22:21:59] 2025-10-12 02:21:58,865 [wrapper] Pilot exit status: 0
[2025-10-11 22:21:59] 2025-10-12 02:21:58,925 [wrapper] pandaids: 6838604006
[2025-10-11 22:21:59] 2025-10-12 02:21:59,001 [wrapper] cleanup supervisor_pilot 15625 9216
[2025-10-11 22:21:59] 2025-10-12 02:21:59,015 [wrapper] Test setup, not cleaning
[2025-10-11 22:21:59] 2025-10-12 02:21:59,018 [wrapper] apfmon messages muted
[2025-10-11 22:21:59] 2025-10-12 02:21:59,021 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:21:59] 2025-10-12 02:21:59,023 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:21:59]  *** Error codes and diagnostics ***
[2025-10-11 22:21:59]     "exeErrorCode": 0,
[2025-10-11 22:21:59]     "exeErrorDiag": "",
[2025-10-11 22:21:59]     "pilotErrorCode": 0,
[2025-10-11 22:21:59]     "pilotErrorDiag": "",
[2025-10-11 22:21:59]  *** Listing of results directory ***
[2025-10-11 22:21:59] total 409760
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:21 pilot3.tar.gz
[2025-10-11 22:21:59] -rwx------ 1 boincer umatlas     36292 Oct 11 11:24 runpilot2-wrapper.sh
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 11:24 queuedata.json
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas       100 Oct 11 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:21:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 19:41 run_atlas
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas       105 Oct 11 19:41 job.xml
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas 222672776 Oct 11 19:41 EVNT.46676267._002418.pool.root.1
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:41 start_atlas.sh
[2025-10-11 22:21:59] drwxrwx--x 2 boincer umatlas      4096 Oct 11 19:41 shared
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 19:41 input.tar.gz
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas         0 Oct 11 19:41 boinc_lockfile
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 19:41 pandaJob.out
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas    975528 Oct 11 19:41 agis_schedconf.cvmfs.json
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas   1560580 Oct 11 19:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:21:59] drwx------ 5 boincer umatlas      4096 Oct 11 19:41 pilot3
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas      6034 Oct 11 22:19 init_data.xml
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas 189553672 Oct 11 22:20 HITS.46676269._060213.pool.root.1
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas       530 Oct 11 22:20 boinc_task_state.xml
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas        95 Oct 11 22:21 pilot_heartbeat.json
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas      1046 Oct 11 22:21 memory_monitor_summary.json
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas    398181 Oct 11 22:21 log.46676269._060213.job.log.tgz.1
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas      7835 Oct 11 22:21 heartbeat.json
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas        27 Oct 11 22:21 wrapper_checkpoint.txt
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 22:21 boinc_mmap_file
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas       819 Oct 11 22:21 pilotlog.txt
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas   1337246 Oct 11 22:21 log.46676269._060213.job.log.1
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas       357 Oct 11 22:21 output.list
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas       620 Oct 11 22:21 runtime_log
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas   1751040 Oct 11 22:21 result.tar.gz
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas      8693 Oct 11 22:21 runtime_log.err
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas       657 Oct 11 22:21 MUgNDm8cqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYngNDmmjdUmn.diag
[2025-10-11 22:21:59] -rw-r--r-- 1 boincer umatlas     21320 Oct 11 22:21 stderr.txt
[2025-10-11 22:21:59] HITS file was successfully produced:
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas 189553672 Oct 11 22:20 shared/HITS.pool.root.1
[2025-10-11 22:21:59]  *** Contents of shared directory: ***
[2025-10-11 22:21:59] total 404860
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas 222672776 Oct 11 19:41 ATLAS.root_0
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:41 start_atlas.sh
[2025-10-11 22:21:59] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 19:41 input.tar.gz
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas 189553672 Oct 11 22:20 HITS.pool.root.1
[2025-10-11 22:21:59] -rw------- 1 boincer umatlas   1751040 Oct 11 22:21 result.tar.gz
22:22:01 (5296): run_atlas exited; CPU time 72007.811607
22:22:01 (5296): called boinc_finish(0)

</stderr_txt>
]]>

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