Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:04:32 (4112294): wrapper (7.7.26015): starting
21:04:32 (4112294): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 21:04:32] Arguments: --nthreads 9
[2025-10-11 21:04:32] Threads: 9
[2025-10-11 21:04:32] Checking for CVMFS
[2025-10-11 21:04:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:04:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:04:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:04:33] 2.13.2.0 5484 4993 118700 151601 1 331 28141383 40960000 9798 16776704 0 8714624 99.883 2417510 39463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:04:33] CVMFS is ok
[2025-10-11 21:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:04:33] Further information can be found at the LHC@home message board.
[2025-10-11 21:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:04:33] Checking for apptainer binary...
[2025-10-11 21:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:04:33] Running /usr/bin/apptainer --version
[2025-10-11 21:04:33] apptainer version 1.4.3-1.el9
[2025-10-11 21:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:04:33] c-210-35-1.aglt2.org
[2025-10-11 21:04:33] apptainer works
[2025-10-11 21:04:33] Set ATHENA_PROC_NUMBER=9
[2025-10-11 21:04:33] Set ATHENA_CORE_NUMBER=9
[2025-10-11 21:04:33] Starting ATLAS job with PandaID=6838066383
[2025-10-11 21:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:38:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:38:33] 2025-10-12 04:37:24,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:38:33] 2025-10-12 04:37:24,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:38:33] 2025-10-12 04:37:24,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:38:33] 2025-10-12 04:37:24,559 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:38:33] 2025-10-12 04:37:24,560 | INFO     | sum of square deviations: 2790563712.4182677
[2025-10-12 00:38:33] 2025-10-12 04:37:24,561 | INFO     | sum of deviations: 9868894412.254807
[2025-10-12 00:38:33] 2025-10-12 04:37:24,565 | INFO     | mean x: 1760237447.8221154
[2025-10-12 00:38:33] 2025-10-12 04:37:24,565 | INFO     | mean y: 2536019.466346154
[2025-10-12 00:38:33] 2025-10-12 04:37:24,565 | INFO     | -- intersect: -6222585247.519286
[2025-10-12 00:38:33] 2025-10-12 04:37:24,565 | INFO     | intersect: -6222585247.519286
[2025-10-12 00:38:33] 2025-10-12 04:37:24,566 | INFO     | chi2: 2.141683898122017
[2025-10-12 00:38:33] 2025-10-12 04:37:24,566 | INFO     | sum of square deviations: 2594139746.5418706
[2025-10-12 00:38:33] 2025-10-12 04:37:24,567 | INFO     | sum of deviations: 23579255524.0
[2025-10-12 00:38:33] 2025-10-12 04:37:24,567 | INFO     | mean x: 1760237295.325123
[2025-10-12 00:38:33] 2025-10-12 04:37:24,567 | INFO     | mean y: 2546449.0
[2025-10-12 00:38:33] 2025-10-12 04:37:24,567 | INFO     | -- intersect: -15997009868.146854
[2025-10-12 00:38:33] 2025-10-12 04:37:24,567 | INFO     | intersect: -15997009868.146854
[2025-10-12 00:38:33] 2025-10-12 04:37:24,568 | INFO     | chi2: 1.3480136863212584
[2025-10-12 00:38:33] 2025-10-12 04:37:24,568 | INFO     | current chi2=1.3480136863212584 (change=37.05823312659287 %)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,568 | INFO     | sum of square deviations: 2407145312.813114
[2025-10-12 00:38:33] 2025-10-12 04:37:24,573 | INFO     | sum of deviations: 23015194919.707077
[2025-10-12 00:38:33] 2025-10-12 04:37:24,573 | INFO     | mean x: 1760237142.8232324
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | mean y: 2545990.02020202
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | -- intersect: -16827431299.402475
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | intersect: -16827431299.402475
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | chi2: 1.3488057079785394
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | current chi2=1.3488057079785394 (change=-0.05875471928199912 %)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,574 | INFO     | right removable region: 197
[2025-10-12 00:38:33] 2025-10-12 04:37:24,575 | INFO     | sum of square deviations: 2594111686.886694
[2025-10-12 00:38:33] 2025-10-12 04:37:24,576 | INFO     | sum of deviations: -17905126689.03941
[2025-10-12 00:38:33] 2025-10-12 04:37:24,576 | INFO     | mean x: 1760237600.3300493
[2025-10-12 00:38:33] 2025-10-12 04:37:24,576 | INFO     | mean y: 2557301.9408866996
[2025-10-12 00:38:33] 2025-10-12 04:37:24,576 | INFO     | -- intersect: 12152102518.533123
[2025-10-12 00:38:33] 2025-10-12 04:37:24,576 | INFO     | intersect: 12152102518.533123
[2025-10-12 00:38:33] 2025-10-12 04:37:24,577 | INFO     | chi2: 0.8784995823367885
[2025-10-12 00:38:33] 2025-10-12 04:37:24,577 | INFO     | current chi2=0.8784995823367885 (change=58.98089428103185 %)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,581 | INFO     | sum of square deviations: 2407101698.828274
[2025-10-12 00:38:33] 2025-10-12 04:37:24,582 | INFO     | sum of deviations: -15857276644.32323
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | mean x: 1760237752.838384
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | mean y: 2555601.48989899
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | -- intersect: 11598483193.634163
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | intersect: 11598483193.634163
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | chi2: 0.8666125118507293
[2025-10-12 00:38:33] 2025-10-12 04:37:24,583 | INFO     | current chi2=0.8666125118507293 (change=1.3531105449634775 %)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,584 | INFO     | left removable region: 20
[2025-10-12 00:38:33] 2025-10-12 04:37:24,584 | INFO     | sum of square deviations: 1719587369.333335
[2025-10-12 00:38:33] 2025-10-12 04:37:24,589 | INFO     | sum of deviations: 2224274480.6666646
[2025-10-12 00:38:33] 2025-10-12 04:37:24,589 | INFO     | mean x: 1760237722.3333333
[2025-10-12 00:38:33] 2025-10-12 04:37:24,589 | INFO     | mean y: 2563117.514124294
[2025-10-12 00:38:33] 2025-10-12 04:37:24,589 | INFO     | -- intersect: -2274292316.2465615
[2025-10-12 00:38:33] 2025-10-12 04:37:24,589 | INFO     | intersect: -2274292316.2465615
[2025-10-12 00:38:33] 2025-10-12 04:37:24,590 | INFO     | chi2: 0.0006664915804029317
[2025-10-12 00:38:33] 2025-10-12 04:37:24,590 | INFO     | -- intersect: -2274292316.2465615
[2025-10-12 00:38:33] 2025-10-12 04:37:24,590 | INFO     | current memory leak: 1.29 B/s (using 177 data points, chi2=0.00)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | could have reported an average CPU frequency of 2596 MHz (10 samples)
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | ..............................
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . Timing measurements:
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . get job = 0 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . initial setup = 3 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . payload setup = 5 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . stage-in = 0 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,591 | INFO     | . payload execution = 12664 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,592 | INFO     | . stage-out = 8 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,592 | INFO     | . log creation = 2 s
[2025-10-12 00:38:33] 2025-10-12 04:37:24,592 | INFO     | ..............................
[2025-10-12 00:38:33] 2025-10-12 04:37:25,219 | INFO     | 
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | job summary report
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | --------------------------------------------------
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | PanDA job id: 6838066383
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | task id: 46676269
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | errors: (none)
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:38:33] 2025-10-12 04:37:25,220 | INFO     | pilot state: finished 
[2025-10-12 00:38:33] 2025-10-12 04:37:25,226 | INFO     | transexitcode: 0
[2025-10-12 00:38:33] 2025-10-12 04:37:25,226 | INFO     | exeerrorcode: 0
[2025-10-12 00:38:33] 2025-10-12 04:37:25,226 | INFO     | exeerrordiag: 
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | exitcode: 0
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | exitmsg: OK
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | cpuconsumptiontime: 44162 s
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | nevents: 400
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | neventsw: 0
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | pid: 4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | pgrp: 4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | corecount: 9
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | event service: False
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | sizes: {0: 2348858, 1: 2348858, 6: 2349148, 12: 2349176, 12674: 2379245, 12675: 2379244, 12684: 2388426, 12687: 2388482, 12728: 2388676}
[2025-10-12 00:38:33] 2025-10-12 04:37:25,227 | INFO     | --------------------------------------------------
[2025-10-12 00:38:33] 2025-10-12 04:37:25,228 | INFO     | 
[2025-10-12 00:38:33] 2025-10-12 04:37:25,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 00:38:33] 2025-10-12 04:37:25,311 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | job 6838066383 has completed (purged errors)
[2025-10-12 00:38:33] 2025-10-12 04:37:25,313 | INFO     | overall cleanup function is called
[2025-10-12 00:38:33] 2025-10-12 04:37:26,327 | INFO     | --- collectZombieJob: --- 10, [4124738]
[2025-10-12 00:38:33] 2025-10-12 04:37:26,327 | INFO     | zombie collector waiting for pid 4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:26,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:38:33] 2025-10-12 04:37:26,327 | INFO     | collected zombie processes
[2025-10-12 00:38:33] 2025-10-12 04:37:26,328 | INFO     | will attempt to kill all subprocesses of pid=4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:27,264 | INFO     | process IDs to be killed: [4124738] (in reverse order)
[2025-10-12 00:38:33] 2025-10-12 04:37:27,853 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:38:33] 2025-10-12 04:37:27,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:38:33] 2025-10-12 04:37:27,924 | INFO     | did not find any defunct processes belonging to 4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:27,980 | INFO     | did not find any defunct processes belonging to 4124738
[2025-10-12 00:38:33] 2025-10-12 04:37:27,980 | INFO     | ready for new job
[2025-10-12 00:38:33] 2025-10-12 04:37:27,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:38:33] 2025-10-12 04:37:28,012 | INFO     | ***************************************
[2025-10-12 00:38:33] 2025-10-12 04:37:28,012 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:38:33] 2025-10-12 04:37:28,012 | INFO     | ***************************************
[2025-10-12 00:38:33] 2025-10-12 04:37:28,013 | INFO     | 
[2025-10-12 00:38:33] 2025-10-12 04:37:28,023 | INFO     | architecture information:
[2025-10-12 00:38:33] 2025-10-12 04:37:28,027 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:38:33] 2025-10-12 04:37:28,215 | INFO     | cat /etc/os-release:
[2025-10-12 00:38:33] NAME="CentOS Linux"
[2025-10-12 00:38:33] VERSION="7 (Core)"
[2025-10-12 00:38:33] ID="centos"
[2025-10-12 00:38:33] ID_LIKE="rhel fedora"
[2025-10-12 00:38:33] VERSION_ID="7"
[2025-10-12 00:38:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:38:33] ANSI_COLOR="0;31"
[2025-10-12 00:38:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:38:33] HOME_URL="https://www.centos.org/"
[2025-10-12 00:38:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:38:33] 
[2025-10-12 00:38:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:38:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:38:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:38:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:38:33] 
[2025-10-12 00:38:33] 2025-10-12 04:37:28,216 | INFO     | ***************************************
[2025-10-12 00:38:33] 2025-10-12 04:37:28,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 00:38:33] 2025-10-12 04:37:28,892 | INFO     | sufficient remaining disk space (73269248000 B)
[2025-10-12 00:38:33] 2025-10-12 04:37:28,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:38:33] 2025-10-12 04:37:28,892 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:38:33] 2025-10-12 04:37:28,893 | INFO     | update_server=False
[2025-10-12 00:38:33] 2025-10-12 04:37:28,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:38:33] 2025-10-12 04:37:28,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:38:33] 2025-10-12 04:37:28,894 | INFO     | aborting loop
[2025-10-12 00:38:33] 2025-10-12 04:37:29,180 | INFO     | all payload control threads have been joined
[2025-10-12 00:38:33] 2025-10-12 04:37:29,198 | INFO     | all data control threads have been joined
[2025-10-12 00:38:33] 2025-10-12 04:37:29,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:38:33] 2025-10-12 04:37:29,899 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:29,900 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:29,980 | INFO     | all job control threads have been joined
[2025-10-12 00:38:33] 2025-10-12 04:37:30,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,186 | INFO     | [payload] control thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,205 | INFO     | [data] control thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,218 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:38:33] 2025-10-12 04:37:30,287 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,317 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,350 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,483 | INFO     | [job] validate thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,915 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,922 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:30,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:38:33] 2025-10-12 04:37:30,986 | INFO     | [job] control thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:31,284 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:31,490 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:37:35,041 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:38:33] 2025-10-12 04:38:00,946 | INFO     | PID=4117346 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:38:33] 2025-10-12 04:38:00,946 | INFO     | .. there are 11 such processes running
[2025-10-12 00:38:33] 2025-10-12 04:38:00,946 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:38:33] 2025-10-12 04:38:00,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:38:33] 2025-10-12 04:38:00,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:38:33] 2025-10-12 04:38:24,058 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:38:33] 2025-10-12 04:38:25,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338062866240)>', '<ExcThread(monitor, started 140337418843904)>']
[2025-10-12 00:38:33] 2025-10-12 04:38:26,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:38:33] 2025-10-12 04:38:26,341 | INFO     | [monitor] control thread has ended
[2025-10-12 00:38:33] 2025-10-12 04:38:30,910 | INFO     | all workflow threads have been joined
[2025-10-12 00:38:33] 2025-10-12 04:38:30,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:38:33] 2025-10-12 04:38:30,911 | INFO     | traces error code: 0
[2025-10-12 00:38:33] 2025-10-12 04:38:30,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:38:33] 2025-10-12 04:38:32,032 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:38:33] 2025-10-12 04:38:32,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:38:33] 2025-10-12 04:38:32,167 [wrapper] pilotpid: 4117346
[2025-10-12 00:38:33] 2025-10-12 04:38:32,209 [wrapper] Pilot exit status: 0
[2025-10-12 00:38:33] 2025-10-12 04:38:32,378 [wrapper] pandaids: 6838066383
[2025-10-12 00:38:33] 2025-10-12 04:38:32,544 [wrapper] cleanup supervisor_pilot  265832 4117347
[2025-10-12 00:38:33] 2025-10-12 04:38:32,549 [wrapper] Test setup, not cleaning
[2025-10-12 00:38:33] 2025-10-12 04:38:32,572 [wrapper] apfmon messages muted
[2025-10-12 00:38:33] 2025-10-12 04:38:32,625 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:38:33] 2025-10-12 04:38:32,643 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:38:33]  *** Error codes and diagnostics ***
[2025-10-12 00:38:33]     "exeErrorCode": 0,
[2025-10-12 00:38:33]     "exeErrorDiag": "",
[2025-10-12 00:38:33]     "pilotErrorCode": 0,
[2025-10-12 00:38:33]     "pilotErrorDiag": "",
[2025-10-12 00:38:33]  *** Listing of results directory ***
[2025-10-12 00:38:33] total 406220
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 23:42 pilot3.tar.gz
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 00:13 queuedata.json
[2025-10-12 00:38:33] -rwx------. 1 boincer umatlas     36292 Oct 11 00:13 runpilot2-wrapper.sh
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:38:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:04 run_atlas
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:04 job.xml
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas 220585791 Oct 11 21:04 EVNT.46676267._002049.pool.root.1
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:04 input.tar.gz
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:04 start_atlas.sh
[2025-10-12 00:38:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:04 shared
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:04 boinc_lockfile
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas      2551 Oct 11 21:04 pandaJob.out
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas    975496 Oct 11 21:04 agis_schedconf.cvmfs.json
[2025-10-12 00:38:33] drwx------. 5 boincer umatlas      4096 Oct 11 21:05 pilot3
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas 187226186 Oct 12 00:35 HITS.46676269._050920.pool.root.1
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas       530 Oct 12 00:35 boinc_task_state.xml
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas      1056 Oct 12 00:36 memory_monitor_summary.json
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas    446177 Oct 12 00:36 log.46676269._050920.job.log.tgz.1
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 00:36 init_data.xml
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas        95 Oct 12 00:37 pilot_heartbeat.json
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas      7828 Oct 12 00:37 heartbeat.json
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas      4824 Oct 12 00:38 pilotlog.txt
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 00:38 wrapper_checkpoint.txt
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas   1683301 Oct 12 00:38 log.46676269._050920.job.log.1
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 00:38 boinc_mmap_file
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas       357 Oct 12 00:38 output.list
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 00:38 runtime_log
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas   2150400 Oct 12 00:38 result.tar.gz
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas       657 Oct 12 00:38 RzQNDm39fR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfPfNDmub5Ccn.diag
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 00:38 runtime_log.err
[2025-10-12 00:38:33] -rw-r--r--. 1 boincer umatlas     20991 Oct 12 00:38 stderr.txt
[2025-10-12 00:38:33] HITS file was successfully produced:
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas 187226186 Oct 12 00:35 shared/HITS.pool.root.1
[2025-10-12 00:38:33]  *** Contents of shared directory: ***
[2025-10-12 00:38:33] total 400936
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas 220585791 Oct 11 21:04 ATLAS.root_0
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 21:04 input.tar.gz
[2025-10-12 00:38:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:04 start_atlas.sh
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas 187226186 Oct 12 00:35 HITS.pool.root.1
[2025-10-12 00:38:33] -rw-------. 1 boincer umatlas   2150400 Oct 12 00:38 result.tar.gz
00:38:34 (4112294): run_atlas exited; CPU time 44432.639462
00:38:34 (4112294): called boinc_finish(0)

</stderr_txt>
]]>

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