Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:28:41 (4158578): wrapper (7.7.26015): starting
21:28:41 (4158578): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:28:41] Arguments: --nthreads 8
[2025-10-11 21:28:41] Threads: 8
[2025-10-11 21:28:41] Checking for CVMFS
[2025-10-11 21:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:28:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:28:42] 2.13.2.0 1364387 128587 385144 151602 3 290 32139301 32935937 36028 16776704 0 192371279 99.567 228839342 31254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:28:42] CVMFS is ok
[2025-10-11 21:28:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:28:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:28:42] Further information can be found at the LHC@home message board.
[2025-10-11 21:28:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:28:42] Checking for apptainer binary...
[2025-10-11 21:28:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:28:42] Running /usr/bin/apptainer --version
[2025-10-11 21:28:42] apptainer version 1.4.3-1.el9
[2025-10-11 21:28:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:28:43] c6-2-29-2.aglt2.org
[2025-10-11 21:28:43] apptainer works
[2025-10-11 21:28:43] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:28:43] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:28:43] Starting ATLAS job with PandaID=6838774989
[2025-10-11 21:28:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:12:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:12:40] 2025-10-12 04:11:45,369 | INFO     | time since job start (9750s) is within the limit (172800.0s)
[2025-10-12 00:12:40] 2025-10-12 04:11:45,647 | INFO     | monitor loop #616: job 0:6838774989 is in state 'finished'
[2025-10-12 00:12:40] 2025-10-12 04:11:45,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,902 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 00:12:40] 2025-10-12 04:11:46,911 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3141.0957857142853
[2025-10-12 00:12:40] 2025-10-12 04:11:46,923 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838774989/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,925 | INFO     | extracted standard info from prmon json
[2025-10-12 00:12:40] 2025-10-12 04:11:46,925 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:12:40] 2025-10-12 04:11:46,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:12:40] 2025-10-12 04:11:46,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:12:40] 2025-10-12 04:11:46,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:12:40] 2025-10-12 04:11:46,929 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:12:40] 2025-10-12 04:11:46,930 | INFO     | sum of square deviations: 1246368289.7358537
[2025-10-12 00:12:40] 2025-10-12 04:11:46,931 | INFO     | sum of deviations: -13043997287.830194
[2025-10-12 00:12:40] 2025-10-12 04:11:46,931 | INFO     | mean x: 1760237420.509434
[2025-10-12 00:12:40] 2025-10-12 04:11:46,931 | INFO     | mean y: 2164866.5534591195
[2025-10-12 00:12:40] 2025-10-12 04:11:46,931 | INFO     | -- intersect: 18424113120.65126
[2025-10-12 00:12:40] 2025-10-12 04:11:46,931 | INFO     | intersect: 18424113120.65126
[2025-10-12 00:12:40] 2025-10-12 04:11:46,932 | INFO     | chi2: 2.0699888277234852
[2025-10-12 00:12:40] 2025-10-12 04:11:46,932 | INFO     | sum of square deviations: 1132455698.9415545
[2025-10-12 00:12:40] 2025-10-12 04:11:46,933 | INFO     | sum of deviations: -11415925883.292206
[2025-10-12 00:12:40] 2025-10-12 04:11:46,933 | INFO     | mean x: 1760237268.0194805
[2025-10-12 00:12:40] 2025-10-12 04:11:46,933 | INFO     | mean y: 2167015.0974025973
[2025-10-12 00:12:40] 2025-10-12 04:11:46,933 | INFO     | -- intersect: 17746559318.92052
[2025-10-12 00:12:40] 2025-10-12 04:11:46,933 | INFO     | intersect: 17746559318.92052
[2025-10-12 00:12:40] 2025-10-12 04:11:46,934 | INFO     | chi2: 2.067690441453156
[2025-10-12 00:12:40] 2025-10-12 04:11:46,934 | INFO     | current chi2=2.067690441453156 (change=0.11103375243125774 %)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,934 | INFO     | right removable region: 153
[2025-10-12 00:12:40] 2025-10-12 04:11:46,934 | INFO     | sum of square deviations: 1132435141.9740286
[2025-10-12 00:12:40] 2025-10-12 04:11:46,935 | INFO     | sum of deviations: -36327586288.662346
[2025-10-12 00:12:40] 2025-10-12 04:11:46,935 | INFO     | mean x: 1760237573.012987
[2025-10-12 00:12:40] 2025-10-12 04:11:46,935 | INFO     | mean y: 2195695.8311688313
[2025-10-12 00:12:40] 2025-10-12 04:11:46,935 | INFO     | -- intersect: 56469166696.66699
[2025-10-12 00:12:40] 2025-10-12 04:11:46,935 | INFO     | intersect: 56469166696.66699
[2025-10-12 00:12:40] 2025-10-12 04:11:46,936 | INFO     | chi2: 0.4363345907604519
[2025-10-12 00:12:40] 2025-10-12 04:11:46,936 | INFO     | current chi2=0.4363345907604519 (change=78.92092049403377 %)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,936 | INFO     | sum of square deviations: 1025664675.208056
[2025-10-12 00:12:40] 2025-10-12 04:11:46,937 | INFO     | sum of deviations: -33215419636.691288
[2025-10-12 00:12:40] 2025-10-12 04:11:46,937 | INFO     | mean x: 1760237725.5167785
[2025-10-12 00:12:40] 2025-10-12 04:11:46,937 | INFO     | mean y: 2191167.476510067
[2025-10-12 00:12:40] 2025-10-12 04:11:46,937 | INFO     | -- intersect: 57006235595.0715
[2025-10-12 00:12:40] 2025-10-12 04:11:46,937 | INFO     | intersect: 57006235595.0715
[2025-10-12 00:12:40] 2025-10-12 04:11:46,938 | INFO     | chi2: 0.41894908984858326
[2025-10-12 00:12:40] 2025-10-12 04:11:46,938 | INFO     | current chi2=0.41894908984858326 (change=3.9844425081149 %)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,939 | INFO     | left removable region: 20
[2025-10-12 00:12:40] 2025-10-12 04:11:46,939 | INFO     | sum of square deviations: 729460383.203009
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | sum of deviations: -18259265162.383453
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | mean x: 1760237847.518797
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | mean y: 2172971.3533834587
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | -- intersect: 44063029937.40476
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | intersect: 44063029937.40476
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | chi2: 0.3552361199875599
[2025-10-12 00:12:40] 2025-10-12 04:11:46,940 | INFO     | -- intersect: 44063029937.40476
[2025-10-12 00:12:40] 2025-10-12 04:11:46,941 | INFO     | current memory leak: -25.03 B/s (using 133 data points, chi2=0.36)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,941 | INFO     | could have reported an average CPU frequency of 3070 MHz (9 samples)
[2025-10-12 00:12:40] 2025-10-12 04:11:46,941 | INFO     | ..............................
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . Timing measurements:
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . get job = 0 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . initial setup = 3 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . payload setup = 13 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . stage-in = 0 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . payload execution = 9695 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . stage-out = 0 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | . log creation = 0 s
[2025-10-12 00:12:40] 2025-10-12 04:11:46,942 | INFO     | ..............................
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | 
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | job summary report
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | --------------------------------------------------
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | PanDA job id: 6838774989
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | task id: 46676269
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | errors: (none)
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | pilot state: finished 
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | transexitcode: 0
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | exeerrorcode: 0
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | exeerrordiag: 
[2025-10-12 00:12:40] 2025-10-12 04:11:47,041 | INFO     | exitcode: 0
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | exitmsg: OK
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | cpuconsumptiontime: 38470 s
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | nevents: 400
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | neventsw: 0
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | pid: 4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | pgrp: 4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | corecount: 8
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | event service: False
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | sizes: {0: 2348855, 11: 2349145, 9713: 2377595, 9715: 2386649, 9727: 2386879}
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | --------------------------------------------------
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | 
[2025-10-12 00:12:40] 2025-10-12 04:11:47,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 00:12:40] 2025-10-12 04:11:47,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:12:40] 2025-10-12 04:11:47,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:12:40] 2025-10-12 04:11:47,067 | INFO     | job 6838774989 has completed (purged errors)
[2025-10-12 00:12:40] 2025-10-12 04:11:47,067 | INFO     | overall cleanup function is called
[2025-10-12 00:12:40] 2025-10-12 04:11:48,075 | INFO     | --- collectZombieJob: --- 10, [4170283]
[2025-10-12 00:12:40] 2025-10-12 04:11:48,075 | INFO     | zombie collector waiting for pid 4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:48,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:12:40] 2025-10-12 04:11:48,075 | INFO     | collected zombie processes
[2025-10-12 00:12:40] 2025-10-12 04:11:48,075 | INFO     | will attempt to kill all subprocesses of pid=4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:48,493 | INFO     | process IDs to be killed: [4170283] (in reverse order)
[2025-10-12 00:12:40] 2025-10-12 04:11:48,632 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:12:40] 2025-10-12 04:11:48,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:12:40] 2025-10-12 04:11:48,650 | INFO     | did not find any defunct processes belonging to 4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:48,669 | INFO     | did not find any defunct processes belonging to 4170283
[2025-10-12 00:12:40] 2025-10-12 04:11:48,670 | INFO     | ready for new job
[2025-10-12 00:12:40] 2025-10-12 04:11:48,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:12:40] 2025-10-12 04:11:48,672 | INFO     | ***************************************
[2025-10-12 00:12:40] 2025-10-12 04:11:48,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:12:40] 2025-10-12 04:11:48,672 | INFO     | ***************************************
[2025-10-12 00:12:40] 2025-10-12 04:11:48,672 | INFO     | 
[2025-10-12 00:12:40] 2025-10-12 04:11:48,690 | INFO     | architecture information:
[2025-10-12 00:12:40] 2025-10-12 04:11:48,692 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:12:40] 2025-10-12 04:11:48,711 | INFO     | cat /etc/os-release:
[2025-10-12 00:12:40] NAME="CentOS Linux"
[2025-10-12 00:12:40] VERSION="7 (Core)"
[2025-10-12 00:12:40] ID="centos"
[2025-10-12 00:12:40] ID_LIKE="rhel fedora"
[2025-10-12 00:12:40] VERSION_ID="7"
[2025-10-12 00:12:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:12:40] ANSI_COLOR="0;31"
[2025-10-12 00:12:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:12:40] HOME_URL="https://www.centos.org/"
[2025-10-12 00:12:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:12:40] 
[2025-10-12 00:12:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:12:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:12:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:12:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:12:40] 
[2025-10-12 00:12:40] 2025-10-12 04:11:48,711 | INFO     | ***************************************
[2025-10-12 00:12:40] 2025-10-12 04:11:49,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 00:12:40] 2025-10-12 04:11:49,235 | INFO     | sufficient remaining disk space (73437020160 B)
[2025-10-12 00:12:40] 2025-10-12 04:11:49,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:12:40] 2025-10-12 04:11:49,236 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:12:40] 2025-10-12 04:11:49,236 | INFO     | update_server=False
[2025-10-12 00:12:40] 2025-10-12 04:11:49,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:12:40] 2025-10-12 04:11:49,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:12:40] 2025-10-12 04:11:49,237 | INFO     | aborting loop
[2025-10-12 00:12:40] 2025-10-12 04:11:49,385 | INFO     | all data control threads have been joined
[2025-10-12 00:12:40] 2025-10-12 04:11:49,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:12:40] 2025-10-12 04:11:50,244 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,258 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:12:40] 2025-10-12 04:11:50,306 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,392 | INFO     | [data] control thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,447 | INFO     | all payload control threads have been joined
[2025-10-12 00:12:40] 2025-10-12 04:11:50,514 | INFO     | [job] validate thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,653 | INFO     | all job control threads have been joined
[2025-10-12 00:12:40] 2025-10-12 04:11:50,778 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,900 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:50,913 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:51,418 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:51,453 | INFO     | [payload] control thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:51,658 | INFO     | [job] control thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:51,692 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:52,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:12:40] 2025-10-12 04:11:52,271 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:53,066 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:11:53,825 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:12:40] 2025-10-12 04:12:18,977 | INFO     | PID=4163113 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:12:40] 2025-10-12 04:12:18,977 | INFO     | .. there are 45 such processes running
[2025-10-12 00:12:40] 2025-10-12 04:12:18,979 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:12:40] 2025-10-12 04:12:18,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:12:40] 2025-10-12 04:12:18,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:12:40] 2025-10-12 04:12:32,740 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:12:40] 2025-10-12 04:12:33,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256270419776)>', '<ExcThread(monitor, started 140255504099072)>']
[2025-10-12 00:12:40] 2025-10-12 04:12:34,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:12:40] 2025-10-12 04:12:34,065 | INFO     | [monitor] control thread has ended
[2025-10-12 00:12:40] 2025-10-12 04:12:38,333 | INFO     | all workflow threads have been joined
[2025-10-12 00:12:40] 2025-10-12 04:12:38,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:12:40] 2025-10-12 04:12:38,333 | INFO     | traces error code: 0
[2025-10-12 00:12:40] 2025-10-12 04:12:38,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:12:40] 2025-10-12 04:12:39,575 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:12:40] 2025-10-12 04:12:39,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:12:40] 2025-10-12 04:12:39,580 [wrapper] pilotpid: 4163113
[2025-10-12 00:12:40] 2025-10-12 04:12:39,583 [wrapper] Pilot exit status: 0
[2025-10-12 00:12:40] 2025-10-12 04:12:39,602 [wrapper] pandaids: 6838774989
[2025-10-12 00:12:40] 2025-10-12 04:12:39,719 [wrapper] cleanup supervisor_pilot  541238 4163114
[2025-10-12 00:12:40] 2025-10-12 04:12:39,723 [wrapper] Test setup, not cleaning
[2025-10-12 00:12:40] 2025-10-12 04:12:39,726 [wrapper] apfmon messages muted
[2025-10-12 00:12:40] 2025-10-12 04:12:39,730 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:12:40] 2025-10-12 04:12:39,734 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:12:40]  *** Error codes and diagnostics ***
[2025-10-12 00:12:40]     "exeErrorCode": 0,
[2025-10-12 00:12:40]     "exeErrorDiag": "",
[2025-10-12 00:12:40]     "pilotErrorCode": 0,
[2025-10-12 00:12:40]     "pilotErrorDiag": "",
[2025-10-12 00:12:40]  *** Listing of results directory ***
[2025-10-12 00:12:40] total 411748
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 00:12:40] -rwx------. 1 boincer umatlas     36292 Oct 11 14:29 runpilot2-wrapper.sh
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:29 queuedata.json
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:12:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:28 run_atlas
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:28 job.xml
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas 220776735 Oct 11 21:28 EVNT.46676267._002518.pool.root.1
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:28 start_atlas.sh
[2025-10-12 00:12:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:28 shared
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:28 input.tar.gz
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:28 boinc_lockfile
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:28 pandaJob.out
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas    975496 Oct 11 21:29 agis_schedconf.cvmfs.json
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:12:40] drwx------. 5 boincer umatlas      4096 Oct 11 21:29 pilot3
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas 193630972 Oct 12 00:10 HITS.46676269._062677.pool.root.1
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas       530 Oct 12 00:10 boinc_task_state.xml
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 00:11 init_data.xml
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas      1042 Oct 12 00:11 memory_monitor_summary.json
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas    384384 Oct 12 00:11 log.46676269._062677.job.log.tgz.1
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas      7823 Oct 12 00:11 heartbeat.json
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas        95 Oct 12 00:12 pilot_heartbeat.json
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas      4824 Oct 12 00:12 pilotlog.txt
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas   1277552 Oct 12 00:12 log.46676269._062677.job.log.1
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 00:12 boinc_mmap_file
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas       357 Oct 12 00:12 output.list
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas        27 Oct 12 00:12 wrapper_checkpoint.txt
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas       620 Oct 12 00:12 runtime_log
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas   1679360 Oct 12 00:12 result.tar.gz
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas      8708 Oct 12 00:12 runtime_log.err
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas       653 Oct 12 00:12 mISKDmBWtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCGhNDmEZZtcn.diag
[2025-10-12 00:12:40] -rw-r--r--. 1 boincer umatlas     21163 Oct 12 00:12 stderr.txt
[2025-10-12 00:12:40] HITS file was successfully produced:
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas 193630972 Oct 12 00:10 shared/HITS.pool.root.1
[2025-10-12 00:12:40]  *** Contents of shared directory: ***
[2025-10-12 00:12:40] total 406920
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas 220776735 Oct 11 21:28 ATLAS.root_0
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:28 start_atlas.sh
[2025-10-12 00:12:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:28 input.tar.gz
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas 193630972 Oct 12 00:10 HITS.pool.root.1
[2025-10-12 00:12:40] -rw-------. 1 boincer umatlas   1679360 Oct 12 00:12 result.tar.gz
00:12:41 (4158578): run_atlas exited; CPU time 38769.984623
00:12:41 (4158578): called boinc_finish(0)

</stderr_txt>
]]>

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