Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:36:59 (2290708): wrapper (7.7.26015): starting
20:36:59 (2290708): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 20:36:59] Arguments: --nthreads 9
[2025-10-11 20:36:59] Threads: 9
[2025-10-11 20:36:59] Checking for CVMFS
[2025-10-11 20:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:37:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:37:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:37:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:37:02] 2.13.2.0 1061588 21920 383488 151601 3 284 20976457 40960001 57016 16776704 0 79038434 99.798 41626130 15751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 20:37:02] CVMFS is ok
[2025-10-11 20:37:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:37:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:37:02] Further information can be found at the LHC@home message board.
[2025-10-11 20:37:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:37:02] Checking for apptainer binary...
[2025-10-11 20:37:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:37:02] Running /usr/bin/apptainer --version
[2025-10-11 20:37:03] apptainer version 1.4.3-1.el9
[2025-10-11 20:37:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:37:04] c-1-1.aglt2.org
[2025-10-11 20:37:04] apptainer works
[2025-10-11 20:37:04] Set ATHENA_PROC_NUMBER=9
[2025-10-11 20:37:04] Set ATHENA_CORE_NUMBER=9
[2025-10-11 20:37:05] Starting ATLAS job with PandaID=6838632277
[2025-10-11 20:37:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:00:14 (2290708): BOINC client no longer exists - exiting
01:00:14 (2290708): timer handler: client dead, exiting
01:45:19 (3710319): wrapper (7.7.26015): starting
01:45:19 (3710319): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 01:45:19] Arguments: --nthreads 9
[2025-10-12 01:45:19] Threads: 9
[2025-10-12 01:45:19] This job has been restarted, cleaning up previous attempt
[2025-10-12 01:45:19] Checking for CVMFS
[2025-10-12 01:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:45:23] 2.13.2.0 1061588 22228 385896 151609 3 303 22595327 40960000 53339 16776704 0 80700980 99.800 42182454 15738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 01:45:23] CVMFS is ok
[2025-10-12 01:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:45:23] Further information can be found at the LHC@home message board.
[2025-10-12 01:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:45:23] Checking for apptainer binary...
[2025-10-12 01:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:45:23] Running /usr/bin/apptainer --version
[2025-10-12 01:45:23] apptainer version 1.4.3-1.el9
[2025-10-12 01:45:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:45:24] c-1-1.aglt2.org
[2025-10-12 01:45:24] apptainer works
[2025-10-12 01:45:24] Set ATHENA_PROC_NUMBER=9
[2025-10-12 01:45:24] Set ATHENA_CORE_NUMBER=9
[2025-10-12 01:45:25] Starting ATLAS job with PandaID=6838632277
[2025-10-12 01:45:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:40:15 (3710319): BOINC client no longer exists - exiting
12:40:15 (3710319): timer handler: client dead, exiting
12:46:00 (2081616): wrapper (7.7.26015): starting
12:46:00 (2081616): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 12:46:00] Arguments: --nthreads 9
[2025-10-12 12:46:00] Threads: 9
[2025-10-12 12:46:00] This job has been restarted, cleaning up previous attempt
[2025-10-12 12:46:01] Checking for CVMFS
[2025-10-12 12:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:46:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:46:04] 2.13.2.0 1061588 22889 393184 151627 0 181 25288485 40960000 52160 16776704 0 82973543 99.802 42979410 15743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:46:04] CVMFS is ok
[2025-10-12 12:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:46:04] Further information can be found at the LHC@home message board.
[2025-10-12 12:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:46:04] Checking for apptainer binary...
[2025-10-12 12:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:46:04] Running /usr/bin/apptainer --version
[2025-10-12 12:46:04] apptainer version 1.4.3-1.el9
[2025-10-12 12:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:46:05] c-1-1.aglt2.org
[2025-10-12 12:46:05] apptainer works
[2025-10-12 12:46:05] Set ATHENA_PROC_NUMBER=9
[2025-10-12 12:46:05] Set ATHENA_CORE_NUMBER=9
[2025-10-12 12:46:05] Starting ATLAS job with PandaID=6838632277
[2025-10-12 12:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:35:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:35:51] 2025-10-13 03:35:12,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:35:51] 2025-10-13 03:35:12,671 | INFO     | time since job start (38870s) is within the limit (172800.0s)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,564 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 23:35:51] 2025-10-13 03:35:14,643 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 1789.7784625
[2025-10-12 23:35:51] 2025-10-13 03:35:14,683 | INFO     | time since job start (38872s) is within the limit (172800.0s)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,700 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838632277/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,702 | INFO     | extracted standard info from prmon json
[2025-10-12 23:35:51] 2025-10-13 03:35:14,702 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:35:51] 2025-10-13 03:35:14,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:35:51] 2025-10-13 03:35:14,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:35:51] 2025-10-13 03:35:14,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:35:51] 2025-10-13 03:35:14,734 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:35:51] 2025-10-13 03:35:14,736 | INFO     | sum of square deviations: 79020805703.89894
[2025-10-12 23:35:51] 2025-10-13 03:35:14,761 | INFO     | sum of deviations: 300155888376.33203
[2025-10-12 23:35:51] 2025-10-13 03:35:14,762 | INFO     | mean x: 1760307124.0126183
[2025-10-12 23:35:51] 2025-10-13 03:35:14,766 | INFO     | mean y: 2528871.0835962147
[2025-10-12 23:35:51] 2025-10-13 03:35:14,766 | INFO     | -- intersect: -6683894329.953489
[2025-10-12 23:35:51] 2025-10-13 03:35:14,766 | INFO     | intersect: -6683894329.953489
[2025-10-12 23:35:51] 2025-10-13 03:35:14,767 | INFO     | chi2: 3.8245941914643566
[2025-10-12 23:35:51] 2025-10-13 03:35:14,773 | INFO     | sum of square deviations: 77166014235.07619
[2025-10-12 23:35:51] 2025-10-13 03:35:14,804 | INFO     | sum of deviations: 340717705263.9918
[2025-10-12 23:35:51] 2025-10-13 03:35:14,804 | INFO     | mean x: 1760306971.516693
[2025-10-12 23:35:51] 2025-10-13 03:35:14,804 | INFO     | mean y: 2532182.4769475358
[2025-10-12 23:35:51] 2025-10-13 03:35:14,804 | INFO     | -- intersect: -7769901807.287776
[2025-10-12 23:35:51] 2025-10-13 03:35:14,804 | INFO     | intersect: -7769901807.287776
[2025-10-12 23:35:51] 2025-10-13 03:35:14,806 | INFO     | chi2: 3.0060918556540868
[2025-10-12 23:35:51] 2025-10-13 03:35:14,810 | INFO     | current chi2=3.0060918556540868 (change=21.401024391999158 %)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,816 | INFO     | right removable region: 628
[2025-10-12 23:35:51] 2025-10-13 03:35:14,817 | INFO     | sum of square deviations: 77165854415.1069
[2025-10-12 23:35:51] 2025-10-13 03:35:14,861 | INFO     | sum of deviations: 131666336113.35953
[2025-10-12 23:35:51] 2025-10-13 03:35:14,862 | INFO     | mean x: 1760307276.5151033
[2025-10-12 23:35:51] 2025-10-13 03:35:14,862 | INFO     | mean y: 2542704.8569157394
[2025-10-12 23:35:51] 2025-10-13 03:35:14,862 | INFO     | -- intersect: -3001029422.856808
[2025-10-12 23:35:51] 2025-10-13 03:35:14,862 | INFO     | intersect: -3001029422.856808
[2025-10-12 23:35:51] 2025-10-13 03:35:14,863 | INFO     | chi2: 1.2225021511005447
[2025-10-12 23:35:51] 2025-10-13 03:35:14,863 | INFO     | current chi2=1.2225021511005447 (change=68.03576824362445 %)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,865 | INFO     | sum of square deviations: 75340159976.80583
[2025-10-12 23:35:51] 2025-10-13 03:35:14,960 | INFO     | sum of deviations: 74417159334.52896
[2025-10-12 23:35:51] 2025-10-13 03:35:14,960 | INFO     | mean x: 1760307429.0176282
[2025-10-12 23:35:51] 2025-10-13 03:35:14,961 | INFO     | mean y: 2547482.951923077
[2025-10-12 23:35:51] 2025-10-13 03:35:14,965 | INFO     | -- intersect: -1736194224.8343165
[2025-10-12 23:35:51] 2025-10-13 03:35:14,965 | INFO     | intersect: -1736194224.8343165
[2025-10-12 23:35:51] 2025-10-13 03:35:14,966 | INFO     | chi2: 0.9555098485162539
[2025-10-12 23:35:51] 2025-10-13 03:35:14,967 | INFO     | current chi2=0.9555098485162539 (change=21.83982272292395 %)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,967 | INFO     | left removable region: 20
[2025-10-12 23:35:51] 2025-10-13 03:35:14,969 | INFO     | sum of square deviations: 69692132821.6775
[2025-10-12 23:35:51] 2025-10-13 03:35:14,990 | INFO     | sum of deviations: 61746225814.38806
[2025-10-12 23:35:51] 2025-10-13 03:35:14,990 | INFO     | mean x: 1760307551.0230262
[2025-10-12 23:35:51] 2025-10-13 03:35:14,990 | INFO     | mean y: 2555630.115131579
[2025-10-12 23:35:51] 2025-10-13 03:35:14,990 | INFO     | -- intersect: -1557051504.1126764
[2025-10-12 23:35:51] 2025-10-13 03:35:14,990 | INFO     | intersect: -1557051504.1126764
[2025-10-12 23:35:51] 2025-10-13 03:35:14,996 | INFO     | chi2: 0.0076772867727234245
[2025-10-12 23:35:51] 2025-10-13 03:35:14,996 | INFO     | -- intersect: -1557051504.1126764
[2025-10-12 23:35:51] 2025-10-13 03:35:14,996 | INFO     | current memory leak: 0.89 B/s (using 608 data points, chi2=0.01)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,997 | INFO     | could have reported an average CPU frequency of 1749 MHz (24 samples)
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | ..............................
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . Timing measurements:
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . get job = 0 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . initial setup = 4 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . payload setup = 51 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . stage-in = 0 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . payload execution = 38698 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . stage-out = 4 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,998 | INFO     | . log creation = 0 s
[2025-10-12 23:35:51] 2025-10-13 03:35:14,999 | INFO     | ..............................
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | 
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | job summary report
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | --------------------------------------------------
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | PanDA job id: 6838632277
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | task id: 46676269
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | errors: (none)
[2025-10-12 23:35:51] 2025-10-13 03:35:15,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | pilot state: finished 
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | transexitcode: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | exeerrorcode: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | exeerrordiag: 
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | exitcode: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | exitmsg: OK
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | cpuconsumptiontime: 72286 s
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | nevents: 400
[2025-10-12 23:35:51] 2025-10-13 03:35:15,288 | INFO     | neventsw: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | pid: 2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | pgrp: 2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | corecount: 9
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | event service: False
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | sizes: {0: 2348686, 1: 2348686, 2: 2348913, 3: 2348913, 14: 2348941, 26: 2348969, 38: 2349125, 40: 2349415, 49: 2349443, 38755: 2389291, 38756: 2389290, 38761: 239
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | --------------------------------------------------
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | 
[2025-10-12 23:35:51] 2025-10-13 03:35:15,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:35:51] 2025-10-13 03:35:15,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:35:51] 2025-10-13 03:35:15,479 | INFO     | job 6838632277 has completed (purged errors)
[2025-10-12 23:35:51] 2025-10-13 03:35:15,495 | INFO     | overall cleanup function is called
[2025-10-12 23:35:51] 2025-10-13 03:35:16,509 | INFO     | --- collectZombieJob: --- 10, [2128349]
[2025-10-12 23:35:51] 2025-10-13 03:35:16,509 | INFO     | zombie collector waiting for pid 2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:16,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:35:51] 2025-10-13 03:35:16,509 | INFO     | collected zombie processes
[2025-10-12 23:35:51] 2025-10-13 03:35:16,510 | INFO     | will attempt to kill all subprocesses of pid=2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:17,820 | INFO     | process IDs to be killed: [2128349] (in reverse order)
[2025-10-12 23:35:51] 2025-10-13 03:35:18,254 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:35:51] 2025-10-13 03:35:18,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:35:51] 2025-10-13 03:35:18,344 | INFO     | did not find any defunct processes belonging to 2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:18,440 | INFO     | did not find any defunct processes belonging to 2128349
[2025-10-12 23:35:51] 2025-10-13 03:35:18,441 | INFO     | ready for new job
[2025-10-12 23:35:51] 2025-10-13 03:35:18,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:35:51] 2025-10-13 03:35:18,449 | INFO     | ***************************************
[2025-10-12 23:35:51] 2025-10-13 03:35:18,449 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:35:51] 2025-10-13 03:35:18,450 | INFO     | ***************************************
[2025-10-12 23:35:51] 2025-10-13 03:35:18,450 | INFO     | 
[2025-10-12 23:35:51] 2025-10-13 03:35:18,469 | INFO     | architecture information:
[2025-10-12 23:35:51] 2025-10-13 03:35:18,470 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:35:51] 2025-10-13 03:35:18,506 | INFO     | cat /etc/os-release:
[2025-10-12 23:35:51] NAME="CentOS Linux"
[2025-10-12 23:35:51] VERSION="7 (Core)"
[2025-10-12 23:35:51] ID="centos"
[2025-10-12 23:35:51] ID_LIKE="rhel fedora"
[2025-10-12 23:35:51] VERSION_ID="7"
[2025-10-12 23:35:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:35:51] ANSI_COLOR="0;31"
[2025-10-12 23:35:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:35:51] HOME_URL="https://www.centos.org/"
[2025-10-12 23:35:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:35:51] 
[2025-10-12 23:35:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:35:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:35:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:35:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:35:51] 
[2025-10-12 23:35:51] 2025-10-13 03:35:18,507 | INFO     | ***************************************
[2025-10-12 23:35:51] 2025-10-13 03:35:19,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:35:51] 2025-10-13 03:35:19,060 | INFO     | sufficient remaining disk space (106427318272 B)
[2025-10-12 23:35:51] 2025-10-13 03:35:19,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:35:51] 2025-10-13 03:35:19,061 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:35:51] 2025-10-13 03:35:19,061 | INFO     | update_server=False
[2025-10-12 23:35:51] 2025-10-13 03:35:19,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:35:51] 2025-10-13 03:35:19,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:35:51] 2025-10-13 03:35:19,062 | INFO     | aborting loop
[2025-10-12 23:35:51] 2025-10-13 03:35:19,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:35:51] 2025-10-13 03:35:19,256 | INFO     | all job control threads have been joined
[2025-10-12 23:35:51] 2025-10-13 03:35:19,357 | INFO     | all data control threads have been joined
[2025-10-12 23:35:51] 2025-10-13 03:35:19,692 | INFO     | all payload control threads have been joined
[2025-10-12 23:35:51] 2025-10-13 03:35:19,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:35:51] 2025-10-13 03:35:20,066 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,084 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,131 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,262 | INFO     | [job] control thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:35:51] 2025-10-13 03:35:20,362 | INFO     | [data] control thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,522 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,569 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,589 | INFO     | [job] validate thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,698 | INFO     | [payload] control thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:20,927 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:21,068 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:21,293 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:21,382 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:21,497 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:21,667 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:23,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:35:51] 2025-10-13 03:35:39,017 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:35:51] 2025-10-13 03:35:39,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702800398144)>', '<ExcThread(monitor, started 140702306522880)>']
[2025-10-12 23:35:51] 2025-10-13 03:35:44,280 | INFO     | all workflow threads have been joined
[2025-10-12 23:35:51] 2025-10-13 03:35:44,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:35:51] 2025-10-13 03:35:44,281 | INFO     | traces error code: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:44,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:35:51] 2025-10-13 03:35:49,329 | INFO     | PID=2097930 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:35:51] 2025-10-13 03:35:49,333 | INFO     | .. there are 61 such processes running
[2025-10-12 23:35:51] 2025-10-13 03:35:49,334 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:35:51] 2025-10-13 03:35:49,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:35:51] 2025-10-13 03:35:49,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:35:51] 2025-10-13 03:35:49,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:35:51] 2025-10-13 03:35:49,335 | INFO     | [monitor] control thread has ended
[2025-10-12 23:35:51] 2025-10-13 03:35:49,669 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:35:51] 2025-10-13 03:35:49,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:35:51] 2025-10-13 03:35:49,745 [wrapper] pilotpid: 2097930
[2025-10-12 23:35:51] 2025-10-13 03:35:49,753 [wrapper] Pilot exit status: 0
[2025-10-12 23:35:51] 2025-10-13 03:35:49,878 [wrapper] pandaids: 6838632277 6838632277 6838632277
[2025-10-12 23:35:51] 2025-10-13 03:35:50,513 [wrapper] cleanup supervisor_pilot  352922 2097931
[2025-10-12 23:35:51] 2025-10-13 03:35:50,535 [wrapper] Test setup, not cleaning
[2025-10-12 23:35:51] 2025-10-13 03:35:50,552 [wrapper] apfmon messages muted
[2025-10-12 23:35:51] 2025-10-13 03:35:50,571 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:35:51] 2025-10-13 03:35:50,575 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:35:51]  *** Error codes and diagnostics ***
[2025-10-12 23:35:51]     "exeErrorCode": 0,
[2025-10-12 23:35:51]     "exeErrorDiag": "",
[2025-10-12 23:35:51]     "pilotErrorCode": 0,
[2025-10-12 23:35:51]     "pilotErrorDiag": "",
[2025-10-12 23:35:51]  *** Listing of results directory ***
[2025-10-12 23:35:51] total 629180
[2025-10-12 23:35:51] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:18 queuedata.json
[2025-10-12 23:35:51] -rwx------. 1 boincer umatlas     36292 Oct 11 12:19 runpilot2-wrapper.sh
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas       100 Oct 11 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:35:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 20:36 run_atlas
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas       105 Oct 11 20:36 job.xml
[2025-10-12 23:35:51] -rw-r--r--. 3 boincer umatlas 219205603 Oct 11 20:36 EVNT.46676267._002442.pool.root.1
[2025-10-12 23:35:51] -rw-r--r--. 3 boincer umatlas 219205603 Oct 11 20:36 ATLAS.root_0
[2025-10-12 23:35:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:36 start_atlas.sh
[2025-10-12 23:35:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 20:36 shared
[2025-10-12 23:35:51] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 20:36 input.tar.gz
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas         0 Oct 11 20:36 boinc_lockfile
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:46 pandaJob.out
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas    975528 Oct 12 12:47 agis_schedconf.cvmfs.json
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 23:30 init_data.xml
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas 193385107 Oct 12 23:33 HITS.46676269._060807.pool.root.1
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas       532 Oct 12 23:33 boinc_task_state.xml
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas      1043 Oct 12 23:34 memory_monitor_summary.json
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas    693870 Oct 12 23:34 log.46676269._060807.job.log.tgz.1
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas      7819 Oct 12 23:35 heartbeat.json
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:35 boinc_mmap_file
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas        29 Oct 12 23:35 wrapper_checkpoint.txt
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas        97 Oct 12 23:35 pilot_heartbeat.json
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas       823 Oct 12 23:35 pilotlog.txt
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas   3595738 Oct 12 23:35 log.46676269._060807.job.log.1
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas       357 Oct 12 23:35 output.list
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:35 runtime_log
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas   4311040 Oct 12 23:35 result.tar.gz
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas      8774 Oct 12 23:35 runtime_log.err
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas       904 Oct 12 23:35 nwYKDmVUrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8ugNDmz9zU7n.diag
[2025-10-12 23:35:51] -rw-r--r--. 1 boincer umatlas     25812 Oct 12 23:35 stderr.txt
[2025-10-12 23:35:51] HITS file was successfully produced:
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas 193385107 Oct 12 23:33 shared/HITS.pool.root.1
[2025-10-12 23:35:51]  *** Contents of shared directory: ***
[2025-10-12 23:35:51] total 407716
[2025-10-12 23:35:51] -rw-r--r--. 3 boincer umatlas 219205603 Oct 11 20:36 ATLAS.root_0
[2025-10-12 23:35:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 20:36 start_atlas.sh
[2025-10-12 23:35:51] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 20:36 input.tar.gz
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas 193385107 Oct 12 23:33 HITS.pool.root.1
[2025-10-12 23:35:51] -rw-------. 1 boincer umatlas   4311040 Oct 12 23:35 result.tar.gz
23:35:52 (2081616): run_atlas exited; CPU time 75055.800488
23:35:52 (2081616): called boinc_finish(0)

</stderr_txt>
]]>

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