Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:32 (11466): wrapper (7.7.26015): starting
19:49:32 (11466): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:49:32] Arguments: --nthreads 8
[2025-10-11 19:49:32] Threads: 8
[2025-10-11 19:49:32] Checking for CVMFS
[2025-10-11 19:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:49:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:49:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:49:33] 2.11.2.0 1598 215444 125812 151600 0 188 19788551 20275200 917 130560 1 219744527 99.992 11677663 11156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:49:33] CVMFS is ok
[2025-10-11 19:49:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:49:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:49:33] Further information can be found at the LHC@home message board.
[2025-10-11 19:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:49:33] Checking for apptainer binary...
[2025-10-11 19:49:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:49:33] Running /usr/bin/apptainer --version
[2025-10-11 19:49:33] apptainer version 1.3.2-1.el7
[2025-10-11 19:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:49:33] c-205-36.aglt2.org
[2025-10-11 19:49:33] apptainer works
[2025-10-11 19:49:33] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:49:33] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:49:33] Starting ATLAS job with PandaID=6838773171
[2025-10-11 19:49:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:56:58]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:56:58]  status=None
[2025-10-11 20:56:58]  status_code=0
[2025-10-11 20:56:58]  storage_token=
[2025-10-11 20:56:58]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6838773171/log.46676269._062601.job.log.tgz.1
[2025-10-11 20:56:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/d9/log.46676269._062601.job.log.tgz.1
[2025-10-11 20:56:58]  workdir=None
[2025-10-11 20:56:58] ]
[2025-10-11 20:56:58] 2025-10-12 00:56:07,103 | INFO     | transferring file log.46676269._062601.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6838773171/log.46676269._062601.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 20:56:58] 2025-10-12 00:56:07,103 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6838773171/log.46676269._062601.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._062601.job
[2025-10-11 20:56:58] 2025-10-12 00:56:07,125 | INFO     | adding to output.list: log.46676269._062601.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/d9/log.46676269._062601.job.log.tg
[2025-10-11 20:56:58] 2025-10-12 00:56:07,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 20:56:58] 2025-10-12 00:56:07,125 | INFO     | summary of transferred files:
[2025-10-11 20:56:58] 2025-10-12 00:56:07,125 | INFO     |  -- lfn=log.46676269._062601.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 20:56:58] 2025-10-12 00:56:07,126 | INFO     | stage-out finished correctly
[2025-10-11 20:56:58] 2025-10-12 00:56:07,426 | INFO     | monitor loop #296: job 0:6838773171 is in state 'finished'
[2025-10-11 20:56:58] 2025-10-12 00:56:07,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:56:58] 2025-10-12 00:56:07,806 | INFO     | time since job start (3981s) is within the limit (172800.0s)
[2025-10-11 20:56:58] 2025-10-12 00:56:08,808 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:56:58] 2025-10-12 00:56:09,819 | INFO     | time since job start (3983s) is within the limit (172800.0s)
[2025-10-11 20:56:58] 2025-10-12 00:56:09,930 | INFO     | monitor loop #297: job 0:6838773171 is in state 'finished'
[2025-10-11 20:56:58] 2025-10-12 00:56:09,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:56:58] 2025-10-12 00:56:10,209 | INFO     | job 6838773171 has state=finished
[2025-10-11 20:56:58] 2025-10-12 00:56:10,209 | INFO     | preparing for final server update for job 6838773171 in state='finished'
[2025-10-11 20:56:58] 2025-10-12 00:56:10,210 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:56:58] 2025-10-12 00:56:10,210 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:56:58] 2025-10-12 00:56:10,211 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:56:58] 2025-10-12 00:56:10,211 | INFO     | job 6838773171 has finished - writing final server update
[2025-10-11 20:56:58] 2025-10-12 00:56:10,211 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:56:58] 2025-10-12 00:56:10,212 | INFO     | executing command: lscpu
[2025-10-11 20:56:58] 2025-10-12 00:56:10,245 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:56:58] 2025-10-12 00:56:11,824 | INFO     | time since job start (3985s) is within the limit (172800.0s)
[2025-10-11 20:56:58] 2025-10-12 00:56:12,433 | INFO     | monitor loop #298: job 0:6838773171 is in state 'finished'
[2025-10-11 20:56:58] 2025-10-12 00:56:12,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:56:58] 2025-10-12 00:56:13,829 | INFO     | time since job start (3987s) is within the limit (172800.0s)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:56:58] 2025-10-12 00:56:14,281 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2051.5225625000003
[2025-10-11 20:56:58] 2025-10-12 00:56:14,283 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838773171/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,284 | INFO     | extracted standard info from prmon json
[2025-10-11 20:56:58] 2025-10-12 00:56:14,284 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:56:58] 2025-10-12 00:56:14,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:56:58] 2025-10-12 00:56:14,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:56:58] 2025-10-12 00:56:14,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:56:58] 2025-10-12 00:56:14,285 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:56:58] 2025-10-12 00:56:14,285 | INFO     | sum of square deviations: 60482994.5
[2025-10-11 20:56:58] 2025-10-12 00:56:14,285 | INFO     | sum of deviations: -3076039832.5
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | mean x: 1760228654.5
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | mean y: 2573159.603448276
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | -- intersect: 89524156875.99634
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | intersect: 89524156875.99634
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | chi2: 0.013661255303716688
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | -- intersect: 89524156875.99634
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | current memory leak: -50.86 B/s (using 58 data points, chi2=0.01)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | could have reported an average CPU frequency of 2304 MHz (6 samples)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | ..............................
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | . Timing measurements:
[2025-10-11 20:56:58] 2025-10-12 00:56:14,286 | INFO     | . get job = 0 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . initial setup = 2 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . payload setup = 5 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . stage-in = 0 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . payload execution = 3954 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . stage-out = 0 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | . log creation = 0 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,287 | INFO     | ..............................
[2025-10-11 20:56:58] 2025-10-12 00:56:14,449 | INFO     | 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,449 | INFO     | job summary report
[2025-10-11 20:56:58] 2025-10-12 00:56:14,449 | INFO     | --------------------------------------------------
[2025-10-11 20:56:58] 2025-10-12 00:56:14,449 | INFO     | PanDA job id: 6838773171
[2025-10-11 20:56:58] 2025-10-12 00:56:14,449 | INFO     | task id: 46676269
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | errors: (none)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | pilot state: finished 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | transexitcode: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | exeerrorcode: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | exeerrordiag: 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | exitcode: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | exitmsg: OK
[2025-10-11 20:56:58] 2025-10-12 00:56:14,450 | INFO     | cpuconsumptiontime: 29849 s
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | nevents: 400
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | neventsw: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | pid: 22313
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | pgrp: 22313
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | corecount: 8
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | event service: False
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | sizes: {0: 2348680, 1: 2348879, 5: 2349141, 11: 2349197, 3964: 2375144, 3965: 2384142, 3967: 2384326, 3972: 2384520}
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | --------------------------------------------------
[2025-10-11 20:56:58] 2025-10-12 00:56:14,451 | INFO     | 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 20:56:58] 2025-10-12 00:56:14,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:56:58] 2025-10-12 00:56:14,476 | INFO     | job 6838773171 has completed (purged errors)
[2025-10-11 20:56:58] 2025-10-12 00:56:14,476 | INFO     | overall cleanup function is called
[2025-10-11 20:56:58] 2025-10-12 00:56:14,971 | INFO     | PID=15133 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:56:58] 2025-10-12 00:56:14,971 | INFO     | .. there are 2 such processes running
[2025-10-11 20:56:58] 2025-10-12 00:56:15,484 | INFO     | --- collectZombieJob: --- 10, [22313]
[2025-10-11 20:56:58] 2025-10-12 00:56:15,485 | INFO     | zombie collector waiting for pid 22313
[2025-10-11 20:56:58] 2025-10-12 00:56:15,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:56:58] 2025-10-12 00:56:15,485 | INFO     | collected zombie processes
[2025-10-11 20:56:58] 2025-10-12 00:56:15,485 | INFO     | will attempt to kill all subprocesses of pid=22313
[2025-10-11 20:56:58] 2025-10-12 00:56:15,602 | INFO     | process IDs to be killed: [22313] (in reverse order)
[2025-10-11 20:56:58] 2025-10-12 00:56:15,660 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:56:58] 2025-10-12 00:56:15,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:56:58] 2025-10-12 00:56:15,663 | INFO     | did not find any defunct processes belonging to 22313
[2025-10-11 20:56:58] 2025-10-12 00:56:15,666 | INFO     | did not find any defunct processes belonging to 22313
[2025-10-11 20:56:58] 2025-10-12 00:56:15,666 | INFO     | ready for new job
[2025-10-11 20:56:58] 2025-10-12 00:56:15,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:56:58] 2025-10-12 00:56:15,668 | INFO     | ***************************************
[2025-10-11 20:56:58] 2025-10-12 00:56:15,668 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:56:58] 2025-10-12 00:56:15,668 | INFO     | ***************************************
[2025-10-11 20:56:58] 2025-10-12 00:56:15,668 | INFO     | 
[2025-10-11 20:56:58] 2025-10-12 00:56:15,669 | INFO     | architecture information:
[2025-10-11 20:56:58] 2025-10-12 00:56:15,669 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:56:58] 2025-10-12 00:56:15,687 | INFO     | cat /etc/os-release:
[2025-10-11 20:56:58] NAME="CentOS Linux"
[2025-10-11 20:56:58] VERSION="7 (Core)"
[2025-10-11 20:56:58] ID="centos"
[2025-10-11 20:56:58] ID_LIKE="rhel fedora"
[2025-10-11 20:56:58] VERSION_ID="7"
[2025-10-11 20:56:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:56:58] ANSI_COLOR="0;31"
[2025-10-11 20:56:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:56:58] HOME_URL="https://www.centos.org/"
[2025-10-11 20:56:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:56:58] 
[2025-10-11 20:56:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:56:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:56:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:56:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:56:58] 
[2025-10-11 20:56:58] 2025-10-12 00:56:15,687 | INFO     | ***************************************
[2025-10-11 20:56:58] 2025-10-12 00:56:16,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 20:56:58] 2025-10-12 00:56:16,206 | INFO     | sufficient remaining disk space (32786874368 B)
[2025-10-11 20:56:58] 2025-10-12 00:56:16,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:56:58] 2025-10-12 00:56:16,207 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:56:58] 2025-10-12 00:56:16,207 | INFO     | update_server=False
[2025-10-11 20:56:58] 2025-10-12 00:56:16,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:56:58] 2025-10-12 00:56:16,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:56:58] 2025-10-12 00:56:16,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:56:58] 2025-10-12 00:56:16,208 | INFO     | aborting loop
[2025-10-11 20:56:58] 2025-10-12 00:56:16,443 | INFO     | all payload control threads have been joined
[2025-10-11 20:56:58] 2025-10-12 00:56:17,212 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,213 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,214 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,270 | INFO     | all data control threads have been joined
[2025-10-11 20:56:58] 2025-10-12 00:56:17,273 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,288 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,317 | INFO     | all job control threads have been joined
[2025-10-11 20:56:58] 2025-10-12 00:56:17,448 | INFO     | [payload] control thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,584 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:17,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:56:58] 2025-10-12 00:56:18,047 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:18,276 | INFO     | [data] control thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:18,322 | INFO     | [job] control thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:18,337 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:18,452 | INFO     | [job] validate thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:18,642 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:19,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:56:58] 2025-10-12 00:56:19,694 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:23,420 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:56:58] 2025-10-12 00:56:47,197 | INFO     | PID=15133 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:56:58] 2025-10-12 00:56:47,197 | INFO     | .. there are 2 such processes running
[2025-10-11 20:56:58] 2025-10-12 00:56:47,198 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:56:58] 2025-10-12 00:56:47,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:56:58] 2025-10-12 00:56:47,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:56:58] 2025-10-12 00:56:52,282 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:56:58] 2025-10-12 00:56:52,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468810200896)>', '<ExcThread(monitor, started 140468373415680)>']
[2025-10-11 20:56:58] 2025-10-12 00:56:53,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:56:58] 2025-10-12 00:56:53,229 | INFO     | [monitor] control thread has ended
[2025-10-11 20:56:58] 2025-10-12 00:56:57,874 | INFO     | all workflow threads have been joined
[2025-10-11 20:56:58] 2025-10-12 00:56:57,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:56:58] 2025-10-12 00:56:57,874 | INFO     | traces error code: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:57,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:56:58] 2025-10-12 00:56:57,988 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:56:58] 2025-10-12 00:56:57,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:56:58] 2025-10-12 00:56:57,994 [wrapper] pilotpid: 15133
[2025-10-11 20:56:58] 2025-10-12 00:56:57,998 [wrapper] Pilot exit status: 0
[2025-10-11 20:56:58] 2025-10-12 00:56:58,009 [wrapper] pandaids: 6838773171
[2025-10-11 20:56:58] 2025-10-12 00:56:58,051 [wrapper] cleanup supervisor_pilot  1398 15134
[2025-10-11 20:56:58] 2025-10-12 00:56:58,055 [wrapper] Test setup, not cleaning
[2025-10-11 20:56:58] 2025-10-12 00:56:58,059 [wrapper] apfmon messages muted
[2025-10-11 20:56:58] 2025-10-12 00:56:58,062 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:56:58] 2025-10-12 00:56:58,066 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:56:58]  *** Error codes and diagnostics ***
[2025-10-11 20:56:58]     "exeErrorCode": 0,
[2025-10-11 20:56:58]     "exeErrorDiag": "",
[2025-10-11 20:56:58]     "pilotErrorCode": 0,
[2025-10-11 20:56:58]     "pilotErrorDiag": "",
[2025-10-11 20:56:58]  *** Listing of results directory ***
[2025-10-11 20:56:58] total 415736
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 14:25 queuedata.json
[2025-10-11 20:56:58] -rwx------ 1 boincer umatlas     36292 Oct 11 14:25 runpilot2-wrapper.sh
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas       100 Oct 11 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:56:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 19:49 run_atlas
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas       105 Oct 11 19:49 job.xml
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas 220533481 Oct 11 19:49 EVNT.46676267._002515.pool.root.1
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:49 start_atlas.sh
[2025-10-11 20:56:58] drwxrwx--x 2 boincer umatlas      4096 Oct 11 19:49 shared
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 19:49 input.tar.gz
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas         0 Oct 11 19:49 boinc_lockfile
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas      2547 Oct 11 19:49 pandaJob.out
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas    975528 Oct 11 19:49 agis_schedconf.cvmfs.json
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas   1560580 Oct 11 19:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:56:58] drwx------ 5 boincer umatlas      4096 Oct 11 19:49 pilot3
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas 199466007 Oct 11 20:55 HITS.46676269._062601.pool.root.1
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas       529 Oct 11 20:55 boinc_task_state.xml
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas      1045 Oct 11 20:56 memory_monitor_summary.json
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas    303419 Oct 11 20:56 log.46676269._062601.job.log.tgz.1
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas      7835 Oct 11 20:56 heartbeat.json
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas      6135 Oct 11 20:56 init_data.xml
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:56 boinc_mmap_file
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas        27 Oct 11 20:56 wrapper_checkpoint.txt
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas        95 Oct 11 20:56 pilot_heartbeat.json
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas      4821 Oct 11 20:56 pilotlog.txt
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas    598326 Oct 11 20:56 log.46676269._062601.job.log.1
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas       357 Oct 11 20:56 output.list
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:56 runtime_log
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas    921600 Oct 11 20:56 result.tar.gz
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 20:56 runtime_log.err
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas       657 Oct 11 20:56 PRyNDmyStR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNMSMDmIYNWtn.diag
[2025-10-11 20:56:58] -rw-r--r-- 1 boincer umatlas     22068 Oct 11 20:56 stderr.txt
[2025-10-11 20:56:58] HITS file was successfully produced:
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas 199466007 Oct 11 20:55 shared/HITS.pool.root.1
[2025-10-11 20:56:58]  *** Contents of shared directory: ***
[2025-10-11 20:56:58] total 411644
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas 220533481 Oct 11 19:49 ATLAS.root_0
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:49 start_atlas.sh
[2025-10-11 20:56:58] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 19:49 input.tar.gz
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas 199466007 Oct 11 20:55 HITS.pool.root.1
[2025-10-11 20:56:58] -rw------- 1 boincer umatlas    921600 Oct 11 20:56 result.tar.gz
20:56:59 (11466): run_atlas exited; CPU time 29848.901767
20:56:59 (11466): called boinc_finish(0)

</stderr_txt>
]]>

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