Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:45:07 (3819039): wrapper (7.7.26015): starting
19:45:07 (3819039): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:45:07] Arguments: --nthreads 8
[2025-10-11 19:45:07] Threads: 8
[2025-10-11 19:45:07] Checking for CVMFS
[2025-10-11 19:45:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:45:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:45:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:45:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:45:09] 2.13.2.0 1364387 128483 382348 151600 2 232 32036749 32935937 37084 16776704 0 191981451 99.566 228836177 31255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:45:09] CVMFS is ok
[2025-10-11 19:45:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:45:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:45:09] Further information can be found at the LHC@home message board.
[2025-10-11 19:45:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:45:09] Checking for apptainer binary...
[2025-10-11 19:45:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:45:09] Running /usr/bin/apptainer --version
[2025-10-11 19:45:09] apptainer version 1.4.3-1.el9
[2025-10-11 19:45:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:45:09] c6-2-29-2.aglt2.org
[2025-10-11 19:45:09] apptainer works
[2025-10-11 19:45:09] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:45:09] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:45:09] Starting ATLAS job with PandaID=6838182452
[2025-10-11 19:45:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:12:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:12:38] 2025-10-12 04:11:42,357 | INFO     | time since job start (15941s) is within the limit (172800.0s)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,450 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 00:12:38] 2025-10-12 04:11:42,473 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3012.3664999999987
[2025-10-12 00:12:38] 2025-10-12 04:11:42,483 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838182452/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,483 | INFO     | extracted standard info from prmon json
[2025-10-12 00:12:38] 2025-10-12 04:11:42,484 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:12:38] 2025-10-12 04:11:42,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:12:38] 2025-10-12 04:11:42,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:12:38] 2025-10-12 04:11:42,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:12:38] 2025-10-12 04:11:42,489 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:12:38] 2025-10-12 04:11:42,489 | INFO     | sum of square deviations: 5449914393.365425
[2025-10-12 00:12:38] 2025-10-12 04:11:42,491 | INFO     | sum of deviations: 48603108211.63463
[2025-10-12 00:12:38] 2025-10-12 04:11:42,491 | INFO     | mean x: 1760234343.7884614
[2025-10-12 00:12:38] 2025-10-12 04:11:42,491 | INFO     | mean y: 2108220.8115384616
[2025-10-12 00:12:38] 2025-10-12 04:11:42,491 | INFO     | -- intersect: -15695910888.100693
[2025-10-12 00:12:38] 2025-10-12 04:11:42,492 | INFO     | intersect: -15695910888.100693
[2025-10-12 00:12:38] 2025-10-12 04:11:42,492 | INFO     | chi2: 1.8014570716461775
[2025-10-12 00:12:38] 2025-10-12 04:11:42,492 | INFO     | sum of square deviations: 5141522182.94121
[2025-10-12 00:12:38] 2025-10-12 04:11:42,494 | INFO     | sum of deviations: 49453242789.70583
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | mean x: 1760234191.2941177
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | mean y: 2108627.537254902
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | -- intersect: -16928536759.470087
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | intersect: -16928536759.470087
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | chi2: 1.7916987451137556
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | current chi2=1.7916987451137556 (change=0.541690761662432 %)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,495 | INFO     | right removable region: 254
[2025-10-12 00:12:38] 2025-10-12 04:11:42,496 | INFO     | sum of square deviations: 5141476432.94121
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | sum of deviations: 11122310196.588232
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | mean x: 1760234496.2941177
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | mean y: 2126614.525490196
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | -- intersect: -3805704529.284457
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | intersect: -3805704529.284457
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | chi2: 0.24887325278380953
[2025-10-12 00:12:38] 2025-10-12 04:11:42,498 | INFO     | current chi2=0.24887325278380953 (change=86.18489129155942 %)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,499 | INFO     | sum of square deviations: 4844930147.183989
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | sum of deviations: 9606277371.064
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | mean x: 1760234648.792
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | mean y: 2127362.232
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | -- intersect: -3487975025.3703365
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | intersect: -3487975025.3703365
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | chi2: 0.22108390561798938
[2025-10-12 00:12:38] 2025-10-12 04:11:42,501 | INFO     | current chi2=0.22108390561798938 (change=11.166064193310529 %)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,502 | INFO     | left removable region: 20
[2025-10-12 00:12:38] 2025-10-12 04:11:42,502 | INFO     | sum of square deviations: 3972979244.7393074
[2025-10-12 00:12:38] 2025-10-12 04:11:42,503 | INFO     | sum of deviations: 18397043733.427345
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | mean x: 1760234770.7905984
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | mean y: 2123800.376068376
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | -- intersect: -8148715674.109776
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | intersect: -8148715674.109776
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | chi2: 0.17194812570425905
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | -- intersect: -8148715674.109776
[2025-10-12 00:12:38] 2025-10-12 04:11:42,504 | INFO     | current memory leak: 4.63 B/s (using 234 data points, chi2=0.17)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | could have reported an average CPU frequency of 3058 MHz (12 samples)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | ..............................
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | . Timing measurements:
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | . get job = 0 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | . initial setup = 7 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,505 | INFO     | . payload setup = 15 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,506 | INFO     | . stage-in = 0 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,506 | INFO     | . payload execution = 15852 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,506 | INFO     | . stage-out = 2 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,506 | INFO     | . log creation = 0 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,506 | INFO     | ..............................
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | 
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | job summary report
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | --------------------------------------------------
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | PanDA job id: 6838182452
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | task id: 46676269
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | errors: (none)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | pilot state: finished 
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | transexitcode: 0
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | exeerrorcode: 0
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | exeerrordiag: 
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | exitcode: 0
[2025-10-12 00:12:38] 2025-10-12 04:11:42,608 | INFO     | exitmsg: OK
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | cpuconsumptiontime: 40487 s
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | nevents: 400
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | neventsw: 0
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | pid: 3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | pgrp: 3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | corecount: 8
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | event service: False
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 24: 2349203, 34: 2349231, 15872: 2380626, 15875: 2389680, 15887: 2389818}
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | --------------------------------------------------
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | 
[2025-10-12 00:12:38] 2025-10-12 04:11:42,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 00:12:38] 2025-10-12 04:11:42,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,639 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:12:38] 2025-10-12 04:11:42,641 | INFO     | job 6838182452 has completed (purged errors)
[2025-10-12 00:12:38] 2025-10-12 04:11:42,641 | INFO     | overall cleanup function is called
[2025-10-12 00:12:38] 2025-10-12 04:11:43,650 | INFO     | --- collectZombieJob: --- 10, [3835792]
[2025-10-12 00:12:38] 2025-10-12 04:11:43,650 | INFO     | zombie collector waiting for pid 3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:43,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:12:38] 2025-10-12 04:11:43,664 | INFO     | collected zombie processes
[2025-10-12 00:12:38] 2025-10-12 04:11:43,664 | INFO     | will attempt to kill all subprocesses of pid=3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:44,295 | INFO     | process IDs to be killed: [3835792] (in reverse order)
[2025-10-12 00:12:38] 2025-10-12 04:11:44,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:12:38] 2025-10-12 04:11:44,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:12:38] 2025-10-12 04:11:44,448 | INFO     | did not find any defunct processes belonging to 3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:44,464 | INFO     | did not find any defunct processes belonging to 3835792
[2025-10-12 00:12:38] 2025-10-12 04:11:44,464 | INFO     | ready for new job
[2025-10-12 00:12:38] 2025-10-12 04:11:44,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:12:38] 2025-10-12 04:11:44,466 | INFO     | ***************************************
[2025-10-12 00:12:38] 2025-10-12 04:11:44,467 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:12:38] 2025-10-12 04:11:44,467 | INFO     | ***************************************
[2025-10-12 00:12:38] 2025-10-12 04:11:44,467 | INFO     | 
[2025-10-12 00:12:38] 2025-10-12 04:11:44,483 | INFO     | architecture information:
[2025-10-12 00:12:38] 2025-10-12 04:11:44,488 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:12:38] 2025-10-12 04:11:44,531 | INFO     | cat /etc/os-release:
[2025-10-12 00:12:38] NAME="CentOS Linux"
[2025-10-12 00:12:38] VERSION="7 (Core)"
[2025-10-12 00:12:38] ID="centos"
[2025-10-12 00:12:38] ID_LIKE="rhel fedora"
[2025-10-12 00:12:38] VERSION_ID="7"
[2025-10-12 00:12:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:12:38] ANSI_COLOR="0;31"
[2025-10-12 00:12:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:12:38] HOME_URL="https://www.centos.org/"
[2025-10-12 00:12:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:12:38] 
[2025-10-12 00:12:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:12:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:12:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:12:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:12:38] 
[2025-10-12 00:12:38] 2025-10-12 04:11:44,531 | INFO     | ***************************************
[2025-10-12 00:12:38] 2025-10-12 04:11:45,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 00:12:38] 2025-10-12 04:11:45,171 | INFO     | sufficient remaining disk space (73432825856 B)
[2025-10-12 00:12:38] 2025-10-12 04:11:45,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:12:38] 2025-10-12 04:11:45,172 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:12:38] 2025-10-12 04:11:45,172 | INFO     | update_server=False
[2025-10-12 00:12:38] 2025-10-12 04:11:45,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:12:38] 2025-10-12 04:11:45,632 | INFO     | all data control threads have been joined
[2025-10-12 00:12:38] 2025-10-12 04:11:45,665 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 00:12:38] 2025-10-12 04:11:45,665 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 00:12:38] 2025-10-12 04:11:45,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:12:38] 2025-10-12 04:11:45,665 | INFO     | will abort loop
[2025-10-12 00:12:38] 2025-10-12 04:11:46,015 | INFO     | all payload control threads have been joined
[2025-10-12 00:12:38] 2025-10-12 04:11:46,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:12:38] 2025-10-12 04:11:46,167 | INFO     | all job control threads have been joined
[2025-10-12 00:12:38] 2025-10-12 04:11:46,178 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:46,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:12:38] 2025-10-12 04:11:46,587 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:46,631 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:46,637 | INFO     | [data] control thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:46,671 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:46,826 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,022 | INFO     | [payload] control thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,172 | INFO     | [job] control thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,604 | INFO     | [job] validate thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,604 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,606 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:12:38] 2025-10-12 04:11:47,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:47,698 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:48,350 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:48,634 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:11:50,145 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:12:38] 2025-10-12 04:12:15,927 | INFO     | PID=3823619 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:12:38] 2025-10-12 04:12:15,928 | INFO     | .. there are 45 such processes running
[2025-10-12 00:12:38] 2025-10-12 04:12:15,929 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:12:38] 2025-10-12 04:12:15,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:12:38] 2025-10-12 04:12:15,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:12:38] 2025-10-12 04:12:30,804 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:12:38] 2025-10-12 04:12:32,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608149141312)>', '<ExcThread(monitor, started 140607783671552)>']
[2025-10-12 00:12:38] 2025-10-12 04:12:33,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:12:38] 2025-10-12 04:12:33,028 | INFO     | [monitor] control thread has ended
[2025-10-12 00:12:38] 2025-10-12 04:12:37,450 | INFO     | all workflow threads have been joined
[2025-10-12 00:12:38] 2025-10-12 04:12:37,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:12:38] 2025-10-12 04:12:37,450 | INFO     | traces error code: 0
[2025-10-12 00:12:38] 2025-10-12 04:12:37,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:12:38] 2025-10-12 04:12:38,079 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:12:38] 2025-10-12 04:12:38,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:12:38] 2025-10-12 04:12:38,108 [wrapper] pilotpid: 3823619
[2025-10-12 00:12:38] 2025-10-12 04:12:38,115 [wrapper] Pilot exit status: 0
[2025-10-12 00:12:38] 2025-10-12 04:12:38,133 [wrapper] pandaids: 6838182452
[2025-10-12 00:12:38] 2025-10-12 04:12:38,249 [wrapper] cleanup supervisor_pilot  544246 3823620
[2025-10-12 00:12:38] 2025-10-12 04:12:38,256 [wrapper] Test setup, not cleaning
[2025-10-12 00:12:38] 2025-10-12 04:12:38,263 [wrapper] apfmon messages muted
[2025-10-12 00:12:38] 2025-10-12 04:12:38,280 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:12:38] 2025-10-12 04:12:38,300 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:12:38]  *** Error codes and diagnostics ***
[2025-10-12 00:12:38]     "exeErrorCode": 0,
[2025-10-12 00:12:38]     "exeErrorDiag": "",
[2025-10-12 00:12:38]     "pilotErrorCode": 0,
[2025-10-12 00:12:38]     "pilotErrorDiag": "",
[2025-10-12 00:12:38]  *** Listing of results directory ***
[2025-10-12 00:12:38] total 412104
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 03:01 queuedata.json
[2025-10-12 00:12:38] -rwx------. 1 boincer umatlas     36292 Oct 11 03:01 runpilot2-wrapper.sh
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:12:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:45 run_atlas
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:45 job.xml
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas 220016080 Oct 11 19:45 EVNT.46676267._002140.pool.root.1
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:45 start_atlas.sh
[2025-10-12 00:12:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:45 shared
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 19:45 input.tar.gz
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:45 boinc_lockfile
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:45 pandaJob.out
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas    975528 Oct 11 19:45 agis_schedconf.cvmfs.json
[2025-10-12 00:12:38] drwx------. 5 boincer umatlas      4096 Oct 11 19:46 pilot3
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas 193160081 Oct 12 00:10 HITS.46676269._053321.pool.root.1
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas       531 Oct 12 00:10 boinc_task_state.xml
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 00:11 init_data.xml
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas      1056 Oct 12 00:11 memory_monitor_summary.json
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas    490647 Oct 12 00:11 log.46676269._053321.job.log.tgz.1
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas      7829 Oct 12 00:11 heartbeat.json
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas        95 Oct 12 00:12 pilot_heartbeat.json
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 00:12 boinc_mmap_file
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas        28 Oct 12 00:12 wrapper_checkpoint.txt
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas      5010 Oct 12 00:12 pilotlog.txt
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas   1963330 Oct 12 00:12 log.46676269._053321.job.log.1
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas       357 Oct 12 00:12 output.list
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas       620 Oct 12 00:12 runtime_log
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas   2478080 Oct 12 00:12 result.tar.gz
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 00:12 runtime_log.err
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas       656 Oct 12 00:12 oUjKDm8miR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgjfNDmurvMXm.diag
[2025-10-12 00:12:38] -rw-r--r--. 1 boincer umatlas     21192 Oct 12 00:12 stderr.txt
[2025-10-12 00:12:38] HITS file was successfully produced:
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas 193160081 Oct 12 00:10 shared/HITS.pool.root.1
[2025-10-12 00:12:38]  *** Contents of shared directory: ***
[2025-10-12 00:12:38] total 406500
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas 220016080 Oct 11 19:45 ATLAS.root_0
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:45 start_atlas.sh
[2025-10-12 00:12:38] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 19:45 input.tar.gz
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas 193160081 Oct 12 00:10 HITS.pool.root.1
[2025-10-12 00:12:38] -rw-------. 1 boincer umatlas   2478080 Oct 12 00:12 result.tar.gz
00:12:40 (3819039): run_atlas exited; CPU time 41010.380943
00:12:40 (3819039): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN