Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:33:54 (27759): wrapper (7.7.26015): starting
19:33:54 (27759): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:33:54] Arguments: --nthreads 8
[2025-10-11 19:33:54] Threads: 8
[2025-10-11 19:33:54] Checking for CVMFS
[2025-10-11 19:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:33:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:33:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:33:55] 2.11.2.0 2856 79145 82408 151600 2 57 14021660 20275200 1 130560 0 36138086 99.988 2489692 39963 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:33:55] CVMFS is ok
[2025-10-11 19:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:33:55] Further information can be found at the LHC@home message board.
[2025-10-11 19:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:33:55] Checking for apptainer binary...
[2025-10-11 19:33:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:33:55] Running /usr/bin/apptainer --version
[2025-10-11 19:33:55] apptainer version 1.3.2-1.el7
[2025-10-11 19:33:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:33:56] c-115-6.aglt2.org
[2025-10-11 19:33:56] apptainer works
[2025-10-11 19:33:57] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:33:57] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:33:57] Starting ATLAS job with PandaID=6838775117
[2025-10-11 19:33:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:29:23 (13147): wrapper (7.7.26015): starting
21:29:23 (13147): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:29:23] Arguments: --nthreads 8
[2025-10-11 21:29:23] Threads: 8
[2025-10-11 21:29:23] This job has been restarted, cleaning up previous attempt
[2025-10-11 21:29:24] Checking for CVMFS
[2025-10-11 21:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:29:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:29:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:29:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:29:24] 2.11.2.0 2856 79260 84932 151602 3 9 14129782 20275200 1 130560 0 36215782 99.988 2492294 39968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:29:24] CVMFS is ok
[2025-10-11 21:29:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:29:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:29:24] Further information can be found at the LHC@home message board.
[2025-10-11 21:29:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:29:24] Checking for apptainer binary...
[2025-10-11 21:29:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:29:24] Running /usr/bin/apptainer --version
[2025-10-11 21:29:24] apptainer version 1.3.2-1.el7
[2025-10-11 21:29:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:29:26] c-115-6.aglt2.org
[2025-10-11 21:29:26] apptainer works
[2025-10-11 21:29:26] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:29:26] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:29:26] Starting ATLAS job with PandaID=6838775117
[2025-10-11 21:29:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:21:00]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:21:00] 2025-10-12 03:20:26,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:21:00] 2025-10-12 03:20:26,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:21:00] 2025-10-12 03:20:26,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:21:00] 2025-10-12 03:20:26,573 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:21:00] 2025-10-12 03:20:26,573 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,574 | INFO     | sum of deviations: -8150951760.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,574 | INFO     | mean x: 1760235909.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,574 | INFO     | mean y: 2526664.4495412842
[2025-10-11 23:21:00] 2025-10-12 03:20:26,574 | INFO     | -- intersect: 35734568738.08762
[2025-10-11 23:21:00] 2025-10-12 03:20:26,575 | INFO     | intersect: 35734568738.08762
[2025-10-11 23:21:00] 2025-10-12 03:20:26,575 | INFO     | chi2: 2.3078934422103643
[2025-10-11 23:21:00] 2025-10-12 03:20:26,575 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | sum of deviations: -429602382.0000009
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | mean x: 1760235756.5
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | mean y: 2548208.1923076925
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | -- intersect: 2170747670.782592
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | intersect: 2170747670.782592
[2025-10-11 23:21:00] 2025-10-12 03:20:26,576 | INFO     | chi2: 1.547562197527381
[2025-10-11 23:21:00] 2025-10-12 03:20:26,577 | INFO     | current chi2=1.547562197527381 (change=32.94481585574345 %)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,577 | INFO     | sum of square deviations: 300842850.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,577 | INFO     | sum of deviations: -65880731.999998465
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | mean x: 1760235604.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | mean y: 2549366.5555555555
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | -- intersect: 388018424.8495434
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | intersect: 388018424.8495434
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | chi2: 1.5494230990245754
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | current chi2=1.5494230990245754 (change=-0.12024728312488375 %)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,578 | INFO     | right removable region: 98
[2025-10-11 23:21:00] 2025-10-12 03:20:26,579 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,579 | INFO     | sum of deviations: -23700145841.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,579 | INFO     | mean x: 1760236061.5
[2025-10-11 23:21:00] 2025-10-12 03:20:26,579 | INFO     | mean y: 2570611.403846154
[2025-10-11 23:21:00] 2025-10-12 03:20:26,580 | INFO     | -- intersect: 119617020001.59949
[2025-10-11 23:21:00] 2025-10-12 03:20:26,580 | INFO     | intersect: 119617020001.59949
[2025-10-11 23:21:00] 2025-10-12 03:20:26,580 | INFO     | chi2: 0.9035350527637379
[2025-10-11 23:21:00] 2025-10-12 03:20:26,580 | INFO     | current chi2=0.9035350527637379 (change=60.85022660758612 %)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,580 | INFO     | sum of square deviations: 300842850.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,581 | INFO     | sum of deviations: -21194003358.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,581 | INFO     | mean x: 1760236214.0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,581 | INFO     | mean y: 2562599.5454545454
[2025-10-11 23:21:00] 2025-10-12 03:20:26,581 | INFO     | -- intersect: 124009007261.23245
[2025-10-11 23:21:00] 2025-10-12 03:20:26,581 | INFO     | intersect: 124009007261.23245
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | chi2: 0.9045571296110169
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | current chi2=0.9045571296110169 (change=-0.11311977815942147 %)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | left removable region: 20
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | sum of square deviations: 147126479.5
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | sum of deviations: -7329785132.000002
[2025-10-11 23:21:00] 2025-10-12 03:20:26,582 | INFO     | mean x: 1760236183.5
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | mean y: 2567736.641025641
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | -- intersect: 87696863491.38127
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | intersect: 87696863491.38127
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | chi2: 0.08284639674351607
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | -- intersect: 87696863491.38127
[2025-10-11 23:21:00] 2025-10-12 03:20:26,583 | INFO     | current memory leak: -49.82 B/s (using 78 data points, chi2=0.08)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | could have reported an average CPU frequency of 2114 MHz (7 samples)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | ..............................
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | . Timing measurements:
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | . get job = 0 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | . initial setup = 1 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | . payload setup = 8 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,584 | INFO     | . stage-in = 0 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,585 | INFO     | . payload execution = 6605 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,585 | INFO     | . stage-out = 2 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,585 | INFO     | . log creation = 0 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,585 | INFO     | ..............................
[2025-10-11 23:21:00] 2025-10-12 03:20:26,789 | INFO     | 
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | job summary report
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | --------------------------------------------------
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | PanDA job id: 6838775117
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | task id: 46676269
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | errors: (none)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | pilot state: finished 
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | transexitcode: 0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | exeerrorcode: 0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | exeerrordiag: 
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | exitcode: 0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,791 | INFO     | exitmsg: OK
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | cpuconsumptiontime: 48964 s
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | nevents: 400
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | neventsw: 0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | pid: 23839
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | pgrp: 23839
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | corecount: 8
[2025-10-11 23:21:00] 2025-10-12 03:20:26,792 | INFO     | event service: False
[2025-10-11 23:21:00] 2025-10-12 03:20:26,793 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6614: 2376232, 6617: 2385230, 6620: 2385286, 6626: 2385608}
[2025-10-11 23:21:00] 2025-10-12 03:20:26,793 | INFO     | --------------------------------------------------
[2025-10-11 23:21:00] 2025-10-12 03:20:26,793 | INFO     | 
[2025-10-11 23:21:00] 2025-10-12 03:20:26,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:21:00] 2025-10-12 03:20:26,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:21:00] 2025-10-12 03:20:26,826 | INFO     | job 6838775117 has completed (purged errors)
[2025-10-11 23:21:00] 2025-10-12 03:20:26,826 | INFO     | overall cleanup function is called
[2025-10-11 23:21:00] 2025-10-12 03:20:27,835 | INFO     | --- collectZombieJob: --- 10, [23839]
[2025-10-11 23:21:00] 2025-10-12 03:20:27,835 | INFO     | zombie collector waiting for pid 23839
[2025-10-11 23:21:00] 2025-10-12 03:20:27,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:21:00] 2025-10-12 03:20:27,835 | INFO     | collected zombie processes
[2025-10-11 23:21:00] 2025-10-12 03:20:27,836 | INFO     | will attempt to kill all subprocesses of pid=23839
[2025-10-11 23:21:00] 2025-10-12 03:20:27,921 | INFO     | process IDs to be killed: [23839] (in reverse order)
[2025-10-11 23:21:00] 2025-10-12 03:20:27,978 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:21:00] 2025-10-12 03:20:27,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:21:00] 2025-10-12 03:20:27,982 | INFO     | did not find any defunct processes belonging to 23839
[2025-10-11 23:21:00] 2025-10-12 03:20:27,985 | INFO     | did not find any defunct processes belonging to 23839
[2025-10-11 23:21:00] 2025-10-12 03:20:27,985 | INFO     | ready for new job
[2025-10-11 23:21:00] 2025-10-12 03:20:27,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:21:00] 2025-10-12 03:20:27,987 | INFO     | ***************************************
[2025-10-11 23:21:00] 2025-10-12 03:20:27,987 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:21:00] 2025-10-12 03:20:27,987 | INFO     | ***************************************
[2025-10-11 23:21:00] 2025-10-12 03:20:27,987 | INFO     | 
[2025-10-11 23:21:00] 2025-10-12 03:20:27,988 | INFO     | architecture information:
[2025-10-11 23:21:00] 2025-10-12 03:20:27,989 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:21:00] 2025-10-12 03:20:28,007 | INFO     | cat /etc/os-release:
[2025-10-11 23:21:00] NAME="CentOS Linux"
[2025-10-11 23:21:00] VERSION="7 (Core)"
[2025-10-11 23:21:00] ID="centos"
[2025-10-11 23:21:00] ID_LIKE="rhel fedora"
[2025-10-11 23:21:00] VERSION_ID="7"
[2025-10-11 23:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:21:00] ANSI_COLOR="0;31"
[2025-10-11 23:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:21:00] HOME_URL="https://www.centos.org/"
[2025-10-11 23:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:21:00] 
[2025-10-11 23:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:21:00] 
[2025-10-11 23:21:00] 2025-10-12 03:20:28,008 | INFO     | ***************************************
[2025-10-11 23:21:00] 2025-10-12 03:20:28,511 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:21:00] 2025-10-12 03:20:28,533 | INFO     | sufficient remaining disk space (18595446784 B)
[2025-10-11 23:21:00] 2025-10-12 03:20:28,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:21:00] 2025-10-12 03:20:28,534 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:21:00] 2025-10-12 03:20:28,534 | INFO     | update_server=False
[2025-10-11 23:21:00] 2025-10-12 03:20:28,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:21:00] 2025-10-12 03:20:28,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:21:00] 2025-10-12 03:20:28,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:21:00] 2025-10-12 03:20:28,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:21:00] 2025-10-12 03:20:28,778 | INFO     | aborting loop
[2025-10-11 23:21:00] 2025-10-12 03:20:29,432 | INFO     | all payload control threads have been joined
[2025-10-11 23:21:00] 2025-10-12 03:20:29,536 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:29,540 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:29,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:29,621 | INFO     | all data control threads have been joined
[2025-10-11 23:21:00] 2025-10-12 03:20:29,695 | INFO     | all job control threads have been joined
[2025-10-11 23:21:00] 2025-10-12 03:20:29,783 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:29,835 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:29,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,438 | INFO     | [payload] control thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,570 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,571 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,626 | INFO     | [data] control thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,701 | INFO     | [job] control thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,840 | INFO     | [job] validate thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,871 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:30,888 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:31,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:21:00] 2025-10-12 03:20:35,578 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:39,258 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:21:00] 2025-10-12 03:20:40,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:21:00] 2025-10-12 03:20:54,421 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:21:00] 2025-10-12 03:20:55,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739600275264)>', '<ExcThread(monitor, started 139738438694656)>']
[2025-10-11 23:21:00] 2025-10-12 03:20:58,046 | INFO     | PID=17231 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:21:00] 2025-10-12 03:20:58,046 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:21:00] 2025-10-12 03:20:58,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:21:00] 2025-10-12 03:20:58,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:21:00] 2025-10-12 03:20:58,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:21:00] 2025-10-12 03:20:58,047 | INFO     | [monitor] control thread has ended
[2025-10-11 23:21:00] 2025-10-12 03:21:00,349 | INFO     | all workflow threads have been joined
[2025-10-11 23:21:00] 2025-10-12 03:21:00,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:21:00] 2025-10-12 03:21:00,382 | INFO     | traces error code: 0
[2025-10-11 23:21:00] 2025-10-12 03:21:00,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:21:00] 2025-10-12 03:21:00,535 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:21:00] 2025-10-12 03:21:00,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:21:00] 2025-10-12 03:21:00,545 [wrapper] pilotpid: 17231
[2025-10-11 23:21:00] 2025-10-12 03:21:00,549 [wrapper] Pilot exit status: 0
[2025-10-11 23:21:00] 2025-10-12 03:21:00,568 [wrapper] pandaids: 6838775117 6838775117
[2025-10-11 23:21:00] 2025-10-12 03:21:00,620 [wrapper] cleanup supervisor_pilot 31741 17232
[2025-10-11 23:21:00] 2025-10-12 03:21:00,625 [wrapper] Test setup, not cleaning
[2025-10-11 23:21:00] 2025-10-12 03:21:00,629 [wrapper] apfmon messages muted
[2025-10-11 23:21:00] 2025-10-12 03:21:00,634 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:21:00] 2025-10-12 03:21:00,638 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:21:00]  *** Error codes and diagnostics ***
[2025-10-11 23:21:00]     "exeErrorCode": 0,
[2025-10-11 23:21:00]     "exeErrorDiag": "",
[2025-10-11 23:21:00]     "pilotErrorCode": 0,
[2025-10-11 23:21:00]     "pilotErrorDiag": "",
[2025-10-11 23:21:00]  *** Listing of results directory ***
[2025-10-11 23:21:00] total 624708
[2025-10-11 23:21:00] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 14:34 queuedata.json
[2025-10-11 23:21:00] -rwx------ 1 boincer umatlas     36292 Oct 11 14:35 runpilot2-wrapper.sh
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas       100 Oct 11 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:21:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 19:33 run_atlas
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas       105 Oct 11 19:33 job.xml
[2025-10-11 23:21:00] -rw-r--r-- 3 boincer umatlas 221515960 Oct 11 19:33 EVNT.46676267._002524.pool.root.1
[2025-10-11 23:21:00] -rw-r--r-- 3 boincer umatlas 221515960 Oct 11 19:33 ATLAS.root_0
[2025-10-11 23:21:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:33 start_atlas.sh
[2025-10-11 23:21:00] drwxrwx--x 2 boincer umatlas      4096 Oct 11 19:33 shared
[2025-10-11 23:21:00] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 19:33 input.tar.gz
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas         0 Oct 11 19:33 boinc_lockfile
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 21:29 pandaJob.out
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas    975496 Oct 11 21:29 agis_schedconf.cvmfs.json
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 23:19 init_data.xml
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas 190180785 Oct 11 23:19 HITS.46676269._062805.pool.root.1
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:19 boinc_task_state.xml
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas        96 Oct 11 23:20 pilot_heartbeat.json
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas      1062 Oct 11 23:20 memory_monitor_summary.json
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas   1560580 Oct 11 23:20 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas    346416 Oct 11 23:20 log.46676269._062805.job.log.tgz.1
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas      7846 Oct 11 23:20 heartbeat.json
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas        28 Oct 11 23:20 wrapper_checkpoint.txt
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:20 boinc_mmap_file
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas      4818 Oct 11 23:21 pilotlog.txt
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas    942442 Oct 11 23:21 log.46676269._062805.job.log.1
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas       357 Oct 11 23:21 output.list
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:21 runtime_log
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas   1310720 Oct 11 23:21 result.tar.gz
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas       782 Oct 11 23:21 TVaKDmybtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPHhNDmCe6tFo.diag
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas      8783 Oct 11 23:21 runtime_log.err
[2025-10-11 23:21:00] -rw-r--r-- 1 boincer umatlas     22986 Oct 11 23:21 stderr.txt
[2025-10-11 23:21:00] HITS file was successfully produced:
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas 190180785 Oct 11 23:19 shared/HITS.pool.root.1
[2025-10-11 23:21:00]  *** Contents of shared directory: ***
[2025-10-11 23:21:00] total 403912
[2025-10-11 23:21:00] -rw-r--r-- 3 boincer umatlas 221515960 Oct 11 19:33 ATLAS.root_0
[2025-10-11 23:21:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:33 start_atlas.sh
[2025-10-11 23:21:00] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 19:33 input.tar.gz
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas 190180785 Oct 11 23:19 HITS.pool.root.1
[2025-10-11 23:21:00] -rw------- 1 boincer umatlas   1310720 Oct 11 23:21 result.tar.gz
23:21:02 (13147): run_atlas exited; CPU time 48964.911744
23:21:02 (13147): called boinc_finish(0)

</stderr_txt>
]]>

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